Girardinichthys multiradiatus (darkedged splitfin): 124865885
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Entry
124865885 CDS
T08099
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124865885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124865885
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124865885
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124865885
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
DUF5711
RING_XB3-XBAT31
Prok-RING_4
PQQ_2
WD40_WDHD1_1st
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
124865885
NCBI-ProteinID:
XP_047217332
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All DBs
Position
3:3809685..3811947
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AA seq
399 aa
AA seq
DB search
MDQSPGVPHHGCLSPEATLREIQINLLECKVCFETFNTQQRERRPQNLSCGHVLCLECIT
GLSHALLRKLECPFCRQLCSVDTISHCQVLSDLQELLLSPKPSSSAPPHRAKGGFILETS
LHLRATFGGWGTLINPTRIAVLGSAGGVVVVHDGEKRVVVFNQQGRKLHSFGERGTGNGD
ICYPVDVAVSPTGHVIVTDAGDKAVKVFTSRGLHKVTIKDCFQLPWGVDTDSGGQILVSD
IQVGTLFRIKVDLNHGVILEIQTVIANLQCPKAVAHCRKTGNTAVMEHPREKHQNRKLKV
FTKDFHLLYQMDSFILTLQSSFRLNISNVAFSSDGDVVVSDSDQGLICSLGNLQNNLVLT
PLVGDHLIRPAGLVLLDSSIITVDGGDHTVKIYSTKPDA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaccagagtcctggtgtcccacatcatggctgcctgagtcctgaggcaaccctgaga
gagatccagatcaacttactggagtgtaaagtctgctttgagacgtttaacacgcagcag
agggagcgcagaccgcagaacctttcctgtggtcatgttctctgtctggaatgcatcaca
ggtttgtcccacgctctcctgaggaagctggagtgcccgttctgtcgacagctgtgcagt
gttgacaccatctcccattgccaggttctcagcgacctgcaagagctccttttatccccg
aaaccgtcctcctctgctccccctcacagggctaaaggaggatttatcttggaaacatct
ctgcatcttcgtgccacatttgggggctgggggactctcatcaaccccactagaattgct
gttttgggatctgctgggggagtagtcgtggtgcatgatggagagaagagagtggtggtg
ttcaaccaacaagggaggaagctgcacagttttggagagagaggaacgggcaatggggac
atctgttacccagtggatgtggcagtgagtcctactggtcatgtcatagtgacagatgca
ggggacaaagccgtgaaggttttcacttccagagggttacacaaagtgacaatcaaagat
tgcttccaacttccttggggcgtggacacagacagtggtgggcaaatcctggtttcagac
atccaggttggcacactgttcagaataaaagtggaccttaatcatggcgttatcctggaa
attcaaacagtcatagccaaccttcagtgtcccaaagctgtggctcactgtcgaaaaacc
ggaaacacggcagtgatggagcatccaagagaaaagcaccaaaacagaaagctgaaagtg
tttacgaaagacttccaccttctttatcagatggacagtttcatcctgaccctgcagtcc
tccttcaggttgaacatatcaaatgtggcattcagcagcgatggagatgtggttgtgtct
gactctgaccaggggttgatttgtagtttaggaaaccttcagaataatctagtcctgact
cctcttgtgggagaccatctcatccgacctgctgggttggtgttactggacagctctatc
attactgtggatggaggcgatcatacggtgaagatttattctactaagcctgatgcttga
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