Girardinichthys multiradiatus (darkedged splitfin): 124866314
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Entry
124866314 CDS
T08099
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124866314 (prdm1a)
Transcription factors [BR:
gmu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
124866314 (prdm1a)
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GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
Phage_zn_bind_3
Motif
Other DBs
NCBI-GeneID:
124866314
NCBI-ProteinID:
XP_047218002
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Position
3:43040879..43055562
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AA seq
846 aa
AA seq
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MCGWDQSYTATSHSSAMLTSEGARTMEQDDTNHKMASTATSMGPDGAETMTDTDVDMEME
IEEADMTQWTEAEFEEKCTYIVKDTACEAGPDGDVAMTMTRAEASLPRNLVSKQRADTKE
VVGVCSREYIPKGTRFGPLVGEIYTADSVPKDANRKYFWRIFVDGEFHHFVDGLDEARSN
WMRYVNPAKLAAEQNLAACQNGMEIYFYTVKPIPAGAELLVWYCHDFARRLRYPPSGEVM
MQKLKQSFMEVKQQQVDREESPVEASSPFPVSITPSPPKREHSVLSILRGTNSTSSSLAP
KREPSRPLPTRPRCADSPERLLYPRAIYPALRPHFPLSEDILKPNQLGYPLTHSPGKQSS
VTPSPPARSSPGTSPHSSPSGPALSPVSFYPYPGYSPPSAPLSSTFYTPGPQYSRYLLPH
HYPLPGGGVPTVGGIFPRIYPVYGSLLPHHLPLLPSDTAGRRLVIPEPVHPSSISAHRDY
FLPGPRSAFSTATSLRDKAAAHSSYPGHPNPHGSAHTPSSSSPTAGTAPPSEQLPTKPTS
AHLGNTSEHHPDEEAINLTKVKRGAGSAGYKALPYPLKKQNGKIKYECNVCSKTFGQLSN
LKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTH
LRLHSGEKPYHCKLCPAKFTQFVHLKLHKRLHSRERPHKCPHCHHHYIHLVSLRLHLKGY
CLAASSGSGSPNVSSQAALEEVHRANEEIERFDVSEHAERLEQLQGGVEIDAMLEKQVLG
MLWRETDLKSPNFLPSYNGTATELLSAGYGAFESSNETSVIKMRRSTPIPPLAASITVKQ
ESEDRT
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgggaccaaagttacacggcgacctctcatagctcggccatgttgaccagt
gagggggcacgcactatggagcaggatgacacaaaccacaagatggcctccacagctacc
agcatgggtccggacggagcagagacgatgaccgacactgacgtggacatggagatggag
atagaggaggccgacatgacacagtggacagaggcagagtttgaggagaagtgcacatac
attgtcaaagacacagcatgtgaggcggggccagacggtgatgtagcaatgacgatgaca
agagctgaggcatcgctgcccagaaacctggtctccaaacaacgtgcagacaccaaggag
gtggtcggagtgtgcagcagggagtatatccccaaaggaacccgcttcggtcccctggtg
ggcgagatctacacagccgacagtgtccccaaagacgccaaccggaagtacttctggagg
atcttcgtggatggtgagtttcaccactttgtggacggtctggatgaggcccgctccaac
tggatgcggtacgtgaacccggccaaattggcagcagagcagaacctggcggcatgccag
aatggcatggagatttatttctacactgtgaagcccatcccagccggcgctgagctgctc
gtctggtactgtcatgacttcgcccgccgcctgagatacccaccatcaggggaagtgatg
atgcaaaaactcaagcagtcatttatggaagttaaacagcagcaggtggacagagaggaa
agcccagttgaagcatccagtccgtttcctgtctcaattactcccagtccgcccaagagg
gagcatagcgtcctgtccattctccgtggcactaacagcacctcatcatccttggccccc
aagagggagcccagccgccctcttcccacccgcccacgttgtgctgatagcccggagcgg
cttctgtacccccgtgccatctacccggctctcaggccccattttcccctctctgaagac
attctcaaacccaaccagcttggttaccctttaactcattctcctggcaaacagtcatca
gtcacaccaagcccacctgcaagaagcagcccaggcaccagccctcatagtagcccttct
ggtccagcattatcaccggtttctttttacccttaccctggttactcccctccatctgcc
ccactgtcttcaacattctacactcctgggccacagtactcgcgttacctcctaccccat
cattatcctctacctggtggtggtgtcccaaccgtgggagggatatttcctagaatctat
ccagtctacggcagcctattgccccatcatttgcccctcctgccttctgacactgcaggg
aggcgtcttgtaatacctgaacctgtgcacccctcctcaatctctgctcacagagactat
ttcctgcccgggccaagaagtgccttctcaactgctacttctttgagagacaaagcagca
gctcacagctcttatcctgggcaccctaacccacatggatcagctcacactccctccagc
agctccccaactgccggcacagcacctcccagtgagcagttgccaaccaagcctacctca
gcccatctgggaaacactagtgaacatcacccagatgaagaggctattaatctgaccaaa
gtgaagcgtggcgcagggtcagcgggctacaaggcattgccttaccctctgaaaaagcaa
aatggaaaaattaagtacgagtgcaacgtgtgcagtaagaccttcgggcagctgtcaaac
ctaaaggttcatcttcgagtgcacagtggagaaagaccgttcaaatgtcaaacctgtaac
aaaggcttcactcaacttgctcatctgcaaaaacactacctggttcacactggggagaaa
ccacatgaatgtcaggtttgccacaagcgattcagcagcaccagcaacctgaaaactcac
ctgcgccttcactcaggggagaagccctatcactgcaagctctgtccagctaaattcacc
cagtttgtccacctcaagctgcacaagcgcttacactcccgtgaacgtccacataagtgc
ccccactgccaccaccactacatccacctggttagcctgcgactacacctgaagggttac
tgcctggctgcaagctccggttctggcagtccgaatgtttcgagtcaagctgccttggag
gaggtgcatcgcgccaatgaagagatcgagcgcttcgacgtcagtgagcacgctgagcga
ctggagcagctgcagggaggagtggagatagatgccatgttggagaaacaggtcttgggg
atgctgtggagagagaccgacctcaagtcccccaactttcttcccagttacaatggcact
gctacagagcttctgtctgcaggttacggtgcattcgagtcctcgaacgagacgtcggtt
atcaagatgcgccgcagcacccccatcccaccacttgctgctagcattactgtcaagcag
gagtcagaggatcgtacataa
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