KEGG   Girardinichthys multiradiatus (darkedged splitfin): 124866234
Entry
124866234         CDS       T08099                                 
Symbol
atg12
Name
(RefSeq) ubiquitin-like protein ATG12 isoform X1
  KO
K08336  ubiquitin-like protein ATG12
Organism
gmu  Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04068  FoxO signaling pathway
gmu04136  Autophagy - other
gmu04140  Autophagy - animal
gmu04621  NOD-like receptor signaling pathway
gmu04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:gmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    124866234 (atg12)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    124866234 (atg12)
   04136 Autophagy - other
    124866234 (atg12)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    124866234 (atg12)
   04622 RIG-I-like receptor signaling pathway
    124866234 (atg12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmu04131]
    124866234 (atg12)
   04121 Ubiquitin system [BR:gmu04121]
    124866234 (atg12)
   03029 Mitochondrial biogenesis [BR:gmu03029]
    124866234 (atg12)
Membrane trafficking [BR:gmu04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    124866234 (atg12)
Ubiquitin system [BR:gmu04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   124866234 (atg12)
Mitochondrial biogenesis [BR:gmu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    124866234 (atg12)
SSDB
Motif
Pfam: APG12 ATG8 XendoU
Other DBs
NCBI-GeneID: 124866234
NCBI-ProteinID: XP_047217883
LinkDB
Position
3:complement(30381127..30389101)
AA seq 117 aa
MSDNAESPTETQKEELQSPSENSATSEEKKKIDVLLKAVGDTPIMKTKKWAVDRGRTVQS
LAQFISRFLKLDANEQLFIYVHQSFAPSPDQEVGVLFDCFASDGKLVLHYCKSQAWG
NT seq 354 nt   +upstreamnt  +downstreamnt
atgtctgacaatgctgagtctccaacagaaacacagaaagaggagctacagtcaccgtca
gaaaactccgcgactagcgaggagaaaaagaaaattgatgtgctgctgaaggctgtggga
gacactcctataatgaaaacaaagaaatgggctgtggacagggggaggacggtgcagtcc
ctggctcagttcatctctcgcttcctcaaactcgatgctaatgaacaactgttcatctat
gttcatcagtcatttgcaccatcaccagatcaagaagtgggggtcctctttgattgtttc
gccagcgatgggaagcttgttctgcattattgtaaatctcaagcctggggttag

DBGET integrated database retrieval system