Girardinichthys multiradiatus (darkedged splitfin): 124865906
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Entry
124865906 CDS
T08099
Symbol
thbs3a
Name
(RefSeq) thrombospondin-3a
KO
K04659
thrombospondin 2/3/4/5
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04145
Phagosome
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
gmu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124865906 (thbs3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124865906 (thbs3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
124865906 (thbs3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124865906 (thbs3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124865906 (thbs3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmu04147
]
124865906 (thbs3a)
00536 Glycosaminoglycan binding proteins [BR:
gmu00536
]
124865906 (thbs3a)
Membrane trafficking [BR:
gmu04131
]
Endocytosis
Phagocytosis
Opsonins
124865906 (thbs3a)
Exosome [BR:
gmu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124865906 (thbs3a)
Exosomal proteins of colorectal cancer cells
124865906 (thbs3a)
Exosomal proteins of bladder cancer cells
124865906 (thbs3a)
Glycosaminoglycan binding proteins [BR:
gmu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124865906 (thbs3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_MSP1_1
EGF
Motif
Other DBs
NCBI-GeneID:
124865906
NCBI-ProteinID:
XP_047217372
LinkDB
All DBs
Position
3:complement(47233975..47271185)
Genome browser
AA seq
951 aa
AA seq
DB search
MGWSFPVLLTVLCGQLSAGVPDGADIQVIDVLSLQDSKQSVAAVEKLSGSLSALSDIYVV
STFRLPVKMGGVLFGLYSKQDNRKYLEVAVMGKISKVLVRYIKADGKVHTVNLQNSNLAD
GRTHSIIVRLGGLQRSNMHVELYADCRLADSSQGVPSLVPLPREAEMVEIRHGQKSYARL
QGAVESLRLALGGSVAKAGALTDCPFQGDSSAYNSVSGDVQSILGEHTKALIGQLIIFNQ
VLGELRQDIREQVKEMSLIRNTILECQVCGFHEPRSRCSPNPCYKGVSCMDSLQYPGYTC
GPCPPGTTGNGTHCKDIDECELQPCYSPGACVNTMGGFSCKPCPPGLWGAPLAGTGLDYA
KTHKQQCVDIDECVDLTDACASNSVCINTVGSYKCGGCKPGFFGNQTSGCFPRNSCAALT
FNPCDTNAHCTMERNGEVSCRCNVGWAGNGHTCGMDTDIDGYPDRSLPCMDNDKHCKQDN
CVFTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVPNKDQQNSDSDSFGDSCDNC
PTVPNSDQKDTDNNGQGDACDQDIDGDGIPNVLDNCPKVPNPMQTDRDRDGVGDACDSCP
ELSNPMQTDVDNDLVGDVCDTNQDTDGDGHQDTRDNCPDIPNSSQLDSDNDGLGDDCDHD
DDNDGVNDDYDNCRLIINPNQKDSDANGVGDVCENDFDNDAVMDLIDVCPESAEVTLTDF
RAFQTVILDPEGEAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTV
TDDDYAGFIFGYQDSSSFYVVMWKQTEQAYWQSVPFRATAQPALQLKAVKSRTGPGEFLR
NALWHTGDTPGEVKLLWKDPRNTGWKDKTSYRWQLSHRPQVGYIRVKLFEGRDMVADSGV
VIDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTVSEDFAAHRQQVLMHIQV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgggttggagtttcccggttctgctgacagttctgtgcggtcagctgtcggctggagtc
ccggacggggcggacattcaagtgatcgacgtgctgagtctgcaggactccaagcagagc
gtcgcagcggtggagaaattgtccggaagtctgagcgcgctcagtgacatctacgtggtg
tcaacgttccgactgccggtcaagatgggcggggttctgttcggactctacagcaagcag
gacaacaggaagtacctggaggtcgctgtcatgggaaagatcagcaaagtcctggtccgg
tacatcaaagctgacgggaaggtccacactgtgaacctgcagaactccaacctggctgac
gggcggactcactccatcatcgtgagacttggtggccttcagcgcagcaacatgcacgtg
gaactgtacgccgactgccgattggcagactccagccaaggcgtgccttcattggttcct
ctgcccagagaggcagagatggtggagattcgacacggacagaaatcgtacgcccgactt
cagggcgcagtagagtccctccgcctggctctagggggcagcgttgctaaagcaggagct
ctgactgactgtccgttccaaggagactcgtcagcctacaactcagtgagcggagatgtc
cagtccatcctgggtgaacacaccaaggctctgattggtcagctcatcatcttcaaccag
gtcctgggagagctgcggcaggacatcagagagcaggtaaaggagatgtctctgatcagg
aacaccatcctggagtgtcaggtttgtggtttccatgaaccacggtctcgctgctctcca
aatccatgctataaaggagtctcctgcatggacagcctgcagtaccctggatacacttgt
ggaccgtgtccacctggaaccacgggcaacgggacacactgcaaggacatcgatgagtgt
gagctgcagccttgttattctcctggagcctgcgtgaataccatggggggtttcagctgc
aagccgtgtcctccaggcctgtggggggcgccactggctggaactggactggactacgct
aagacacacaaacagcaatgtgtggacattgatgagtgtgtggatcttacggacgcctgt
gcatcaaactctgtctgcatcaacactgtgggttcttacaaatgcggaggctgtaaacct
ggtttctttggcaaccaaacatcaggctgcttccccaggaactcatgtgctgcgttgacc
tttaacccttgtgacaccaacgcccactgcaccatggagaggaatggagaggtttcctgc
aggtgtaacgtgggctgggccgggaatggacacacgtgtgggatggacacggacattgac
ggttatcccgaccgctctctgccctgcatggacaacgacaaacactgcaaacaggacaac
tgtgtgttcaccccaaactcgggtcaggaggatgcggacaacgacgggatcggagaccag
tgcgacgaggacgcagacggagatggcatcaagaacgtggaggacaactgccgtttggtc
ccaaacaaagaccagcagaactcggacagcgactcttttggagactcgtgtgataactgt
cccaccgtccccaacagtgaccagaaggacacggacaacaacggacagggagatgcctgc
gaccaggacatagatggagatggtattcccaacgttctggataactgtcccaaggttccc
aacccaatgcagacggatagagacagagacggagtcggagacgcctgtgacagttgtcct
gagctcagcaaccctatgcagacggacgtggacaatgacctggtgggagacgtctgtgac
accaaccaggacacggacggagatggtcaccaggacaccagagacaactgtcctgacatt
cccaacagttcccagctggactccgacaacgacggcctcggagacgactgcgaccacgac
gacgacaacgacggtgtcaacgacgactacgacaactgcagactgatcatcaacccgaac
cagaaagactcagatgctaatggagtcggagatgtctgtgagaacgacttcgacaacgat
gccgtgatggatctaattgacgtgtgtccagagagcgccgaggtcactctgacggacttc
cgagcctttcagacggtgatcctggatcctgaaggcgaggctcagatcgaccccaactgg
gtggttctgaatcaggggatggagattgtgcagacgatgaacagtgatcctggtttagct
gttggctacacagcgtttaatggggtcgacttcgaaggaacgttccacgtcaacacagtg
acagacgacgactacgccggcttcatctttggataccaggattcctccagcttctacgtg
gtgatgtggaagcagacggagcaggcgtactggcagtccgtccccttcagagccacggcc
cagcccgccctgcagctcaaggcagtgaagtcccgaaccggaccgggtgagtttctgagg
aatgctctgtggcacactggagacacacctggagaggtgaagctgctctggaaggacccc
cgaaacaccggctggaaggacaaaacctcgtaccgctggcagctgagccaccggccgcag
gtggggtacatcagggtgaagctgtttgaggggagggacatggtggcggactccggtgtc
gtcatcgacacgacgatgagaggaggccgacttggagttttctgcttctcgcaggaaaac
atcatctggtccaacctgcgctacagatgtaacgacacggtgtctgaagactttgcagct
catcgtcaacaggttctcatgcacattcaggtctga
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