Girardinichthys multiradiatus (darkedged splitfin): 124866860
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Entry
124866860 CDS
T08099
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124866860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmu03036
]
124866860
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
124866860
REST complex
124866860
Heterochromatin formation proteins
Other heterochromatin formation proteins
124866860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
124866860
NCBI-ProteinID:
XP_047218821
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All DBs
Position
4:47121703..47141466
Genome browser
AA seq
1286 aa
AA seq
DB search
MKRRAEDPEPIFVQQQPRHPTVQGVGEGFQQRALVPAAPVVEAAADNMQPSTGIQYSLPQ
AYQVPTMPQSTSGHGHNSTTPHIGPHTHSLAVQSQVPAVVPGHVHPPTPIASVQGQQQQF
QRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPDL
IMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPQGISVQNIPATVASSQPSSHHQHQS
LPQTSLHTTTTPTIATQPALNKASKLIQSPAHTPSSQPNPSIPSYASPRSPSGQPHTPVS
STPSSGPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGG
NYTPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSVLLGKSPPDRAESVRNDHGPT
VKRPSLNNKQRLSQNGLPIRRPAAVGSTLPFKKKALVIGKGHGMAEVGKVSTSTETMFFE
KVKKALRSSEAYDNFLRCLQIFNQEVISRTELVQLVIPFLGKFPELFTWFKNFLGYRESS
HGEVSHAESLPKERSTEGIAMEIDYASCKKLGSSYRALPKSYQQPKCTGRTPLCREVLND
TWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDIVLENNLATIRALETVQRRLSRM
SAEEQLRFRLDNTMGGSSEVIHRKAIQRIYGDKAPDIIDGLKRNPAVSVPIVLKRLKMKE
EEWKEAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIEMLYEDRHER
ASEETATPPPSGPHVTLTYDDCQILEDAAALIIHHVKRQVGIQKEDKFKIKQIINHFIPD
LLFARRGELSDLEEEEEEEMETNQDGPKKHNGLPGRSPSKSKLLFGNTAAQKPWGTDDAY
NLFFVNNYWYVFFRLHHILCSRLLRIYGQAEKQIEEDTNEREWEREALGLKRDKNENPAI
QLKMKEPMDVDVEDYYSVFLEMVRNLLDGNMEPAQYEDSLREMFTIHAYIAFTMDKLIQS
IVRQLQHLVTDELCVRVTDMYLSESAKKATGGTISTQASRATAEGTYQRKSEQLMSDENC
FKLMFMNNLGSVSLAMELLDTEEENSDEPADAEKWSDYVSRYLNSDSASPELREHLAQKP
VFLPRNLRRIRKCQRGWEQLQQERITKGSSDKLQDGSSELKMECMFKLNSYKMVYVCKSE
DYMYRHTALSRAHQSHQRVNTRLHKCFHTWLDTWAQKHVTSEMAANTNKWLMGDAKEGLL
SCTTTCCPEVLHYLNINKYRVQYRTL
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacgcgcagaagacccggaaccgattttcgtacaacagcaaccacgccatccc
acagttcagggcgttggtgaaggctttcagcaacgggcccttgtcccagcagcgcctgtt
gttgaggccgctgcagataacatgcagccctcaactggtatccagtactctcttcctcag
gcctaccaggtgcctactatgcctcaaagcacaagtggacatggacacaacagtactacg
cctcatattggccctcatacacacagcttggctgtccagtcacaggtacctgcagtggtc
ccaggtcacgttcatccacctacacccatagcttcagtgcaaggacagcagcagcagttt
cagcgattaaaggttgaagatgccttgtcctatctggatcaagtgaagttgcagtttggt
aatcagcctcaagtttataatgatttccttgatattatgaaagagttcaaatctcagagc
attgacactcctggagtcatcaaccgcgtgtcgcagctctttaagggccacccagacctt
attatgggttttaacacgttcttgccacctggttataagatcgaagttcaaaccaacgat
ttggtcaacgtgaccacacctggtcagatacactacataacccctcaaggtatatctgta
caaaacatcccagctactgtagcatccagccaaccctctagccaccaccagcatcagagt
ctcccacagaccagcctgcacaccaccaccaccccaacaatcgccactcagcctgcttta
aacaaagccagcaagcttattcagtctccggcccacacacccagcagccagccaaatccg
tccatcccatcatacgcctcgccgcgttctccttcaggtcagccacacactccagtcagc
agcacaccatccagtggaccacctctccagaacaaccaacctgtggagtttaaccacgcc
ataaattacgtcaacaagatcaagaaccgctttcagggccagccagatatctacaaagct
ttcctggaaatcctgcacacataccagaaagaacagcgaaatgctaaagaggccggtggt
aattacacgccagctctgactgaacaggaggtgtacactcaagtggccagactttttaag
aaccaggaggacctgctgtcagaatttggacagttcctgccagatgcaaacagctcagtg
ctgctggggaagagtccaccagacagagctgagtcggtccgtaatgaccacggtcccaca
gtaaagagaccctcactgaacaacaaacagaggctgagtcaaaatggtctgccaatcagg
agacctgctgcagtgggatccacgctgcctttcaagaaaaaggcacttgtcatcggaaag
ggccacggcatggccgaagtcggtaaagtcagcaccagcactgaaaccatgttctttgag
aaggtgaagaaggcactacggagctcagaggcatatgacaacttcctccgatgtctgcag
atcttcaaccaggaagtgatttctcgcactgagctggtccagttagttatcccgtttctt
ggaaaatttccagagctatttacttggtttaaaaacttcttgggctatcgcgagtctagt
catggagaggtgagtcatgcagaaagtttacccaaggagcgttctacagagggtatagcc
atggagatcgactacgcttcctgcaagaagctggggtccagctacagagcactgccgaag
agctatcagcagccgaagtgcacgggaagaacaccgttgtgcagagaggttttgaacgat
acatgggtatcttttccatcgtggtccgaggattccacattcgtgagctccaagaagact
cagtatgaggagcacatttacagatgtgaagatgaacgctttgagctggacatcgtgttg
gaaaataacctcgccacgatacgagctctggagacggtgcaacggaggctttctcgcatg
tcagctgaggagcagctgcgattcaggctggacaacacaatgggtggctcctccgaggtt
attcatcgtaaagccattcagaggatatacggagacaaagcacctgacatcatcgacggc
ctgaagagaaaccccgctgtgtctgtacccatcgtcctgaaaaggttaaaaatgaaggag
gaggagtggaaagaagcacagagagggttcaacaaaatctggcgggaacagaatgagaag
tattacctgaagtcgcttgaccatcaaggcataaacttcaagcaaaatgacaccaaagtg
ctgcgatcgaagtctttacttaatgaaatcgagatgttatatgaagatcgccacgagaga
gcctcagaggagactgccaccccaccaccgagcggtcctcacgtaactctgacctacgat
gattgccagatcctggaggacgctgctgctcttatcatccatcatgtcaaacgacaagtg
ggcattcagaaagaagacaagttcaagatcaaacaaataatcaaccactttatccccgac
cttctgtttgcacgccgtggcgagctatctgacctggaggaagaggaggaagaagaaatg
gagacgaaccaagacggcccgaagaagcacaacggtctgccaggccgcagtccatcaaag
tccaagctcttgtttggcaacacggcagctcaaaaaccttggggcacagatgatgcttat
aacctgttcttcgtaaacaactattggtatgtctttttccgcctccatcacatcctctgc
tctcgtttgctgcggatctatgggcaggctgagaagcagattgaggaggacaccaacgaa
cgagagtgggaaagggaagcgctaggcctgaaaagagacaagaatgaaaatccagccatc
cagctgaagatgaaggagccaatggacgttgacgttgaagactactattctgtgtttctg
gagatggtgcgaaatcttttggacggtaacatggagccggcacagtacgaggactccctg
agggaaatgtttacgatccacgcctacattgccttcaccatggacaaactaatccagagc
attgtccggcagctccaacacctcgtaaccgatgaattatgtgtgcgtgtaacggacatg
tacctgagtgaaagtgccaagaaagccacagggggcactatttccacacaggcatccaga
gctactgcagaggggacctaccagcgcaagtcagagcagcttatgtcagatgaaaactgc
ttcaagttgatgttcatgaacaaccttggatcagtgagtttggcaatggagctgctggat
acagaagaggagaactctgatgagccagcagatgcagaaaaatggtcggactacgtgagc
aggtacttgaactcagattctgcatccccggagctgcgtgagcatttggcccagaaacca
gttttcctccccaggaatttgagacggatacgaaaatgccagagaggatgggagcagctg
cagcaggaacggatcacaaaaggctcctcagacaagctgcaggatggcagcagtgagctg
aagatggagtgcatgttcaaactcaactcctacaagatggtttatgtctgcaagtcagag
gactacatgtacaggcacactgcactctcaagagctcatcagtcccaccagcgagtgaac
acacgtctgcacaaatgctttcacacctggctggacacctgggcccagaagcacgtgacg
agtgaaatggccgccaacactaacaagtggctgatgggcgatgcaaaagagggactgttg
tcttgtaccaccacctgctgccccgaagtcctccactatctcaacattaacaagtaccgg
gtgcagtacagaacactgtag
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