Girardinichthys multiradiatus (darkedged splitfin): 124865666
Help
Entry
124865666 CDS
T08099
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gmu00535
]
124865666
Proteoglycans [BR:
gmu00535
]
Extracellular matrix (ECM) proteoglycans
Others
124865666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
VWA_2
Collagen
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_3
Motif
Other DBs
NCBI-GeneID:
124865666
NCBI-ProteinID:
XP_047216922
LinkDB
All DBs
Position
3:8163690..8352935
Genome browser
AA seq
1636 aa
AA seq
DB search
MLLMREVRWCLLAPLVLLAFVSCDSSKTQGQVSAPRRLRFKEHSSNTLLVSWREPKGDFD
SYLFLYNSLPGGQQKEIIVSKSDTKILITDYNPSKDYIISVIAVRGREHSRPLQGRFKAK
TAARGESVRRDESELQRVADPVGPPDDANEISGADQFVCHTEAIADILILVDGSWSIGRI
NFRLVRMFLENLVNAFDIGIDKTRIGLAQYSGDPRIEWYLNTYSTKDAVIDAVKNLPYKG
GNTLTGLALNFILDNCFKPESGSRVGVPKIGILITDGKSQDDVVPPAESLRKAGVELFAI
GVKNADENELQSIASEPHHTHVYNVADFNIMSSIVEGLTKIVCEQVEIQDKDIKQKFTPA
KMGMPLDLETSEITAQSFRVSWSPAPGNVEKYRVIYRPTQGGEPQEAIVAGGETSVLLQH
LSSLTEYQLAVFAVYTDEASEALRGSETTLALPPVTSLQLFEMTHSTMKARWSRVDGVSG
YTVLYAPLTDDGDLNNNECCPQINVGDGVTELELDGLMPDTEYTVTVYAMYGEESSDPII
NQETTLPLSPPRNLQFLDITHNSAHISWDPPPSGVKGYRIMWVMTDGLITKETKVGPVNS
YHLSELMSLMEYSVAIFALYNEGQSEPLTDGFTTTPVPGPLNLRSSEVSTDSFKVSWDHS
ATDIVLYRLSWAPFPGGDTNEIILSGSENRYTLSGLNPSTDYEVLLTAIFEDESESDMVS
VTETTLAITTMIPTTTTVTRKAVKNLYLSDETTQSLDASWELDDPTVESYRISYTDLSRD
QGEESISIGGGQKSTVLQPLLPDTRYKVTVTPVYGDGRDGISASAMGSTLPLLSPENLRV
SEESYNRFSVSWDPPQSPTEGYRIVYRPIYVQGPLLETTVGEDVNSILLLNLLSGTEYSV
QVMAFYPAGLSEPQLINAKTLFLGISGLSTYQVHPNSMCVQWQPLLHATLYRVSIQSTLN
GQRQELNLGGSASRHCFYDLTPSSQYQISVYTQMQEVEGPSVSITDMTLPEPTQAPTEAP
TTKPTPTIPPAKEVCKEAKADLAFLVDGSWSIGDDNFMKITRFLYSTMGSLDLIGPDGTQ
VAVAQFSDDARTEFLLSSHSNKEALLGAIQKIRYKGGNTKTGRAIKHVKESIFTTEAGAR
RGVPKVLVVLTDGRSQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNIASKPSDRHVFF
VDDVDAVKKIEEQLITFVCEAATATCPSVLMSGNTLAGFKMMEKFGLVEKEYSTIPGVSL
EPGSFNSYPCYRLHRNALVLQPTKYLHPEGLPSDYTISMMLRLLPETPQEPFALWEILNK
DNEPIVGLILDSSGKTLTFFNHDYAGDFQTVTFEGPEIKKVFHGSFHKLHVTISKTSVKV
VLDCSVVGEKSIRAAGNITTDGVEVLGKMVPSRASAPFQLQMFDIICSTSWASRDKCCEL
PALRVEEQCPPLPHACTCSQESKGPPGPSGPPGGPGVRGARGDRGEPGVTGPQGPTGEIG
PSGPPGPPGPQGPSGVSIQGPPGARGEKGERGDNGPAGPLGVPGSPGSPGRDGPPGTRGQ
PGNSGPQGRQGPPGPVGTPGAPGAPGPNGPAGPSGEQGVPGLAGTKGDKGERVRYSICRL
KPLLEQSSSENVPFLI
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgatgagagaggtcaggtggtgtttgctagctccattggttttacttgccttt
gtttcctgtgactccagtaagactcagggtcaagtttcagctccgaggaggctgcgtttc
aaagagcacagttccaacacactccttgtttcatggagggagcccaaaggagatttcgac
agctatttatttctctacaacagcttaccaggtggtcagcaaaaggagatcattgtgtct
aaatctgacacaaagattttaataacagactacaatccgtctaaggactacattattagt
gtcattgctgtgagaggcagagagcatagcagaccactacagggcagatttaaagctaaa
accgctgccagaggtgaaagtgtcagaagagatgaatctgagctccagagagtggctgat
ccagttggacctcctgacgatgccaatgagatctctggagctgatcagtttgtgtgccac
actgaggccattgcagatattttgatcctggtggatggctcatggagtataggccgaatc
aacttcaggctggtccgtatgtttttggaaaacctggtcaatgcatttgatattggcatt
gataagaccaggataggcctggcacagtacagcggtgatcccaggatagaatggtatctg
aatacttactctacgaaagatgccgtcattgatgcagtgaagaacctaccctataaagga
ggaaacactctcacagggcttgcattgaattttatcttggacaactgtttcaagcctgaa
tctggctcacgggttggtgtaccaaagattgggattctcatcacagatggaaaatcccag
gacgacgttgtacccccagcagagagccttcgaaaggctggtgttgagctgtttgctatt
ggtgtaaagaatgctgatgagaatgagctgcagtccatcgcctcagagccacatcacact
catgtctacaatgtggctgacttcaacattatgagctctatagtcgagggactgacaaag
atagtgtgtgaacaagtggagatccaagacaaagacataaagcagaaatttacaccagca
aaaatgggaatgccgctcgacctggaaacttcagagatcacagctcaaagctttcgggtc
tcatggagtcctgcgcctggaaacgtagagaagtacagagtgatttaccgtccaactcag
ggaggagaaccacaggaggctatcgtggctggcggtgagacttcagtgttgctacagcat
ctcagctctctcactgagtaccagctcgctgtgtttgctgtatatacggacgaggcaagt
gaagctctgagaggatcagagaccaccttggctctcccaccagtgaccagcctccaactg
tttgaaatgactcacagcaccatgaaagccagatggagccgcgtggatggcgtctcaggc
tacacagtgctctatgctcctcttacagatgatggagacttgaacaacaatgagtgttgt
ccccagattaatgtaggtgatggagtaacagagttggagctggatggcttgatgcctgac
actgaatacactgtcactgtttatgctatgtatggagaagagtccagtgaccctataata
aatcaggaaacaacattacctctgagtcctcccagaaatctccagtttttagacatcact
cataactccgcccacatcagctgggacccaccgcccagtggagttaaaggttaccgcatc
atgtgggtcatgacagatggactgatcacaaaggagacgaaggtgggtccagtgaattcc
taccacctcagcgagctgatgtctctgatggagtactcggtggccatctttgctctgtac
aacgaggggcaatcagagccgctcactgatggcttcacaaccactccagttcctggtcct
ctaaatctgcgctccagtgaggtcagcacagacagctttaaggtcagctgggatcactca
gccacagatattgttctctacagactctcctgggcaccattccctggcggtgacacaaac
gagatcattttgagcggaagtgaaaacagatacaccctcagcggcctcaatccctccact
gactatgaagtcctgttaacggcgatatttgaagatgaatctgagagtgacatggtctct
gtcacagaaaccactttggctataacaacaatgattcctaccacaaccacagtgacacgc
aaggctgtgaaaaacctttacctgagtgatgagaccacccaaagcttagatgcatcctgg
gagctggatgaccccactgtggagagctacaggatttcctacactgacctcagcagggat
caaggggaggaatctatatcaattggtgggggtcagaaaagcacagtgctccagccttta
ctgccagacacgcggtacaaagtgacagtcacgccagtgtacggtgatggacgagacggc
atcagcgcttctgccatgggttccacattgcctctcttgtctcctgaaaatctacgtgtg
tcagaggagtcatacaaccgctttagtgtctcctgggatccacctcagtctccgacagaa
ggttacaggattgtctaccggcccatctatgttcaaggtccacttttggagacaacagta
ggtgaagatgtaaactctattctcctcctcaatcttttgagcgggacagagtacagtgtc
caggtgatggctttctacccagcaggactgagtgaaccacagctcattaatgcgaagaca
ttgttccttggcatttctggcttatcaacctaccaggtgcaccctaacagcatgtgtgtt
cagtggcagcctcttctacatgccacgttgtaccgggtctccatacagtctacacttaat
ggtcagagacaagaactaaacctgggaggttcagcttcgcgccactgtttctatgacctc
actcccagtagtcaataccagatcagtgtttacacacaaatgcaggaagtggaaggaccg
tctgtatccattactgacatgacattgccagaacccactcaggctccaactgaagcaccc
accacaaagcccactcccaccatcccacctgctaaagaagtgtgtaaggaagccaaggct
gacctggcgtttttggttgatgggtcttggtccattggagatgacaacttcatgaagatc
acacgttttctctacagcactatgggatcattggatctgattggacctgatggcacccag
gtggccgtcgctcagttcagcgatgatgcacggacggagtttctgctgagttctcacagt
aacaaggaagctctgctgggagctattcagaagatcagatacaagggcgggaacaccaag
acaggtcgagccatcaaacatgtgaaggaatccatcttcaccactgaggcaggagccagg
agaggtgttccaaaggttctggttgttctgactgatggacgttcacaggatgacgtcaac
aaagtgtcgaaggagatgcaaatggagggctacatcattttcgcaatcggctttgcggat
gcagactatggagagctggtgaatattgccagtaaacccagtgacagacacgtttttttc
gtggatgatgtggatgctgtgaaaaaaatagaagagcagcttataacctttgtctgtgag
gctgccactgctacttgtccgtctgttctgatgagtggtaacacactggcaggtttcaaa
atgatggagaagtttggcctggtggagaaggagtacagcaccatacccggagtttctctg
gagcctggttcatttaacagctacccctgctacaggttacaccgcaatgccctggtgttg
cagcctaccaagtaccttcaccctgaaggtttgccatctgactacaccatttctatgatg
ctccgcttgctccctgagaccccgcaggaaccctttgctttgtgggaaatcctcaacaaa
gacaatgagccgattgtgggactaatcctcgacagctctgggaagacgctgaccttcttc
aaccatgactacgcaggagacttccagactgttacatttgaaggaccagaaatcaaaaag
gtcttccatggcagtttccataagctccatgtaaccatcagcaagacgtcagtgaaggtg
gtgttagactgttctgtggtgggggagaaatccatcagagccgctgggaatatcaccaca
gacggtgtcgaggtcctcgggaaaatggttccgtccagagcctctgctccgtttcagctg
cagatgtttgacatcatctgcagcacctcttgggccagcagagataagtgctgtgagctg
ccagctttgagagtggaagagcagtgtcctcccctgcctcatgcctgtacctgttcccag
gagagcaaaggacctccaggaccatctggaccccctggcggacccggtgtacggggagcc
agaggagaccggggggaaccaggagtgacgggaccacaggggcctactggcgaaattggc
ccatctggacctccaggacctcccggtcctcagggacccagtggagtctctattcaggga
cccccaggtgctcgtggggaaaagggagagagaggcgacaatggaccagcaggacctttg
ggggttcctggaagccctggctcacctggcagagatggtcctccaggaacgaggggccag
ccgggtaacagtggacctcagggaagacaaggacctcctggacctgttggaactccgggc
gctcctggagctccaggaccaaatggaccagcagggccttcaggtgaacaaggagttcct
ggtcttgctggtaccaaaggcgataaaggggaaagagtaagatactccatttgtagactt
aagccgctgttagagcaatcttctagtgaaaatgttccttttctgatctaa
DBGET
integrated database retrieval system
