Girardinichthys multiradiatus (darkedged splitfin): 124866595
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Entry
124866595 CDS
T08099
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gmu00535
]
124866595
00536 Glycosaminoglycan binding proteins [BR:
gmu00536
]
124866595
04091 Lectins [BR:
gmu04091
]
124866595
Proteoglycans [BR:
gmu00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
124866595
Glycosaminoglycan binding proteins [BR:
gmu00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
124866595
Lectins [BR:
gmu04091
]
C-Type lectins
Lecticans
124866595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
hEGF
EGF_3
I-set
CsgH
Motif
Other DBs
NCBI-GeneID:
124866595
NCBI-ProteinID:
XP_047218410
LinkDB
All DBs
Position
4:complement(51874315..51903746)
Genome browser
AA seq
1480 aa
AA seq
DB search
MLKGTVLLSLCLSIASATFDYLFEQSSFMDPEDVLSVSIPLEGLQRPLLGETLLLPCYFE
DHTFEDPGAPPIDPLSHRIKWSHVTKEKVTTILVALKGQVHIGEDYLDRVYLQSYPQTPT
DASIKISELHSSDTGVYRCEVQHGIEDSHDTVHVHVQGIVFHYRALMGRYTLTFEKAKAA
CAQNSAVIASPEQLQAAFDDGFHQCDAGWLSDQTVRYPIHEPRMNCYGDKEELPGVRTYG
VRNLNETYDVYCFADRMTGRVFHTVSARKLTFYEAALACVNQGAQLATTGQLYLAWQGGM
DVCNAGWLGDGSVRYPINVQRPQCGGGLLGMRTVYRYINQTGYPLPDSRYDAFCYTDSPD
DEGSGTDEGSGVLIVTTVTKSPEVFFSRTTTESEAVGELETQQPFNLNYTYSESLNKQAL
PQPTNITQISFDLIEAITNQPAVHMETRKTSFISPAGVVFHYRSPTGRYAFTFVEAQLAC
QGVGGSMATPQQLQQAYEAGYHQCDAGWLLDQTVRYPIVFPREKCAGDFGEKPGVRTYGL
RPADERYDVYCYTEGIKGEVFHVGSAEGFTYDEALSACENHSAVLASTGELYAAWKMGLD
KCRAGWLLDRSVRYPLNSPRPGCGEEKSGVYTLYSNPNQTHYPETDARFDAYCLRADFLP
EANETGLNTTGILKALWNLTSVTDLLRPDASFIVPPIPVEKSGSGSGSANFDSGSEGDPS
AEQSSSGDQGISGDLSGSGDQVTSGEPSGSGDQIISGELSGSGDQITSGEPSGSGYQIIS
GDLSGSGDQDGFGKTVLSNGGSGLGSAAGSGSGLSEVGSGITVVFSGADSVVSGEGFTLG
ELQEAGEGSTGIFIFPLLSGAGSRVLSKSGDRSGSGSRFDSIDKDSSEYRSVQTGRLTDM
TSGFILGQEFSGFNGFPSGSSSGSGSEQSRAFSGSADAQILLIDDKLIDATIAKKEYKLS
GGPLDFSGSGDLSGSGTLSSDHSGSSSGSGSEFFTGLTFMGSGFTELIVSTSGEHEEASG
GVFYSFEQGSGVQISGFGISSFTSGSFVSGSGFSGSETPTARDEGYVTFLTEGLMTEITG
QDKMPLELGEGSVEHSGVTRGDTGSYSGDGDKDSFKDNSLMLGVSSGDSSDPSVVMLLTP
LVDPAVTEPTTGTEENIHGAELIEKSRVYMTPGPTIVPAGLAAPPAEARPAFPQMTHIIE
AFNPCEPNPCGNASCTVEEGVALCFEAEVCHPNPCANGATCVESADSFKCLCLPSYGGER
CETEEQLCEDGWTKFQGNCYLHISDREEWLEAEKRCRDLNSHLVSIITPEEQQFVSASVQ
DYQWIGLNDKTVENDFQWTDGTPLQYENWKLNQPDNYFNPGEDCVVMIWHDSGKWNDVPC
NYHLPFTCKKGPVSCGAPPVVKNAHMFGNRRPKYPVNSIIRYQCNSGFRQRHLPVVRCQA
DGQWEKSKVECTDVKPRSEYTAGPAGIHQREAKTNKLNLV
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaagggaccgtgctcctgtctctgtgtctaagcatcgcctctgcaacatttgat
tatcttttcgaacagagctcctttatggatccagaggatgtcctcagtgtgagcattcct
ctggagggtctacagcgtcctctgctgggagaaactctgttactaccatgctactttgag
gatcacacttttgaagaccccggtgccccccccatcgaccccctttcccatcgcattaaa
tggagccacgtcacaaaagaaaaggtcaccaccatcctcgtggctttgaagggacaagtg
cacatcggagaagattatctggacagagtttatctgcagagctacccccaaaccccaaca
gatgccagcatcaagatatctgagctgcattccagtgacacaggagtgtatcgctgtgaa
gttcagcatggcatcgaggacagccatgacactgtgcacgtccatgttcaaggtatcgtg
ttccactaccgggccttaatggggcgctacactttgacttttgagaaagcgaaggcagca
tgtgcccagaacagtgcagttattgcttctcctgagcagcttcaagcagcatttgatgat
ggtttccaccagtgcgatgctggctggttgtctgatcaaacagtgcggtacccaatccat
gagcctcggatgaactgctatggcgacaaagaagaacttcctggggtcaggacgtatgga
gtgagaaatctaaatgagacatatgatgtttactgctttgcagataggatgacaggtaga
gttttccacactgtttctgcaagaaagttaaccttctatgaggctgcgctggcatgcgtc
aaccagggagctcagctagccaccacaggtcagctgtaccttgcatggcaggggggtatg
gatgtctgcaatgctggctggctgggagatgggagtgtccgctacccaatcaacgttcaa
cggccacagtgtggagggggtctgctggggatgcgaactgtttatcgctacataaaccag
acaggatacccacttcctgattcccgctatgatgccttctgttacacagattccccagat
gatgagggctcaggcaccgatgagggaagtggtgttctgattgttaccacagtgacaaag
agtcctgaggtgttcttcagcaggacgaccacagagagcgaagcagttggagagctggag
actcagcaaccgttcaatctgaactacacctacagcgagagcctaaacaagcaggcactg
cctcagccaacaaatatcacacagatctcctttgaccttattgaggccatcaccaaccag
ccagctgtacacatggagaccaggaaaacatctttcatctccccagctggtgtggtcttc
cattaccgctcacctactggccgatatgctttcacatttgttgaggcccagttggcctgc
cagggtgttggaggctccatggcaacgccacaacagctgcagcaagcatatgaggctgga
tatcatcaatgtgatgcaggttggcttctcgaccagactgttaggtatcccattgtgttt
cctcgagaaaagtgtgctggagattttggagagaaacctggagttcggacatatggcctc
agaccggcagatgagagatacgatgtttactgctacactgaggggatcaaaggagaggtt
tttcacgtgggatctgctgagggtttcacctatgatgaggctctttctgcctgtgaaaac
cacagtgcagtgctggcatccaccggagagctctacgcagcctggaaaatgggcttggac
aagtgccgtgcaggctggttactggatcgtagcgtccgctatcctctcaacagcccccga
cctgggtgtggagaagagaagtcaggggtgtacactttatactcaaaccccaaccagaca
cactatcctgaaaccgatgccagatttgatgcatactgtttaagagctgactttctgcct
gaagcaaatgaaactggactgaacaccacaggtatcctgaaagctctatggaacctgacg
tcagttactgacttattaaggcctgatgcttccttcatcgttcctcccatccctgtggag
aagtcaggttctggctctggttcagcaaactttgattcaggctctgaaggagatccctct
gcagaacagtccagctctggagatcagggtatctccggagatctgtctggttctggagac
caggttacctctggagaaccgtctggttctggagaccagattatctctggagaactgtct
ggttctggagaccagattacttctggagaaccgtctggttctggataccagattatctcc
ggagatctgtctggttctggagaccaagatgggtttggaaagactgtgttgtccaatgga
ggatccggtttgggaagtgcagctggttcgggatcaggactcagtgaagtgggatccggc
atcacagttgttttctctggagctgacagtgttgtatcaggagaaggcttcactttagga
gaacttcaagaagctggagagggaagcacaggaatttttatctttcctttgttgtccgga
gctggttccagagtgctgagtaaaagtggagacaggtccgggtctgggtctagatttgac
tccattgataaagattcttcagaataccgttctgtgcaaactggacgtctcactgacatg
acatcaggttttatcttgggccaggagttctcaggttttaatggttttccatcaggatct
tcttctggaagtggaagtgaacaatctagagccttttctggaagtgcagatgctcagatc
ttactgatagatgacaaactgattgatgcaactattgccaagaaagagtacaagcttagt
ggaggcccactggatttcagtggttctggagacttatcaggatctgggactctgagtagt
gatcacagtgggtcaagctctggaagtggttctgagttctttactggtttgactttcatg
ggttcaggcttcacggaacttattgtgtcaacttctggagaacacgaggaggcctctgga
ggtgtattctacagctttgaacagggaagtggggtgcagatatctggatttggaatctca
agtttcacttctgggtcttttgtttctggatctgggttctcaggatctgaaacacctaca
gccagagatgagggctatgttacatttctcactgaaggtctaatgacagaaataactggt
caggataaaatgcctctggagcttggagagggctcagtggagcacagtggagtcacaagg
ggtgacaccggttcctactctggtgatggagacaaggactcatttaaggacaactccttg
atgttaggggtttcttctggagattcttctgatccatctgtggtaatgttactcactcca
ttagttgacccagcagttacagagcccaccacaggaacagaggaaaatattcatggagct
gaactgatagaaaagtccagagtttatatgactccaggtccaacaattgttcctgcagga
ctggcagctcctcctgcagaagccagaccagcctttccacagatgacacacatcatagaa
gccttcaatccatgtgaaccaaatccttgtggcaatgcttcatgcacagtggaggaagga
gttgctctctgctttgaggcagaagtgtgccatcccaacccttgtgccaatggagccacc
tgtgtggagagtgcagactctttcaaatgcttatgcctacccagctacggaggggagcgc
tgtgagaccgaggagcaattgtgtgaagacggctggacaaagtttcagggaaactgctac
ctgcacatctctgacagggaggagtggctggaggcagagaaacgctgcagggacctgaac
tcacacctggtcagcatcatcacaccagaggagcaacagtttgtcagcgctagtgtccag
gactaccagtggatcggcctgaatgacaaaacagtggagaacgatttccagtggactgac
ggcactccactgcaatacgagaactggaagctgaatcagccagataactactttaaccca
ggagaggactgcgtggtgatgatctggcatgacagcggcaagtggaacgacgtgccctgc
aactaccacctacccttcacctgcaagaaaggaccagtgtcctgtggggctccgcctgtg
gtgaaaaacgctcatatgtttggaaacaggaggccgaagtatcctgtcaactccatcatc
cgttatcagtgcaactcaggatttcgacagcggcatctaccggtggtccgatgtcaggct
gacgggcagtgggagaaatccaaagtggagtgtacagatgtcaagccaagatcagaatac
acggcaggaccagcgggaattcatcagcgggaggcaaaaacaaataaacttaatttagtt
taa
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