Girardinichthys multiradiatus (darkedged splitfin): 124867019
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Entry
124867019 CDS
T08099
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124867019 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124867019 (vps35)
Membrane trafficking [BR:
gmu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
124867019 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
124867019
NCBI-ProteinID:
XP_047219145
LinkDB
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Position
4:complement(2362331..2408329)
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AA seq
849 aa
AA seq
DB search
MQRWAQDTVALLTDPDKADKGSLHPSISQQLTDNSGTPARRKKQPHPQGTQCPTTQQSAQ
DEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYELYMA
ISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVRSFPQSRKDI
LKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQVEGSEEMTGDINDSIDFVLLNF
AEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKYKQIVLPGVL
EQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNIIIALIDRLA
LFANREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDIVSLQVSLINLAMKCYPERVD
YVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNVLMVLQLKHFPPLFEY
FDFESRKSMSCYVLSNTLESNTIIVSQEQVDAILSLVSTLIQDQPDQPADDPDPEDFAEE
QSLVGRFIHLFHSEDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQLAFRYKANS
SLDDKWEKKCQKIFSFAHQTISALIKAELSELPLRLFLQGALAAGEIGFENHETVAYEFM
SQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAASKLLKKPDQC
RAVSICAHLFWSGRSTDKNGEEIRDGKRVMECLKKALKIANQCMDSSLQVQLFIEILNRY
ICFYERENDAVTLQVLNQLIQKIREDLPNLEASEETEQINKHFNNTLEHLRLQRESPESE
GPAYDGLVL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatgggctcaagacacagtagccctccttaccgaccctgacaaagccgacaaa
ggatccctgcatccttccatctcccagcaactgaccgacaactcagggacccctgcaaga
cgaaagaagcaaccccaccctcagggtacccaatgcccaaccacgcagcagtcagctcag
gatgaacaagagaagctcctggatgaagctgttcaagctgtcaaggtccagtccttccag
atgaagcgatgcttggataagaacaaactgatggatgctttaaagcatgcctccaacatg
ctgggtgaactgaggacatctatgctctctccaaagagctactatgagttatacatggcc
atctctgatgaactgcactaccttgaggtttatttgaccgatgagtttgccaagggacgc
aaagtggcggatctttatgagctggtccagtatgctgggaacatcatacccaggctctat
ctactgatcacagtgggcgtggtgtatgttcgctcctttcctcagtctcgcaaagacatt
ctgaaagacttggtagagatgtgtcgtggcgtccagcacccactcaggggtctcttcctc
agaaattacctgttgcagtgtacccgtaacattctaccagatgatggagaacaagtggag
ggatcagaggaaatgactggagatattaatgactccattgacttcgtcctcctgaacttt
gctgaaatgaacaaactgtgggttcgaatgcagcatcagggtcacagcagagacagagag
aagagagaaaaagaacgacaggaacttaggatcttggtgggcaccaatctggttcgcctc
agtcaactggagggggttaatgtggacaagtacaaacagattgttcttcccggagtgctg
gagcaggttgtgaactgtagagattcattggctcaggaatacctaatggagtgtattatt
caggttttcccagatgagtttcatcttcagaccctgaatccttttctgcgttcctgtgct
gagttgcatcaacatgtcaacgtcaagaacatcatcattgcacttattgacagacttgct
ctatttgctaatagagaagatggtccaggcattccagctgagatcaaattgtttgacatt
ttctctcaacaagtggccactgtcattcaatctcgtcaggacatgccatcagaggacata
gtgtctttacaagtctctctcatcaatttggctatgaagtgctaccctgagcgtgtcgac
tatgtagacaaggttctggaaagcacagtagaaatatttaacaagctcaacttggaacac
atagcgaccagtagtgctgtgtccaaagaacttactcgtctgttaaagataccagtggat
acctacaacaatgtgctgatggtgctgcaactcaagcacttcccaccactctttgaatac
tttgactttgagtcccgcaagagcatgagttgttacgtactgagcaacacgctggagtcc
aacaccatcattgtttcgcaggaacaggtggatgcaatcttaagcttggtgtccacactg
atacaagaccagccagaccaaccagctgatgaccctgacccagaggattttgctgaggag
cagagtcttgttggtcgtttcattcatctgttccactctgaagatcctgatcagcagtat
cttattcttaacaccgctcggaaacattttggtgctgggggaaaccagaggattcgctat
actctgcctcctctggtgtttgctgcctaccagctggcttttcgatacaaagccaactca
tcactggacgacaagtgggaaaagaaatgccagaagatcttttcctttgcccaccagacc
atcagtgcgcttatcaaggctgagctttctgagttgcctttgcgactgttcctgcaggga
gcgctggctgctggggaaattggctttgaaaatcatgaaactgtggcgtatgagtttatg
tcacaggccttttctctgtatgaggatgagattagcgactccaaagcccagctggcagcc
attactctgatcattggcacctttgagcgaatgagatgtttcagtgaggaaaaccacgag
cctttgaggactcagtgtgcactggctgcttccaaacttttaaagaagccagatcagtgc
agagctgtcagcatatgcgcccatctcttttggtcaggtcgcagcactgacaaaaatggc
gaagagatccgtgatgggaagcgggtgatggagtgtctaaagaaagccctgaagattgcc
aaccagtgcatggattcatcattgcaagtccagcttttcattgaaatcctcaacagatac
atctgcttttatgagagggaaaatgatgcggtgactctccaggtactaaaccagttaatc
caaaagatcagggaagatcttcctaacctggaggcaagtgaagaaacagagcagataaac
aaacatttcaacaacacgctggagcatctccgtctgcagagagagtctcctgaatctgag
ggacctgcttacgatggattggtcctttaa
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