Girardinichthys multiradiatus (darkedged splitfin): 124867326
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Entry
124867326 CDS
T08099
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04137
Mitophagy - animal
gmu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124867326
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124867326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124867326
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
124867326
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124867326
Multi subunit type E3
ERAD complex
124867326
LMBR1L-GP78-UBAC2 complex
124867326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-RING_Vps41
zf_RING_Vps8
zf-C3HC4_4
zf_RING_Vps8_fungal
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
124867326
NCBI-ProteinID:
XP_047219683
LinkDB
All DBs
Position
4:complement(35390818..35408417)
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AA seq
622 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSVALLAGSIFSAYTTVTDPAFGALETDDTPAPSDVDLEHL
SNAVGNTELARTVLGYLITDSLFVWVLVNTFCCSLMLIAKMIQYAVFGPLRVSEKQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSALVFLHLMVQLSKDRFEYLSFSPSTPM
NSHVRVLCLLFSLLLDCCGLAVVCGLLGASHGMHTLSFMGAECLLVTVRTGHVIMRYSIH
LWDLNHPGTWESKGTYVYYTDFIMELAMLFLDLMHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRIRRHKNYLRVISNMEARFAVATAEELAANDDDCAICWDAMLTARKLPCGHLF
HNSCLRSWLEQDTSCPTCRTSLNINGDGVPGRNQQQGAGLEDNAGPVGPAPEARPHINQH
NHFFHFDGSRIASWLPSFSVEVMHTTNILGMAQANNSQLMGMAHQIQEMFPQVPSYLVIQ
DLQLTRSVEVTTDNILEGRIQVPFPAQAIDRAPIQGNPAADEQPGPSGGAEHNPSESDNM
EARGGRFSKSAEERQKMLKLRKEEMLQQARRRYLHKGQENHEEDLPRLGEDSLAELDLTV
LRRRTMAAAAERRMQHQEELAP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgttgtttctggagaggtttccttggcccagcctgcagacctacactgcacta
agcgtggctttgctggctggcagcatcttcagtgcttacactactgtcactgaccccgcg
tttggggccttggaaactgatgatacgccagctccctctgatgttgatcttgaacatctg
agcaatgcagttggtaacacagaactggccagaacagtcctggggtatttaattaccgac
agtctgtttgtatgggtgttagtgaacacattctgctgctctttgatgctaattgcaaaa
atgattcagtatgcggttttcggccccctcagagtcagtgagaaacagcatctcaaggat
aaattctggaacttcatcttttacaagttcattttcatatttggagtgttaaacgttcag
acggtggaagaagtggtcatgtggtgtttgtggttctcagccttggtctttctccatctc
atggttcagctcagcaaagatcgttttgaatatctgtctttctccccatcaaccccaatg
aacagccatgtgagagtgctctgtctactgttctccctgctcctggactgctgtggactg
gctgtggtctgtggcctgctaggagcctcccatggcatgcatactctctcctttatgggt
gcagagtgtctgttggtgacagttcgcactgggcatgttattatgaggtactccatccat
ctgtgggatctgaaccatccaggaacttgggagagcaaaggcacatatgtctactacaca
gacttcataatggagctggccatgctctttctggatcttatgcaccatatccatatgctg
ctttttggtaacatctggctgtccatggcgagcttggtcatctttatgcagttacgatat
cttttccatgaggttcagcgccgcattcgcagacacaagaactaccttcgagtcatcagc
aacatggaggccaggtttgcagttgcaactgcagaggagctggctgcaaatgatgacgat
tgtgccatctgctgggatgccatgctgacggcacgtaaactgccctgtggtcatcttttc
cataactcctgtttgcgatcgtggctcgagcaagacacatcatgtcccacatgtcgaaca
tcgctgaacattaatggcgacggggttccggggagaaaccagcagcagggcgccggtttg
gaagacaacgctggcccggtaggacccgctccagaagctcggccgcacatcaaccaacac
aatcacttcttccactttgacggttctcgtattgccagctggctgcccagtttttcagtg
gaagttatgcatactactaatattttgggcatggctcaggccaacaactcccagcttatg
ggcatggcccatcagattcaggagatgttccctcaggtgccctcctatcttgttattcag
gacctgcagctgactcgctctgttgaagtcaccacagacaacattttagaaggacgaatc
caggtgcccttccctgcacaggccatagatcgtgcccccatacagggaaacccagcagca
gatgagcagccaggtcccagtggtggagcagagcacaaccccagtgagtcggataacatg
gaggccagaggcggtcgcttctccaagtctgctgaggagaggcagaagatgctgaagctg
agaaaagaagaaatgcttcagcaagcacgcaggagatatctgcacaagggtcaagaaaat
cacgaggaggacttgcccagactgggggaggactctctcgcagagctggacttgactgtg
ctgagacggagaaccatggcagcagctgcggaaagacgtatgcaacaccaagaagaactt
gcaccctga
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