Girardinichthys multiradiatus (darkedged splitfin): 124865272
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Entry
124865272 CDS
T08099
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124865272
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
124865272
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
124865272
NCBI-ProteinID:
XP_047216188
LinkDB
All DBs
Position
3:37561370..37571453
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AA seq
621 aa
AA seq
DB search
MDQVLPKKVSDSDLLEPESEELQLRVDFFRKLGYSTAEVKAALRKLGLSTDTNAVLGELV
RNRTTSTSPCVSDSDERSTDLKDPLLPPSWDIGSYRIAPQPGDQNTVDSELRPIVIDGSN
VAMSHGNKEVFSCRGIELAVNFFLDRGHNNITVFVPSWRKELPRADAPITDQHILSKLEK
QKILVFTPSRRVGGKRVVCYDDRFIVKLAYESDGAIVSNDTYRDLQGERPEWKKCIEERL
LMYSFVNDKFMPPDDPLGRHGPNLDNFLRKTPLPMEQKKLPCPYDKKCTYGIKCKYYHPE
RANHSYLSLADELREKAHISTVKEGRKARSSVNYPQSEPEPSHPRHTHLPWDQHSSSFPG
HISENELLHWKDFRKSPNQMPCSVNGGNCPKEYPGLHFMSNLYYPNMSLEYLDSGFGSAE
SHYSDMSPPLSSTYRLGPQHQSAHDRPQPASVHVEKNNTSHCGKCCSYPLQQHHSNIHCS
SQPIYNTYLPNMLPHSVHQQQSLPAHFNDTAAPHLHHKYWSDPFQGAPQARTSCPAPSLV
CPSHCNNSCCSYKNHQYKAWGQHQQPPPPSAAFNQQRSEMRKKLQAIFNPHQVDMVMEMF
PYLMDAEKLAAEILNMKAQGI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggtacttcccaagaaagtttctgactcggatctgctggaaccagaaagtgag
gaactccagcttagagtggacttcttccgaaaactggggtactccacagcagaggtgaaa
gctgctttgagaaagctgggcctaagcactgacaccaatgcagtgctcggggagcttgtg
aggaacagaaccaccagcacatctccctgtgtttccgacagtgatgagaggagcacagat
ctgaaagatccactgctgccccccagctgggacattgggtcctacagaattgcaccacaa
cctggagaccaaaacactgtagactcggagctgaggcctattgttattgacggcagcaat
gttgccatgagtcacggcaacaaggaagtgttttcgtgccggggcatagagttggcagtg
aatttcttcctggacagaggccataataatattactgtgtttgttccctcttggcgcaag
gagttgccccgagctgatgcccctataacagatcaacacattctgtcaaagcttgaaaaa
cagaaaatattggtcttcacaccatcacgtcgcgttggtggcaagcgagtcgtttgttat
gatgaccgcttcattgtcaaactggcatatgagtcagatggagcaattgtgtccaacgac
acctaccgagatcttcaaggagaaaggcctgagtggaaaaaatgcattgaggagaggctc
ctcatgtactcatttgttaatgacaagttcatgcctccagatgatcctttgggtcgacat
ggacctaaccttgacaactttcttaggaaaacacccctgcctatggagcagaagaaacta
ccttgtccttatgataaaaagtgcacttatggcatcaagtgtaagtattaccatcctgag
cgggcaaaccactcctatctgtctctggctgatgaattgagagagaaagcacacatttcc
actgtaaaagaggggagaaaggcaagatcatcagtcaactatcctcagtctgaacctgag
ccttcccatcctcgacacacacatctcccgtgggatcagcacagttcttcatttcctggt
cacattagtgaaaatgagctactgcactggaaagactttagaaaaagccccaaccaaatg
ccgtgttcagtaaatggaggaaactgtccaaaagaatatcctgggctgcactttatgtca
aatctttattatcccaacatgtctctggaatatttggattctggttttggctctgctgag
agccactactctgacatgtcaccacccctcagcagcacctacagacttgggcctcagcat
cagagtgcccatgacagaccccaacctgcctcagttcatgtggagaaaaataataccagt
cattgtggcaaatgctgttcctatcctcttcagcaacatcacagcaacattcactgcagc
agtcaacccatctacaacacttaccttccaaatatgctcccacacagtgtacatcagcaa
caaagcctgcccgcccattttaatgacactgcggccccccatcttcatcataaatactgg
tcagatccctttcagggtgcaccccaagccagaacgtcatgccctgcaccctctttggtc
tgtccttcacactgtaacaactcctgctgctcctataagaaccatcagtacaaagcctgg
gggcaacatcaacaaccaccaccaccttctgctgcattcaatcaacagaggtcagaaatg
cgcaagaaactgcaagccatcttcaacccacaccaagtggatatggtcatggagatgttc
ccgtacctgatggatgctgaaaaactagctgcagaaatattaaacatgaaagctcaaggg
atctga
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