Girardinichthys multiradiatus (darkedged splitfin): 124866892
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Entry
124866892 CDS
T08099
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124866892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
124866892
Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
124866892
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
ADAMTS_CR_3
TSP1_spondin
TSP1_CCN
PLAC
Motif
Other DBs
NCBI-GeneID:
124866892
NCBI-ProteinID:
XP_047218880
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All DBs
Position
4:37986858..38036672
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AA seq
942 aa
AA seq
DB search
MLEVGCWTVRLSVLLLLWSQLLDSQQTADHRKVPQTTESQQEFRAEYGEIQGAWGTWGAW
SSCSRTCGKGVQEQMRPCLPVYTQSPPRGAAVQPQQPGHVISALKPVASTHHNGVRAFNS
SSRVNPRREKQSRPGERRRVTHIVPGRYGYGRAPHVAPLLVDSSRGSGSPRLHRQGRSAA
VNSLQLVARGHTDLRSNKLDASNNLHRFTRPYVHPRTLHQRNSQVWDSLYQPISANQAEV
QAGSQTSSHQLHKERPYSPLPSSFCTGEHAHYRICNSNDCPPSSEDIRAVQCSSYNNQPF
MGRLYKWEPFNEVPGGQHCELNCRAIGFRFYVRQSDRVIDGTPCRQNETHLCVAGRCTGL
GCDEYLGSGKVVDKCGVCGGDNTTCRLVSGMFKHSLSKIGYHKIVEIPEGATKINVTEMV
KSRNYLALRSRSGRSIINGNWAIDRPGKYEGGGTMFTYRRPNEISSKAGESFLAEGPTNE
ILEVYMIFQQPNPGIHYEYVLPSENTVKPQQTTHTDEGGGRHQPHLPNNQVPAVVPPKHD
REYNWILTGTTECSASCGKGFRYSVFHCVHRLNNVEVSNALCESSSHPAPQEEACNLQPC
PAFWDIGEWSECSKTCGLGMQHRQVPCRQVYANRTLNVHMSRCRHLEQPETASTCQLKIC
SEWQIRSEWTACSVPCGLGQRSREVRCVSNVGDFVPDQECNMNLRPTNIENCDMGACAKS
WFYTEWGNRCSAECGMGVQTRGVLCLTNHISSLPLEGCGSERPADSQVCNNGPCDNRIEW
FTGPWSQCSAECGTGSQQRSVVCLMKSDEGFTVMPPYECSSFDQPLSQQSCNIKTCGAKW
YHTDWSACSKTCEEGFRVREVRCLSDDMLSSEACDEQLRPVEREDCSPEPCIPQIDLNCR
DKYFNCNVVFQARLCVYDYYQTACCASCSRMAHKQKTHRGRS
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgctagaagtcgggtgttggaccgttagactatctgttctgctgctgctttggtcacaa
ctcctggacagtcaacaaacagcagatcacaggaaggtgcctcagacgacagagtctcaa
caggagttcagggccgagtatggggaaattcagggtgcctggggcacctggggcgcctgg
tcaagctgctcccggacatgtgggaaaggagtacaagaacagatgaggccctgtctgcct
gtgtacactcaatccccccccagaggagctgctgttcagcctcagcagccaggccatgtc
atttcagctttgaagcctgttgcttctacacaccacaatggagtcagagcctttaacagc
agcagcagggtaaacccgaggagggagaagcagagcaggccaggcgaacgcaggagagtc
actcacattgtcccagggaggtatggctatggacgagcacctcatgttgctccactgcta
gtggattccagccgaggctcaggttcccctcgcctccacagacagggacgctctgctgca
gttaattccctccagctcgttgctagagggcacaccgacctcagatcaaacaaactggat
gcctccaacaacctccatcgctttaccagaccgtatgtgcatcccaggacactacatcaa
aggaatagtcaagtctgggactccctttaccagcctatttcagctaaccaggctgaggtc
caggcaggcagtcagacctcgagccaccagctgcataaagagagaccttacagcccactg
ccttcttccttctgcacaggggagcatgctcactacaggatctgcaacagtaatgattgt
cctccatccagtgaagacatcagagcggtccaatgttcttcctacaataaccagcctttc
atgggcaggctctacaagtgggagccttttaatgaagttcctggggggcagcactgtgaa
ctaaactgtcgggccattgggttcagattctacgtgcgacagtccgatagggtgattgat
ggtactccatgcagacagaatgaaacacatctgtgtgtggcgggacggtgtacgggcctt
ggctgcgatgagtatcttggatctgggaaagtggttgacaagtgcggcgtgtgcggtggt
gacaacacaacctgcaggctggtctcaggaatgttcaaacacagcttgtccaagattggc
taccacaaaatagtggaaataccagagggagccacaaagatcaacgtaacagagatggtg
aagagcaggaattaccttgctcttcgaagccgttcaggaagatccattataaatggaaac
tgggctattgacagaccagggaaatatgagggtgggggtaccatgtttacctaccgcaga
cccaatgagatcagcagcaaagccggggaatcctttcttgctgagggccccactaatgaa
atcctggaggtttatatgatctttcagcagccaaaccctgggattcactatgagtacgtt
ctcccctctgagaacaccgtcaagcctcagcaaacaacccacacagatgaaggtggggga
aggcatcaaccacatcttcctaacaaccaggtacctgctgttgttcctccaaaacatgac
agggagtacaactggatactgactggtaccacagaatgcagcgcctcctgtggaaaaggt
ttcaggtattcagtctttcactgcgtccaccggctgaataatgtcgaggtgtcaaatgct
ttgtgtgaaagcagcagccacccagctccacaggaggaggcctgcaacctgcagccctgc
ccagcattttgggacattggagagtggtcggagtgcagcaagacctgtgggctgggcatg
cagcaccggcaggtcccgtgtcgacaggtttacgccaaccgtacccttaacgtccacatg
agccgctgtcgacacttggagcaacccgaaacagccagtacctgccagctgaagatctgc
agcgagtggcagatccgctccgagtggaccgcttgttcggtgccgtgcgggctaggtcag
aggtcaagagaggtgcgctgcgtcagcaacgtgggcgactttgttcctgatcaggagtgc
aacatgaatctgcgacccaccaatatagaaaactgcgatatgggcgcctgcgccaagagt
tggttctacactgagtggggaaacaggtgctctgctgaatgtgggatgggtgtccaaacc
cgtggagttctttgcctgactaaccacatcagcagcctccctctggagggatgtggcagt
gagcggcctgcagactcccaggtctgcaacaatggcccctgtgacaatcgtatcgagtgg
ttcacaggtccctggagccagtgctctgcagaatgtggcacaggcagtcagcagaggtca
gtggtgtgcttaatgaagtctgatgaaggatttaccgtcatgccaccctatgaatgctca
tcctttgaccaaccgctcagtcagcagagctgcaatataaagacctgtggagcaaagtgg
taccacactgactggagtgcttgttcaaaaacatgcgaggaaggtttccgcgtgcgggag
gtgcgctgtttgtcagacgacatgctgtcctcagaggcctgtgatgagcagctgagacca
gtagagagggaggactgtagcccagagccctgcatacctcagatagatctgaactgcaga
gacaagtacttcaactgcaatgtggtattccaggctcgcctctgtgtgtacgattattac
caaacagcgtgctgtgcttcatgttcacgcatggcacacaaacagaaaacccatcgaggt
cgcagctag
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