Girardinichthys multiradiatus (darkedged splitfin): 124867063
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Entry
124867063 CDS
T08099
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124867063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124867063
03021 Transcription machinery [BR:
gmu03021
]
124867063
Transcription factors [BR:
gmu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
124867063
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124867063
RNA polymerase III system
TFIIIB
124867063
RNA polymerase I system
SL1/TIF-1B
124867063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
124867063
NCBI-ProteinID:
XP_047219234
LinkDB
All DBs
Position
4:36597001..36603272
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AA seq
302 aa
AA seq
DB search
MDQNNSLPPFQGLPSPQGAMTPGITMFSPMISYGSGLTPQPVQNTNSLSILEEQQRQQQQ
QQQAQQPSAGLPGTSGQTPQLYHSQTGPVSTTTGLPGSTGLYSTSIGPMTPHTPATPASE
SSGIVPTLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSG
KMVCTGAKSEDESRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTH
QQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK
TT
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaaacaacagtttaccacccttccaagggctgccttctcctcagggtgccatg
accccaggcataacaatgttcagtcccatgatatcatatggatcaggcttgacaccccag
cctgtacagaacacaaacagtttgtctatactcgaggagcagcagaggcaacaacagcag
caacagcaagcacaacagcccagtgcagggcttccgggaacgtcagggcagactccgcaa
ctatatcattcccagacaggaccagtgtcgactaccactggtctgccaggaagcaccggg
ctctacagcacttcgatcggccccatgaccccccacaccccggccacacctgcttcggag
agctcaggcatcgttccaacgctacaaaacatagtatccactgtaaatctgggctgtaaa
ctggatctgaagactattgccctgagagccaggaatgcggagtacaaccccaagcgtttt
gctgccgtcatcatgagaataagagagcccaggaccactgcacttatcttcagctccggg
aagatggtttgcaccggagcaaagagtgaggatgagtcgaggttagcagctagaaagtat
gcccgtgtcgtgcagaagctgggttttccagccaagttcttggacttcaagattcagaat
atggtgggcagttgtgatgtgaagttccccattcgactggagggattggtcctcacacat
cagcagttcagcagctatgagccagagctgtttccaggactgatttatagaatgatcaaa
cccaggattgtcctgctaatctttgtttctgggaaggtagtactcacaggggccaaggtg
agagcagagatctacgaagcatttgaaaacatctaccccatcctgaaaggttttcggaag
actacgtag
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