Girardinichthys multiradiatus (darkedged splitfin): 124866185
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Entry
124866185 CDS
T08099
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmu03016
]
124866185 (cdkal1)
Enzymes [BR:
gmu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
124866185 (cdkal1)
Transfer RNA biogenesis [BR:
gmu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
124866185 (cdkal1)
Prokaryotic type
Methylthiotransferases
124866185 (cdkal1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
Motif
Other DBs
NCBI-GeneID:
124866185
NCBI-ProteinID:
XP_047217826
LinkDB
All DBs
Position
3:9221107..9502609
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AA seq
561 aa
AA seq
DB search
MPSASDSLIEDIEDMVSFNDPTPQDRQSARKNIMPRSRKKKELLSTEELQADSLIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKMTDDPAEADVWLLNSCTVKNPAEDHFRNSIKK
AQDQQKKVVVAGCVPQAQPRMDYLKDLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVQEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFRKVVDFLKDRVPGVTIATDIICG
FPGETEEDFQDTLELVKHYHFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKQLSELFH
SYNPYDHKVGERQFVLVTEESFDAQYYVSHNKFYEQVLVPKRAEFKGKMIEVDVYEAGKH
FMKGQPVENSKPFTPSISMPLRKGEVSGLMQELVVNGVKGAASVRPDSALQVGSYSELLK
KLGIGIALAAAILAFIVEKLY
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgccagtgactctctgattgaagacattgaagacatggtgtctttcaatgac
cccactcctcaagacagacagtctgcaagaaagaatattatgccaaggtcaagaaagaag
aaagagcttctgagcactgaggagctccaagcagacagtttgatccctggcacccaaaag
atctggatgaagacatggggctgcagtcataataactcggatggagagtacatggctgga
cagcttgcagccagcggatacaagatgactgatgatccagcagaagcagacgtgtggttg
ctcaacagctgcacagtgaaaaaccctgcagaggaccacttcagaaactcaatcaaaaaa
gcccaggaccagcagaaaaaggtggttgttgctggatgtgttccccaggctcaaccacgg
atggactacctcaaagatctcagcattattggggtccaacagattgatcgggtggtggaa
gtagtggacgaagccgttaaaggtcactctgtccgcctgctgggtcagaagaaagatgga
ggaaggagactcggaggtgcgagactggatctgccaaagatcagaaaaaacccgctgatt
gaaatcatctccattaacacggggtgtctgaatgcatgtacctactgcaagacgaaacat
gctcgtggagacttggccagctatcccatagaggaacttgtggaaagagccaggcagtct
ttccaggagggagtgtgtgagatctggttgacaagtgaagacacaggtgcttatggcaga
gacatagggacagacctgcctactttactgtggaggttggtgcaggagattcctgaagga
gccatgctgaggctgggtatgaccaacccaccttatatcctggaacatctggaggagatg
gcaaagattttgaatcatccacgtgtttatgccttccttcatgttcccgtgcagtcggcc
tcagacagtgtcctgatggacatgaagagagaatactgcattgatgatttcagaaaagtt
gtggacttcctcaaagacagagtacctggggtaacaattgctacagatataatctgcggg
tttcctggtgagactgaggaggacttccaggacaccttagagcttgtgaagcactatcat
tttcccagtctgttcatcaaccagttctaccccagacccggtacacctgctgctaagatg
gagcaagtcccagcacacgtgaagaagcaaaggactaaacaactctctgaactcttccat
tcttacaacccctacgaccacaaggtaggagaaagacaatttgtgttggtgacagaggag
tcctttgatgcgcaatactatgtttcccacaacaagttttacgaacaggtgctggtacct
aaaagagctgaattcaaagggaagatgattgaagtagacgtctacgaggcaggaaaacac
tttatgaaaggacaaccagtagaaaacagtaagccattcactccctccatttccatgcct
cttaggaaaggagaagtgtctgggctaatgcaggaacttgtggtcaatggagtcaaagga
gctgcttctgtgcgacctgactctgcgctccaggttggctcctacagtgaactgctgaag
aaactggggataggcattgcactagcagccgccatcttagcctttattgtagagaagctg
tattga
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