KEGG   Girardinichthys multiradiatus (darkedged splitfin): 124865398
Entry
124865398         CDS       T08099                                 
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
gmu  Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:gmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gmu03400]
    124865398 (mdc1)
DNA repair and recombination proteins [BR:gmu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    124865398 (mdc1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT
Other DBs
NCBI-GeneID: 124865398
NCBI-ProteinID: XP_047216382
LinkDB
Position
3:31872573..31887780
AA seq 1915 aa
MDATQAIRDSILESEEEENEEENQNERGKPLAKLCILRNPHIPEKELPLFLGDNILGRDP
NLCTLQLLAPSVSKQHATVSISVYRRRGRDSEVDTEALVWDLGSMNGTRRGRLKLTPNVR
YALSEGDGLILGNIPCRYVSSRVDSPSSLGDVGTSLGRHSEVNTRLSDSSDSKRDDVDTE
GKECLKSNTKATRTPVTGGCLSFEQTPIQPKKTLVPESDSDSESERGGRGDRKQKTIVSD
SDSHKSSPSSNAFLSPQNKVVPESEDESPITPSSSNRNGSNRHVSLSIEKTNVDLGQQRL
NQNNSPAFVENGEEGDEGAANGGTYSEESGKNVKRQISKSLKKGSESPTSTSKVYRDAIP
EFNLDSDTDVEGGDEEVVPAGQSDQPPSTILPHMDNDTDVDENISDKAPKTLPSTDETTK
PSHVAAGFQLEGMITDSDTDVDDDATVTSKAILFQGVHTADSAPPVQSGDFHLDSDTDLD
EKEDGGTGAKRENPKIDEALDKSDKPTPTAPHNLHPDSDICDEVVSDPYVAEAGRADLDI
LSDSDTDLEEDSHPAIPAAKNLSVFSAAASGALKPDYDADTDVDEPLVPQAGEEGNPGDL
RMGSDTDVEDEEANLGEAGESQIPHLRRENTPRSLVPVLQNCSTPVQLSEGEVEQMETQA
FTSPTSDAEDCGFYAVAETQPFILQTRDCYKGLNPNQASVLESSAVEPEDQSMRGDSFQL
EVSDSSHLQGELRALTMENTQAYVSVDVGANLEDTQAYTEKTSAENDSNLESTQPYGEDE
EPARCSEMSIKEGCVDLAFEATQAYFSEFYDEGSDEVERQDSARTESVASVCSSALALAE
TQLMSSSVESNNPVCSIERVKTRVQNETEEHPEKHITEAQSVAQTQPMYTASDEESDIEG
LSAESLQPAKVERQPITPSALSLAETQPVHVSSDETQPMELCEDNENNGEDSEVLRPRKR
KAKQLHIDNEESQQHTNSSNQSAETQPMNSSEGDDDSDSMPSLRKRKAKPLQLEDETQSL
AGSQVSAAESQPSATHEEEQSSKDFISAEKRKANPLDIEDEQIISEAAAGLTSEDGETQP
MAACKDEGLPERETKALPLPAAGVSAVEAEAEGRDRKNDNESMTCARKRKSKRLHLEEEE
TQPITVSEVSASRRKTAETKVLPSAKERREQTKSENDSNQDKAKRDQCRRGRRNTRKQDK
HDEEDKNRSAENESQIKDQGDGTLREDDEEREHVEKEELINERKAKGEQRIQKTKSGSEI
EDPKEPSLEMAKTDQDEERKRKQEAQKHRVRQEKTESKKKLLKESQENKDEEENPKGSVR
VRRTARRTTDAPCEAVPDDFPARRTRSRSNSVGSERSVSGVNTQESKGRGRGRGAQRSSD
TFQTTAVRSSRRRTTSAAAEQDSEDQVLSASFNSSSSKMSSTSSHNRGRARGRGRKTLAN
PNVVTPVIRESEQNSAALSRKPERSSTEFLQQDDKRKPDSHPSGTSRGQRRASDNRALVL
KDEGLQSNQENASADLTSPLPKRNMRGRGSKALKTQHVEEAEAPTVSDGDVARNKRQART
SETKRTQKSTEAGRKEEQKEEIPVGIQGRRTSRASSTQVKKNEESLPKREVEDWNKVVVG
AAEKRARSQTAVVQKNKNQGLEETQTSGSSMDQDGKEEASEQPQIPAMTPSRKRRVSSNS
SPVAKTPRSSSASPTTVSRLRAGSQAYKVLFTGVVDESGERVLARLGGAMAKGVSDMNCL
VTDKVRRTVKFLCAVAKGVPVVTTQWLEKSGKAGSFLSPYAFVVKDPEQEKKFSFSLQES
LRTASSQPLLQGYEIHVTKSVKPEPVHMKDIITCSGATFLPKMPTAHKPQTVVISCEEDL
RLCGPAMSASLLIVTAEFILTGILQQRVDFQTHALPPPVTNLQPAAGRERGRKKT
NT seq 5748 nt   +upstreamnt  +downstreamnt
atggatgccactcaggcgatcagggactcgatcttggagtcagaggaggaggaaaacgag
gaggagaaccaaaatgaaagagggaagccattggccaaactatgcatcttaagaaatcca
cacatccctgagaaagagttgcccctcttcctgggagataatatcctgggccgtgacccc
aacctctgcacactgcagctgttggcaccgtctgtgtccaagcagcatgctaccgtcagt
atctctgtttaccggagaagaggtcgtgacagtgaagtggacacggaggccctggtttgg
gacttagggagcatgaatgggacacgtaggggacgcctaaagctgacccctaatgtacgt
tatgccctcagcgagggtgatggtttgattttggggaacatcccatgtcggtatgtaagc
tccagggtggactccccttcatcccttggtgacgtggggacatccctgggcagacattcg
gaagtaaacaccagattgtcagactcctctgacagcaaacgggatgacgttgatacagaa
ggcaaggaatgtttaaaaagcaatacaaaggcaacgaggactcctgtcacaggtggttgc
ctctcatttgagcaaactccaatccagccaaaaaagaccttggtgccagaatctgactca
gactcagagagtgaaagagggggtagaggagacagaaagcagaagaccattgtatctgat
tcggactcccacaaatccagtcccagttctaatgcattcttaagcccccaaaataaagtg
gtacctgaaagtgaagacgaaagccccatcacaccatcttcctccaacagaaatgggtca
aacaggcacgtcagtttaagcatagaaaagacgaatgtcgacttaggacaacagcgtctg
aatcaaaacaactcacctgcatttgtggaaaacggtgaggagggggacgaaggagcagct
aatggagggacatattcagaagaaagtggaaagaatgtgaaaaggcaaattagtaagagt
cttaaaaaaggcagtgaatcacccacgtcgacatcaaaggtctaccgagatgccatccct
gaatttaacctggacagtgacactgatgtagagggaggagacgaagaggtggtgcctgct
gggcaaagtgatcaacccccaagcacaatcttgccacacatggacaatgacactgatgtc
gatgaaaatatctcagataaagctccaaaaactttgccttccactgatgaaacaacgaag
ccttctcatgttgctgctggttttcagcttgagggcatgataactgacagtgacactgat
gtggatgatgatgccactgtcacatcaaaagccatcttatttcagggtgtgcacactgct
gactcagcccccccagtacagtctggagattttcacttagacagcgacacagatttggat
gagaaagaagatggggggactggagcaaaacgggaaaatcccaaaatagatgaagcgctt
gataaatctgataaacctacacctactgcgcctcacaatctgcatccagacagtgacatc
tgtgatgaagtggtgagcgatccctacgtggctgaagctggaagagctgatttggatatt
ttgtccgacagtgacacagacttggaagaagattcacacccagctatccctgctgccaaa
aacctgtcagtgttttctgctgcagcatcaggagctctcaagccagattatgacgcagac
acagatgttgatgaacctcttgttccccaagctggagaagagggcaatccaggtgacctt
agaatgggaagtgatactgatgtggaggatgaggaggcaaatcttggagaggcaggggag
agccagatcccccacctgcggagagaaaacactcccaggtctctggttcctgttctacag
aactgttctactcctgttcagctttcagaaggagaggtcgaacagatggaaactcaggcc
ttcacaagccccacttcagatgctgaagattgtggcttctatgctgtggctgaaacccag
cccttcatccttcagaccagagattgttacaaaggcttgaacccaaaccaagcctctgta
cttgagtcgtccgctgtcgaacctgaggaccagtccatgagaggagattccttccagctg
gaagtgtctgacagcagccacctgcagggtgagctcagagctctgaccatggagaacacc
caagcttatgtctcagtagatgttggtgcaaacctggaggatactcaggcgtatacggag
aaaacgtctgcagagaatgattcaaacctggagtccacacagccctacggagaggacgag
gagcctgctagatgttcagaaatgtctataaaagaaggttgtgttgatttggcttttgaa
gcaactcaggcttatttctcagagttttatgatgaaggttcagatgaagtagagagacag
gattctgccaggactgaaagtgtggcttcggtgtgctcatctgcacttgctttggctgaa
acccagctaatgtcttcttctgtggagtctaataatccagtttgctccatagaacgtgtt
aaaaccagagttcagaatgaaacagaagagcatccagaaaaacacatcaccgaagctcaa
tcagtagctcaaacacaacccatgtatacagcgagtgacgaggagagcgatattgaaggg
ttatcagcagagtccctgcagcctgcaaaagtagagagacagccaatcactccttcagcc
ttgtcgctcgctgaaacccagcctgtgcatgtcagttctgatgaaactcagccgatggag
ttatgcgaagataatgaaaataacggtgaggactctgaggtgctgcgtccacgaaaaaga
aaagcaaagcagcttcatattgacaatgaagagtcgcagcagcacacaaactcttccaac
caatctgctgaaacccagcctatgaattcaagtgagggtgatgatgattctgattctatg
ccaagcctacggaaaaggaaagcaaagcccctgcagctggaagacgagacacagtcactc
gctggttctcaagtctctgctgctgaatctcagccttcagctactcatgaggaagagcaa
agcagcaaagacttcatctctgcagaaaaacgaaaagcaaatccgctggacattgaagac
gagcaaattatctctgaagctgctgctggtttaacgagtgaagatggggaaacccaaccg
atggctgcatgcaaagacgaaggtctgcccgaaagagaaacaaaagctcttcccctcccc
gctgctggagtttctgctgttgaagctgaggccgaagggagagacagaaaaaatgacaat
gaatcaatgacatgtgcacgaaaaagaaaatcaaagcggcttcatcttgaagaagaggag
acgcagccaatcacagtttctgaagtctctgcatctcggagaaagactgccgagacaaaa
gttttaccaagtgccaaagaaagaagagaacaaaccaagtctgagaatgacagcaatcag
gataaggcgaagcgggatcaatgcagaagagggagaagaaatacaaggaaacaggacaaa
catgatgaggaggacaaaaataggagcgctgaaaatgagagccagataaaggatcaagga
gatgggactctcagagaagacgatgaagaaagagaacatgtggagaaggaagagctgata
aatgaaagaaaagcaaaaggagaacagagaatacagaagaccaaatcaggaagtgagata
gaagatccaaaggaaccaagtttggaaatggcaaagacggaccaagatgaggaacgtaag
agaaagcaggaagcacagaaacacagagtaagacaggagaaaacagaatctaaaaaaaaa
ctgcttaaagaatcacaagaaaacaaggatgaagaggagaacccgaaaggttctgtcaga
gtccgacgaacagcaagaagaacaactgatgctccttgtgaagctgtacctgacgatttc
cctgcgaggagaacccgatcccgctccaactctgtcggctcagagaggtcagtctccggc
gtcaacacccaggagagcaaaggaagaggccgaggaagaggagcgcagaggagcagcgat
acctttcagaccactgctgtgaggagcagccgccgaaggacgacttcggctgcagcagag
caagacagtgaagatcaggtgctcagtgccagctttaactcatccagctctaagatgtcc
agcacaagctcccacaacagaggaagagcgcgaggaagagggaggaaaacgcttgctaac
cccaacgttgttactcctgttattagagaaagtgaacagaattcagcagctttgagccga
aagccagaaaggtcctccactgagtttctgcagcaagatgataaaaggaaaccagactct
catcctagtggtaccagtagggggcagcggcgagccagtgacaatagagctttagtttta
aaagatgagggccttcagtcaaatcaggaaaatgcatctgcagatctaacatcccctctg
cctaagagaaacatgaggggcagaggctcaaaagcattaaaaacccaacatgtggaggaa
gctgaagctcctacagtcagtgatggtgatgtcgccagaaacaagagacaagcaagaaca
agtgagacaaaaagaacccaaaaatcaacagaggcaggaagaaaagaggagcaaaaggaa
gaaattcctgttgggatccaggggaggagaacaagcagagcctcaagcactcaggtgaag
aagaatgaagagtctcttcctaaaagggaggtagaagactggaataaagtggtggtgggg
gctgctgagaagagagccaggagtcagacagcagtggtccagaaaaataaaaaccagggg
ctggaggaaactcagacatctggttcttccatggaccaggatggaaaagaggaagcatca
gagcagcctcagatcccggccatgactccttcccggaagcgacgggtctcttcaaattcc
tcccctgtggcaaagactccccgctcctcctctgcatctccaactacggttagccgacta
cgagctgggagccaagcctacaaggttctgttcacaggagtggtggatgaatctggagag
cgggtgttggctcgtttaggaggcgccatggccaaaggcgtctcagacatgaactgtctt
gtgacagataaagtgcgaaggacggtgaaattcctgtgcgccgtggccaaaggtgtccca
gtcgtcaccacgcaatggctggaaaagagcggtaaagctgggagcttcctctctccatat
gcgtttgttgtgaaagatcctgagcaagagaagaagttcagcttctccctgcaggagtcc
ttgaggactgccagcagccagcctctcctacagggatatgagatccatgtcacgaagtct
gtaaagccagaaccggttcacatgaaagacataattacctgcagtggtgctacatttcta
ccaaagatgcccacagctcacaagccccagaccgtagtgatttcctgcgaggaggacctg
cgactgtgtggccccgccatgtctgcgtctcttctcatcgtcactgctgagtttatactc
acaggaatcctgcagcagagagtcgattttcagacccatgcacttcctccccctgtaacc
aacctgcaacctgctgcgggcagggaaagaggcagaaagaagacttag

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