Girardinichthys multiradiatus (darkedged splitfin): 124865686
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Entry
124865686 CDS
T08099
Symbol
gsdmeb
Name
(RefSeq) gasdermin Eb
KO
K22146
gasdermin-E
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
124865686 (gsdmeb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmu02000
]
124865686 (gsdmeb)
Transporters [BR:
gmu02000
]
Other transporters
Pores ion channels [TC:
1
]
124865686 (gsdmeb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
124865686
NCBI-ProteinID:
XP_047216961
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All DBs
Position
3:complement(3940190..3944983)
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AA seq
463 aa
AA seq
DB search
MFAVATKNFVEEVDDGGLLIPVCSLNDTVGLLTVVVKRKRFWFWQKPKYLPTDFSLNDLL
TGDSPVTPVVLETDFIKYSSTFGDNVQGNVDAKFVKANLSLESKDSSKLQSSFGSLKKEE
VEVQKLLRDSKDRVLDMSHSLIQQNREKQKQVFGIVKERIITTQPCSVIEEVQQGGQCGG
SLTSCGPKASKVALKENGSLSIDSNITMEIPTHTTLAYSLIELEIKQDGHFELCVMSGTR
GGFEVDGHVEKRLLGVQTSENLPLQQELERLKHHFQLLSALPASTRSSLLQHVTELMQDP
AAISALQNALDRMLGKKPSLDDDDELMESQQQNIRAVFNLLEQSGAEESTQTSLLTALHL
TVSALDEMSYDCLPVLKLCGNPATLQTLELLVQCASGNRQTTVSSAALPGDVYARTEHLF
ASSGVSLRRDGDVVRAEITNEPGNQPLILFIAIKSLASLAHGC
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccgtagcaaccaaaaactttgtggaggaggtggatgatggaggcttactgatc
ccagtgtgcagcctgaacgacaccgtcggtcttctgacggtggtggtgaagcggaaacgc
ttctggttctggcagaaacccaaatatcttccaaccgactttagcctgaacgacctgctg
acaggtgactcacctgtaacgccagttgtgttggagacggacttcatcaaatacagcagc
acgtttggtgacaacgtgcaggggaacgtggatgccaagtttgtcaaagccaacctgagc
ctggagagtaaagactcctccaaactccagtcgtcctttggcagtttgaagaaagaggaa
gttgaagttcagaagttgctgcgagactccaaagacagagttctggacatgtcccactct
ctgatccagcagaacagagagaaacagaaacaggtgtttggcatcgtgaaggagcgcatc
atcaccacacagccctgttcagtcatagaggaggtgcagcaggggggacagtgcggaggg
agtctgacctcctgcggccccaaagcatctaaagttgcactgaaggaaaatggaagtttg
agcatcgacagcaacattacaatggagatccctacacacaccactctagcctacagcctt
atagagctggagatcaagcaggatgggcactttgagctgtgtgtgatgtcaggcaccaga
ggaggttttgaagtagacggccatgttgagaagcggctgctgggtgtgcagacctcagag
aaccttccgcttcaacaggaactggagagactgaagcatcatttccagctgctttctgct
ctcccagcttccaccaggtcgtctctgctccaacacgtcacagaactgatgcaggacccg
gcagccatcagtgcacttcagaacgcgctggaccggatgctgggtaagaaacccagcctg
gatgatgatgatgaattaatggagtctcagcagcagaacatccgagcagtttttaacctg
ctggagcaatctggtgcagaggagtcgactcagacgtcactcctcaccgcattgcatctg
accgtcagtgcattagatgagatgtcatatgattgtcttcctgttttaaaactatgtggt
aatcctgccaccctacagacattggagctactggtgcagtgtgcatcaggaaacaggcag
acgactgtgagcagcgcagcactgccaggtgacgtctatgcgaggactgaacatctgttt
gcctcctctggtgtatctctaaggagagacggtgatgtggtgcgggctgaaatcacgaat
gaacctggaaatcaacctctgatcttgtttatcgctattaaaagtctcgcctctttagcc
cacggttgttga
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