Girardinichthys multiradiatus (darkedged splitfin): 124867075
Help
Entry
124867075 CDS
T08099
Symbol
tgfbrap1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 homolog
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124867075 (tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124867075 (tgfbrap1)
Membrane trafficking [BR:
gmu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124867075 (tgfbrap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
DUF7742
Motif
Other DBs
NCBI-GeneID:
124867075
NCBI-ProteinID:
XP_047219250
LinkDB
All DBs
Position
4:complement(21881084..21896372)
Genome browser
AA seq
876 aa
AA seq
DB search
MSVKAFELVPAVERDLLMGDKARINIECIEYCGKHLYVGTNDCFIHHFLLDEVTSSKGKL
SYSAQKLLHKYLGLKKPVAELRAASALERLIVLCDGIVFLIDMVTLESVPSAAGGGVKIR
GVTAFCVNENPVNGDPFCVEMAVLSSKRRTVQIYMVYEDRVQLIKEVNSPEQPCVVSIDG
YFLCLALTTQYMILNYNTGASQDLFPYNSEERRPIVKRISREEFLLAAPGGLGMFANSEG
ASQRAPVNWSESVIAAAVCFPYVVALDENFITIHSMLDQQLKQTLSFRDGHVLQDFEGKV
MLASTKAVYVLVPLPLERQIQDLLASHRVEEALVLTEGAQRNIPKDKFQILHRRILQQAG
FIKFGQLQFLDAKEHFRKGQLDVRELISLYPLLLPASSSFMRCHPPLHEFADLNHLAQGD
QEKVLQCKKFLISYLGEVRSTDVVNGCRDDVDTALLKLYAEQDHDSLLDLLASDNSCVLT
DSIPWLEKYHKYFALGLLYHFNGQDAAALQLWIRIVDGELQDCTRSGLYEYIVDFLCCSS
NMKMVWKYADWALRKDPTTGVHIFTKRPVSKGRSEVNPDEVITYLGKHSQALLLYLEHLV
LKRKIQKEKFHTHLAVLYLDRVMLLLSESPTDEGQLTKAREKLQAMLRESSLYRVQFVLG
KMENCEKLLLERATLHGKLEEHDKALHLLVHKLRDFPSAEAFCIWASSSRDPAYRQQLFH
LLLGVYLDGSPPGKAQGACGSRSEMEIAAVDLLNRHGEVFDALRVLQMLPENWSLQLLRP
FLNRAVRASMHTSRTSQIALGLTRSENVQLLHDRLKERRKPILVSEKKGCHLCHNTFSEP
NVVCLPGGVPVHIHCAAQRVRDSPTKKLLTNCSKHT
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaaggcctttgagcttgtccccgctgtggagcgcgacctcctcatgggcgac
aaagctcggatcaacattgagtgcatcgaatactgcggaaagcacctgtacgtgggcacc
aatgactgcttcatccaccacttcttgctggacgaggtcacttcttccaaaggcaaactg
agctactcagcccagaagctgcttcacaaatacctcggcctcaaaaaaccggttgccgag
ctgcgcgccgcttctgctttggagcgactcatagtgctttgcgacgggatagtgttcctc
atcgacatggtgacactggagtctgttccttcggcagctggcggtggggtcaaaatcaga
ggcgtgactgcgttctgcgttaacgagaaccccgtcaacggggatccgttctgcgtggaa
atggccgtgctgtcgtccaagaggcggacagttcagatttacatggtctatgaggacaga
gtgcagttgatcaaagaggtgaattctccggagcagccctgcgttgtcagtattgatgga
tacttcttgtgcttggccctcacaacgcagtacatgatcctgaactacaacacaggagct
tcgcaggacctcttcccttacaacagcgaggagaggagacctattgtgaagaggatcagc
cgggaggagttcctccttgcagctccgggtggtctcgggatgttcgccaactcagagggc
gcttctcagcgggctccggtcaattggtcggagagcgtgatcgctgccgctgtgtgtttt
ccgtatgtggttgctttggacgagaacttcatcaccatccacagcatgttggaccaacaa
ctgaaacagactctttcattcagggatggacacgtcctgcaagattttgaaggtaaagtc
atgctggcttccactaaggctgtttacgtcctggttcctctgccactggagaggcagatt
caagacttactggccagtcacagagtggaggaagctctggtcctaacagagggggctcag
agaaatattcccaaagacaagttccagattttgcacagaagaatccttcagcaggcgggt
ttcataaagtttggccagcttcagttcctggacgctaaagaacacttcaggaagggacag
ctggatgtcagggagctcatatctctctaccccttactgctaccagcttcctcctcgttc
atgcgctgccaccctcctcttcatgagtttgcagatctcaaccatctggcccaaggtgac
caagaaaaagtgctgcaatgcaagaagttccttatcagttatttaggagaggttcgcagc
acagacgtggtgaatggctgcagagacgacgtggacacggctctgttaaagctctatgcc
gagcaggatcatgacagtctgctagatctgctggcgtcagacaattcctgtgtgctcaca
gatagcattccatggctagagaaatatcacaaatattttgcacttgggctgctctatcat
tttaatggtcaggatgcagcagcactacagctgtggattcgcattgtagacggcgaacta
caggactgtacaagatcgggtctgtacgagtacattgtggactttctctgctgctcttcc
aatatgaagatggtgtggaagtatgcagactgggccttgcggaaggatcccactacgggt
gttcacatctttactaagaggcctgtctccaaaggtcgatcagaggtgaacccagacgag
gtcatcacctacctgggaaagcacagccaggctctgcttctctacttggaacacctggtg
ttgaagagaaaaatacagaaggagaagttccacacacacctggctgtgttgtacctggac
agggtcatgttgttgctgtcagagtcaccaacagatgaggggcagctgaccaaagccagg
gagaagctccaagccatgctcagggagtccagcttatatcgtgtacagtttgttttaggt
aaaatggagaactgtgaaaaactgctgctagagcgtgcaacactacatgggaaactagag
gagcacgacaaagcactgcacctgctggtgcacaaactcagagacttcccgtccgcagag
gccttctgcatctgggcctcgtccagtcgagatcctgcgtatcggcagcagctgtttcac
cttctcctgggtgtctaccttgatggcagccctcctggaaaagcccaaggggcctgtggc
agcaggagtgagatggagatagccgccgtggatctcttaaacaggcacggcgaggtgttc
gatgccctccgcgttctacagatgctcccggaaaactggtcgctgcagctgctgcggcct
ttcctaaaccgagccgtcagggccagcatgcacaccagccgtacctcccagatcgcattg
ggactcacccgctccgagaacgtgcagctgctgcatgacaggttgaaggagcgaaggaaa
ccgatcctcgtgtcagaaaagaagggatgccacttgtgccacaacaccttcagtgagccg
aatgtggtttgtctgcccggaggagtgcctgtccacatccactgtgccgcacagagagtt
cgagactctcccactaagaaactgttaaccaattgcagtaagcacacgtga
DBGET
integrated database retrieval system
