Girardinichthys multiradiatus (darkedged splitfin): 124866954
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Entry
124866954 CDS
T08099
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124866954 (ctr9)
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
124866954 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_8
TPR_12
TPR_17
TPR_10
TPR_7
TPR_11
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
124866954
NCBI-ProteinID:
XP_047218991
LinkDB
All DBs
Position
4:26868511..26881227
Genome browser
AA seq
1155 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYK
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNNKDSESIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKTYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLDR
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHIAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATAEISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLQDCKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRSFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDLLRQQMLKEQEERQKREADEQKKLLEQRALFVEKTKNLLTFVEGPKESTK
EKKKGGGGGGSRRKKGGDVDDFVNDDSDEDLPVKKKKRRKSSGSEQEDGEEGEKKKKRRR
RPAKGGDDSDDEEGSSRPKKQRKPKEGRRKIEKQLPERMPPSLKGKIKSKAIISSSESSS
DEDGLKIAEDRNRDSGSGSEDEGGHRKRIASDSGSDGGRNRSGSEAGSPRRSVGSDDESG
SDRPVKKRRVQRQSDSEQSDNESKRSQSGSDDESRAASPAAASDRGSEPGSDNEGFPQHS
DNGSEQEGSNNDDSD
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggttccattgagatccctttacgggacacagatgaggttatcgagctcgac
ttcgaccagctgccagagggagacgaggttatcagcatcttgaagcaggaacatacacag
ctgcacatttggattgctttagcgttggagtattacaaacaaggcaaaacagaggatttt
gtcaagcttttagaggcagcgcgtattgatggaaacctggattacagagaccatgagaag
gaccagatgacctgcttggacacgttagcagcttactatgtccagcaggctcgtaaagag
aaaaacaaagatgccaagaaggagctcatcacgcaggccacgctgctgtacaccatggcg
gataagatcatcatgtatgatcagaaccatttgttgggtcgagcctgtttctgcctgctg
gaaggagacaagatggaccaggctgatgctcagttccactttgtgctcaatcagtccacc
aataacatccccgctttgcttggtaaggcctgcatctcgttcaataagaaggactacaaa
ggagcgctggcgtactacaaaaaggctttacgaacaaaccctggctgcccagctgaagta
agactggggatgggtcactgctttgtcaagctaaataaactggagaaggcccgtttggcg
ttcggccgagccctggagctaaactctaagtgtgtgggagccctggttggtttggcagtt
ttagagctcaacaacaaagattcagaatctattaagaacggagtgcaactgctgtcgcgg
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctcgccaaccacttcttt
ttcaaaaaggactacagtaaagtccaacatcttgccctgcatgctttccacaacacagag
gttgaggccatgcaggctgagagctgctatcaattagcacgttcatttcacgtgcaggag
gactacgaccaggcgtttcagtattactaccaggccactcagttcgcctcttccaccttt
gtgctgcccttctttggtttaggacagatgtatgtgtatcgtagggacaaggaaaatgct
gcacagtgcttcgaaaaggttttaaagacttacccaaacaactacgaaacgatgaaaatc
ctgggatctctctacgcaacatccgacgatcaggaaaagagagacatcgcaaaaggccac
ttgaagaaggtgacagagcagtacccagatgatgtggaggcgtggattgagctggctcag
atcttggagcagaccgacatccagggcgcgttgtcggcttacggcacggccactcgcatc
ctccaggagaaggtgcaggccgacgttccccctgaaatccttaacaaccttggggcccta
cacttcagactgggcaaccttggggaggcaaagaaatattttcttgcatccctggaccga
gcgaaagctgagggagagcatgacgagcattactacaatgctatttccgttaccacgtcc
tacaacctggcccgtttgtacgaggccatgtgtgaatttcacgaagccgagaaactctat
aaaaacatcctcagagagcatcctaactacgtggactgttatttgcgtcttggagcgatg
gctcgtgacaaaggaaacttctacgaagcgtctgattggtttaaagaagccctgcagatt
aatcaggatcacccagacgcctggtcgctcatcggaaatcttcacatagccaaacaggag
tggggtccgggtcagaagaagtttgagcgtatcctgaagcagccgtccactcagaacgac
acgtactccatgctggctctgggtaacgtgtggctgcagactctgcaccagcccaccaga
gacagggaaaaggaaaagagacatcaggatcgggccttggcaatatacaaacaagtcctg
cgaaatgatgccaaaaacctctacgctgctaacgggatcggggccgtgctcgctcataaa
ggttacttccgagaggcgcgtgacgtgtttgctcaggtgagagaggccacagcagaaatc
agtgacgtctggctgaatctggctcacatctacgtggagcagaagcagtacatcagtgcc
gtgcagatgtatgaaaactgcttgaagaaattttacaaatatcagaacacggaagtgctg
ctttatcttgcgagagctctcttcaaatgtgggaaactccaggactgcaagcagatgctg
ctgaaggctcggcatgtggcgcccagtgacacggtgctgatgttcaacgtggctctggtg
cttcaaagactcgccactcttgtgctgaaagatgagaagagcaacttaaaggctgtgctc
agtgctgtgaaagagcttgaactggctcacagatctttcagctacctcagcaaagctgga
gacaagatgaggtttgacctcgctcttgctgcgtctgaagctaggcagtgctctgacctg
ctcagtcaggctcagtaccatgtggccagagccagaaagcaggatgaagaggagaaggag
cttcgcgccaaacaggaacaagagagggacctgctgcgccagcagatgttaaaagaacag
gaagaacggcaaaaaagagaagcagatgagcagaagaagctcctggagcagagagcttta
tttgtggagaagaccaagaacttgctcacgtttgtggaaggacccaaagaatcgaccaaa
gaaaagaagaagggtggaggaggcggcggaagccgtcgtaagaaaggaggcgatgtggat
gactttgtaaatgacgattctgatgaggaccttccagttaaaaagaagaagaggagaaag
agcagcggcagcgaacaggaagatggcgaggaaggagagaagaagaaaaagaggaggagg
agacctgcaaaaggaggagacgacagcgatgatgaggaagggtcatctagacccaaaaag
cagcgtaaacccaaagaaggacgcaggaagattgagaagcaactgccggagcgcatgcca
ccatctcttaaagggaagatcaagtccaaggctatcatctcctcttctgaatcctcatca
gatgaggacggactgaaaatagcagaagacagaaaccgagacagcggctcaggatctgaa
gacgaaggcggtcacaggaagcgcatagcgtccgacagtggctcagacggtgggaggaat
cgttctggcagtgaggcaggcagccctcgacgctctgttgggtcagacgacgaatctggc
agcgaccgtcctgtaaagaagaggagggtgcagcgacagtctgactctgaacagtcggac
aacgagagcaagaggagccagtcgggatcggacgatgagtcgcgagccgcttcccccgct
gctgcatcagacagaggatctgagcctgggtcagacaacgaaggcttcccacagcactct
gataacggttcagaacaggaggggtccaataacgatgatagtgattag
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