Girardinichthys multiradiatus (darkedged splitfin): 124865360
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Entry
124865360 CDS
T08099
Symbol
cnot3a
Name
(RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124865360 (cnot3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124865360 (cnot3a)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124865360 (cnot3a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124865360 (cnot3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
124865360
NCBI-ProteinID:
XP_047216327
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All DBs
Position
3:29551784..29565873
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AA seq
909 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIDELKRLIERHRYHI
RMLETILRMLDNDSIPVDAIQKIKDDVEYYIDSCQDPDFEENEFLYDDLDLDDIPPALVA
TSPSGNVEDDLYLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSQVSQSPVK
NGAPSLQSSFSSSATSGSSSSSSLSMASVVGGIPAVSTSSSLIGSFSSAVQQHQHQSAQQ
QQQSQPSNQQPPQTKPSVPSNNTPSPPSNPLPPLSMCPSLSTPSTPSSSAPNSQSSSGSS
LASNLGLGMGLDLRKSGISGTSSANQMPSLGLTGHSTPLNTIAGLIPGSTSALYAHAAAP
GGLGLSSTTQSSVLPESSTSISNSSSSSITTNGAGSGLSLLGSSPVHNSLSSSILGLVPG
QSVVPATSQVPPSSASSTPGAVGMMVGNGGSAGVVGVNAAPARPPSGLKQNGSPSYSAVV
AESSTESALSTPSQSQSSQTSSLSSSTSQPMDNGPSLISSITLPPSSPSPSFSDSTPGGG
SLLNGPHSYPQASEGLKIFGHLSAGRSQAPEPLSSLKAMAERAALGSGLDGEISSLHVTD
RGLNDIFSGSSAAPGTPAAPQPSVSEVSIPPSLGVCPLGPTPLPKDQLYQQAMQESAWTH
MPHPSDSERIRQYLMRNPCPTLPYHHQVPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQ
YLSAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEY
RYLEDRDLQ
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaactacaaggtgaaattgacagatgtttgaaaaaagtagcagaa
ggtgttgaacagtttgaggacatctggcaaaaactccacaatgcagctaatgcaaaccag
aaggaaaaatatgaggctgacctcaagaaagagattaaaaaactacagcgattgagagat
caaataaaaacatgggtggcctcgaacgagatcaaagacaaacggcagctagtagagaac
cgaaaactaatagagacgcaaatggaaaggttcaaagtggtggaacgtgaaacaaaaaca
aaagcctactctaaagaaggcttagggcttgctcagaaggtggatccagctcagagggaa
aaggaagaaacgggacagtggctaacaaatacaatagatacactaaatatgcaggtggat
cagttcgagagtgaggtggaatctctttcagtccagacacgaaagaagaagggcgataaa
gagaagcaagatcgtattgatgaactcaagcggttgattgagagacatagataccacatt
cgcatgttggagactattttacggatgctggacaatgactctataccggtggatgctatc
cagaagatcaaggatgatgttgagtactacatagattcctgtcaagacccggactttgag
gagaatgagttcctgtatgacgacttagacctggacgacatccctccggcattagttgcc
acatccccatcaggcaatgtggaagatgacttgtatctccactccagcagcactcccacc
tccacaacatcatcttcgcccatccctccatctccggccacttgcactgctgagaactcg
gaggacgataagaaaaggggacggtcgacagacagtcaagttagtcagtcgcctgtgaag
aacggtgccccatccttgcaatcttccttctcttcttctgccacttctgggtcctcttct
tcctcctccctctccatggcgagtgttgtcggaggcattcccgcagtttccaccagcagc
agtcttataggaagcttcagcagcgcggtgcagcaacatcagcatcaatctgcacaacag
cagcaacaatctcaaccatcgaatcagcagccacctcagacaaaaccttcagtcccatca
aacaacacccccagcccacctagtaacccactacccccattatccatgtgcccctcactt
tccacgcccagcacgcccagttcatcagctcccaactctcagtcctcctctgggtctagc
ctggcatccaatctggggctggggatgggattggatttaagaaaaagtggcattagcggg
accagcagtgccaaccagatgccaagtttaggcttgactggccactccactcctttaaac
acaatagcaggcctaatacctggttccacatcggccctttacgcgcacgcggcagcacct
gggggcctgggtctgagcagcaccactcagtccagcgttttgcctgagagcagcacttcc
atctccaattcaagctccagcagcatcaccaccaacggagcggggtcagggcttagttta
ctgggctctagcccggtccacaactctctgagtagcagtattttgggtctggtccctggg
cagagtgtggtccctgccacatcacaggtgcccccgagttctgccagctctacccctgga
gcagttggcatgatggtaggaaacggagggagcgccggtgtagttggagtgaatgccgct
cctgccagaccaccaagtggactgaagcaaaacggaagcccaagttacagtgctgtagtg
gcagagagttccacagaatcagctctaagcacaccaagccagtcacaaagcagccaaacc
tcatctctcagttcctcaacaagccagccgatggacaatggccccagcttaattagctcc
atcacactgcccccgagctctccctctccctccttctcagacagcacaccgggcggaggg
agtctcctcaacggaccccactcgtatccgcaggcctctgagggcctcaagatatttggt
catctctcagcaggaagatcgcaggctccagagcccctcagctctctgaaggcgatggct
gagagagcagcgctgggatcaggattagacggagagatttccagcctgcatgtaaccgac
agaggtctgaacgatatcttctctggttcatcggcagcgcccggcacacccgccgctcct
cagccgtccgtgtcggaggtcagcatccccccctcactcggggtctgtccgttgggccca
acccctctccccaaagaccagctttaccagcaggcgatgcaggagtctgcgtggacacac
atgccacacccttctgactctgagaggatcaggcaatacctgatgaggaatccatgccct
actttgccataccaccatcaagtaccaccgcaccactctgactccatagagttctaccag
agactgtccacagaaacgctcttcttcatcttctactacctggagggcactaaggctcag
tatctgtctgccaaggcactaaaaaaacagtcgtggaggtttcacaccaagtacatgatg
tggttccagaggcacgaagaacccaagacgatcaccgatgagttcgaacagggcacttac
atttactttgactatgagaaatggggccagaggaagaaagaggggttcaccttcgagtac
aggtacctcgaggacagagacttgcagtga
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