Girardinichthys multiradiatus (darkedged splitfin): 124865655
Help
Entry
124865655 CDS
T08099
Symbol
sox18
Name
(RefSeq) transcription factor SOX-7
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124865655 (sox18)
Transcription factors [BR:
gmu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124865655 (sox18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124865655
NCBI-ProteinID:
XP_047217314
LinkDB
All DBs
Position
1:complement(44571293..44577957)
Genome browser
AA seq
575 aa
AA seq
DB search
MNLIEPNLPRETSLHPSQMPFGGRWTSQTPSPASDPEMDFEESLSADCSSPDATGELRRA
EPRMALTASSRGQSPDLTQGGGVSVGSGDGKASGAEQRIRRPMNAFMVWAKDERKRLALQ
NPDLHNAVLSKMLGQSWKALSATDKRPFVEEAERLRVQHLQDHPNYKYRPRRKKTTKKLK
RVEPGLLLHSLAQGGAPGLCLGPGVGSLSAESVSGASAYGHPSSHTPHHHHPHQLLASLG
HFRDLPTPGHTELESYGLPTPEMSPLDVLEDTSGESVFFPQHLQDEAGMGGWSGYHRLHH
HNPHYSQHYNNHSHHNSVSVSASLNSGMNASLSPTRTSRLDTRISSVESNMTSSVSSVSS
KLTPTHAFSHQVPLRTPVKGPPPLADSSSPVSYPRPSFSLPEPVKCQATTMSTAPLGYLN
QMYANTTSSATHFTPSHLGQLSPPPETSSSSCSSSCILPASTFIRSAHSDHSSLEASGHM
GSSSAEFWSEVDRHEFDQYVNMGRNREEPYGLVGGCGGGSKVLAGCTNAVGGSSSNSIVS
SIMSGSGGCDDGSSPLISALSDASSAVYYSACITG
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaattgagcccaacttgcctagagagacttctctgcatcccagccaaatgcct
ttcggaggccggtggacgtcacaaaccccgagtcctgcttctgatcctgagatggatttt
gaagagagcctctcagcagactgcagctctcctgatgccactggagaactgagaagagcc
gaaccgaggatggctctgacagcgagctcgagaggacagagcccagatctgacccaggga
ggaggtgtgtcggttgggtcaggtgatggaaaagcttcaggggctgagcagaggatccgc
agacccatgaacgccttcatggtttgggctaaagatgagaggaagcggctggcccttcaa
aaccctgacctgcacaatgctgtgctcagcaagatgcttggtcagtcctggaaggccctg
agtgccacggacaagcgaccatttgtggaggaagctgaacgtctccgtgtccaacacctc
caggatcacccaaactataaatacagacctagacgcaaaaagaccactaaaaaactgaag
cgagttgaacctggactcttgctacacagcttagctcaaggtggggccccaggcctttgc
ttgggtcctggtgtcggctctttgtctgctgaaagtgtatctggtgcttctgcttatggg
cacccatccagccatactccccaccaccaccacccacaccagctgctggcatctctgggg
cacttcagggaccttccgaccccaggacacacagagctggagagctatggcctacccacc
ccagagatgtcgccactggatgtcctagaagacacatccggggaatccgtgtttttcccc
caacacttgcaagatgaagcagggatgggaggttggagtggttaccaccgccttcaccat
cacaacccacattacagtcagcactataacaaccacagtcaccataactccgtcagtgtt
agtgccagtttaaacagtgggatgaatgcaagtcttagtccaaccagaacttccagactt
gatactagaataagttctgttgaatcaaacatgacttcaagcgttagttctgttagctcg
aagttaactcctactcacgctttcagtcatcaagtccccttacggactcctgtgaaaggt
cccccacctctagctgattcctcatcccctgtatcctatcctcgtccttccttcagcctc
cctgagccagtcaagtgccaggcaacaactatgagcacagctcctcttggctaccttaac
caaatgtatgccaacactacctctagtgctacacatttcaccccctctcatctaggacag
ctttcccctcctcctgaaacttcttcctcttcctgttcatcctcctgcatcctccctgca
tccacttttattcgctctgcacactcagaccactccagtctggaggccagtggccatatg
gggtcttcctctgctgagttttggtctgaggtggacaggcatgaatttgaccagtatgtc
aatatgggacggaatcgagaggagccctatggactagttggaggctgtgggggtgggtca
aaggtcctggctgggtgtactaacgctgtcggaggcagtagcagtaacagcattgttagc
agtattatgagtggttctggtggttgtgatgatgggagcagccctctcatatctgctctc
tctgatgccagcagtgctgtttattacagtgcctgtataactggataa
DBGET
integrated database retrieval system
