Girardinichthys multiradiatus (darkedged splitfin): 124864966
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Entry
124864966 CDS
T08099
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04120
Ubiquitin mediated proteolysis
gmu04137
Mitophagy - animal
gmu04144
Endocytosis
gmu04340
Hedgehog signaling pathway
gmu04350
TGF-beta signaling pathway
gmu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124864966
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124864966
04350 TGF-beta signaling pathway
124864966
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124864966
04137 Mitophagy - animal
124864966
09144 Cellular community - eukaryotes
04520 Adherens junction
124864966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124864966
04121 Ubiquitin system [BR:
gmu04121
]
124864966
03029 Mitochondrial biogenesis [BR:
gmu03029
]
124864966
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124864966
Membrane trafficking [BR:
gmu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124864966
Autophagy
Mitophagy
Other mitophagy associated proteins
124864966
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
HECT type E3
124864966
Mitochondrial biogenesis [BR:
gmu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
124864966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
124864966
NCBI-ProteinID:
XP_047215868
LinkDB
All DBs
Position
Y:13603748..13669157
Genome browser
AA seq
768 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
SPNDSDTVRGQIVVSLQSRDRIGSGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCIVDENTPVSTNGATPTTALPASDQRAQERRVRSQRH
RNYMSRTHLHMHPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELGP
LPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSSNGSRGGSESQNVSRQN
QTKDQAQQALVSPGQLLEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVSRE
EIFEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYS
RDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLD
DMESVDPDLHNSLVWILENDITGVLDHTFCVEHNAYGEILQHELKPNGKSIPVTQDNKKE
YVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDINDWKSN
TRLKHCTPDTHIVKWFWKAVEFFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTI
HQIDASTNNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagtccggcggaatggccccgtcaaactgagattaacagtcctgtgt
gccaaaaacctggcaaagaaagatttcttccgcctccctgatccttttgccaaggtagtc
gtggatggttcaggccagtgccactcaacagacactgtgaggaatacgctcgaccccaag
tggaaccaacactatgatctgtacatcgggaagtcagattcaatcaccatcagtgtgtgg
aaccacaaaaagattcataagaagcaaggggctgggttcctgggctgtgttcgccttctg
tctaacgccatcaaccgccttaaagacacaggctaccagagactagacttgaacaagttg
agccccaacgacagtgacacagtcagggggcagattgtagtgagccttcagtcgagggac
cgcatagggtcaggaggtcccgtggtggactgcagtcggctgtttgacaatgatcttcca
gatggctgggaggagagaaggactgcatctggacgaatccagtacttgaaccacatcaca
cgcaccacacagtgggagaggccaaccaggcctgcatcagagtattccagccctggacgg
ccactcagctgcattgtagatgagaacacccctgttagcacaaatggcgccacgcccacc
acagcattacctgccagtgaccagcgggcccaggagaggcgggtgcgatcgcagcggcac
cgcaactatatgagcagaacccacctgcacatgcacccagaccttcctgagggatacgag
caaaggacaacgcagcaaggtcaagtttacttcctccacactcagacaggtgtcagcaca
tggcatgaccctagggtacccagagacctgagcaatgtgaactgtgaggaacttggtcct
ctaccaccaggatgggagatccggaacaccgccacagggagggtttacttcgttgaccac
aacaaccgaaccacgcagttcacagacccacgcctctcggctaacctgcatctagttcta
aatccaagttccaatggttctcgaggaggcagcgagagtcaaaacgtcagtcgtcagaac
cagacaaaggatcaggcccagcaggctctggtgtcccccggtcagctcctggaagaggca
gagtgtctcaccgtgcccaaatacaagagagacctcgttcaaaagcttaagatcctgcgt
caggaactgtcccagcagcagcctcaggccggccactgtcgcattgaggtgtcccgcgaa
gagatctttgaggagtcatatcggcaggtgatgaagatgaggccaaaggacctatggaaa
cggttaatggtgaagttcagaggtgaagaaggcctcgactatggaggagtagccagggaa
tggctctatctgctgtcgcatgagatgctgaacccatactacggcctgtttcagtactcc
cgcgatgacatctacacactgcagatcaacccggattctgctgtaaatcctgagcatttg
tcgtactttcacttcgtcggccgcattatggggatggctgtgttccatggccactacatt
gacgggggttttactctgcccttctacaaacagctgctgggtaaacccatcaccctggat
gacatggagtctgtagatcctgacctgcacaacagcctggtttggatcctggaaaatgac
attacaggtgtgctggaccacaccttctgtgtagagcacaatgcgtatggagaaatcctc
cagcatgaactcaagccgaatggtaaaagcatccctgtcacacaggacaacaagaaggag
tatgtccgcctctacgtcaactggcgcttcctgcgaggcattgaagcccagttcttggcc
ctgcaaaagggctttaatgaggtcatccctcaacacctgctcaaagctttcgatgagaag
gagctggagctgatcgtctgcggcctgggtaaaatagacatcaacgactggaagtccaac
acgcggctgaagcactgcactccggacacccacattgttaaatggttctggaaagctgta
gagtttttcgacgaagagcgcagagcccgactgctgcagtttgtcacaggttcctccaga
gttcctctgcaaggttttaaggcccttcaaggtgctgctggaccacgactcttcactata
caccagattgatgccagcacgaacaacctgcccaaagcccacacctgctttaaccgaatc
gacattcctccctatgaaagctatgacaaattgtatgacaagttacttactgccattgaa
gagacgtgtggctttgctgtggagtga
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