Girardinichthys multiradiatus (darkedged splitfin): 124867476
Help
Entry
124867476 CDS
T08099
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124867476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124867476
03036 Chromosome and associated proteins [BR:
gmu03036
]
124867476
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124867476
Coactivators
SAGA/TFTC/STAGA complex
124867476
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
124867476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
124867476
NCBI-ProteinID:
XP_047219890
LinkDB
All DBs
Position
4:complement(38557417..38676487)
Genome browser
AA seq
1075 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLAGQSNSAGKADESGGAGSVAPANHHLGK
TLPAPVSATTLEQQQQPGRRIKPEMHQEVNSKDDSPDKTVTSPSLGCSSSFGEAPTTPTA
GVSATSSGIQSHGASITPLTASGVSTLASPQDSISTASSRSSKVSPGTGEAPTEASAPRK
RVATPRRSPSARIKSLNGAAVTTRRSSITAVTDGIISSVDPGATPPNSTRSSTSSINTST
FTLSNANLPVGQSAIVLDRGTPTIALHRLPNHIVASIAQNGNGTSVSALVQQGTPQEPAA
ASSPTGDLSKATTDTGASKTDDCPSNIVTQSQVGSVSSVINTVSPSASCAITPATSTTAA
PTTTTTTVTQPLSSTTTAACPTAMATISVCGTVQTTSVTTTMSMVRPTAPSPTPTVATPA
QPQPRPGLATPQRIVAPQLIVRPSQQQTTIQLPPGFTIPPGMVLVRTELGQLVMVPQQAL
AQAQAQAQAQNNISPRPAAPSTGTPFRVTTPQQSPATSQTTRPCPLTPAKMTPSPSPTPS
SPALQTSSSSSSSSCPALRPKGPVAATVAVTSPQQTPVVMTPQAPAQFTSQPTQPTQTNI
AAAPGGPIVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKALVQDLLDAKIEPEE
FTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQPLQQGVKPAAGSTPPAMVA
GPAVRIRHPNSISTPAGATVLPAGTIGHAAPMGVKTGGTVSGQVRMPMVITQSIRPQGTM
GKGAIIQAGKSPMGPPAQISGNQKNKFNDPGGGSFRDDDDINDVASMAGVNLNEESARIL
ATNSELVGTQIRSCKDEAFLHPGLLHRRILETAKKFGVTEVPMEAVTFISHATQSRLRTV
LEKVSIIAQHRLDSCKDDECYEQSADVRSQLRFFEQLERIEKQRKDEQEREILLKAAKSR
SRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDSPGATPSGTEVS
GSTTGSPACASAPSTSSRQYTRQRITRVNLRDLIFYMEQERETAHSLLLYRALLK
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgcctccgaccccctggaagatatgctcttttcagaggtggatgagaaggct
gttagcgacctggtgggctcattggagtctcagttggctgggcagagcaactcagccggg
aaagcagatgaaagcggaggcgctggctctgtggcccctgctaaccatcacttaggaaaa
acgctcccagctccagtgagtgccacaacactagaacaacaacaacaaccaggacggcgg
attaaacctgagatgcaccaggaggtgaactctaaagacgatagcccagataaaactgtc
acctctccatcgctgggctgctcctcttcttttggcgaggctcccaccactccgactgcc
ggtgtgagcgccactagcagcggcattcaatcacatggagcatccatcacaccactaact
gcatctggcgtgtcaactttggcatccccgcaggacagcatcagcaccgcgtccagccgg
agctctaaggttagcccgggaacaggtgaggcgcccacagaagccagcgctccgagaaag
cgcgtcgcgacgccgagaaggagcccctcagcgcggattaagagtttgaacggcgcagcg
gtaacgacgaggaggagcagcatcactgcggtgaccgacggcatcatcagctcggtggat
cccggcgcgactcctccaaactccactcggtcgtccacctcctccatcaacacttccacg
ttcaccctgtccaacgcaaacctccccgtgggtcagtcagctattgttctggacaggggg
actcccaccattgccttgcacagacttccgaatcacatcgtagccagtatagcccagaac
ggcaacgggaccagcgtttcggcgctggtccagcagggtacccctcaagaacccgccgcc
gcatcatcccccacgggcgacctcagcaaagcgaccacggacactggagcttccaaaaca
gacgactgcccgtccaacattgtaacacaaagccaggttggtagtgtgagttctgtaata
aacaccgtatcaccgtctgcgtcctgcgctatcacgccagcaacatccactacagcagct
cctaccaccaccaccaccacagtgacccagcctctgagctctactacaacagctgcgtgt
cccacagccatggcaaccatttctgtctgtggaaccgttcagaccacatctgtgaccacc
accatgagcatggtcaggcccacagctccctctccaacacctacagtggccacccctgcc
caacctcaaccccgtccagggcttgcaacgcctcagaggatagtagccccccagctgatt
gtcagaccttcacaacagcagaccaccattcagcttccccctggctttaccatcccaccg
ggaatggtgctagtacgtactgaattgggccaattggtgatggttcctcagcaggctttg
gctcaagctcaagctcaggctcaggcccagaacaacatctccccaagacccgctgcccct
tccacggggacgcccttcagagtaacaaccccacagcagtctcctgcaacctctcagacc
acaaggccgtgtcccttgaccccagctaagatgacgccatctccctctcccacaccttcc
agccctgccctccagacctcttcctcctcttcctcctcctcttgtcctgcactccgccct
aagggccctgtggcggcgaccgtggcagtgacatctccacagcagacccccgtggtcatg
accccccaggccccagcccagtttacctcccagcctacgcaaccaacacagacgaacatc
gcagcggcccccggaggtccaatcgtgtcccaggaaatgcaagaaaatgtgaagaagtgt
aagaatttcctggccacactcatcaagctggcgtctcacaattctccatctcctgagact
tccaagaacgtcaaggccctggttcaggatctgctggatgctaagattgagccagaggag
ttcaccagcaggctgcagactgagctcaagtcgtctccgcagccttacctggtgcctttt
cttaagaagagcctcccggccctgaggctgtctttgctgaacagtcagcagtccctgacc
cagcccctgcagcagggagtcaaaccagcagctggcagcacccctcctgccatggtagct
gggccagctgtccgcatacggcaccctaacagcatcagcacccctgcgggtgccaccgtg
ctgcccgccgggaccattggacatgcagctcccatgggcgtcaagacaggagggactgtc
agtggccaggtccggatgccgatggtgatcacgcagtctatcaggccgcaaggaacgatg
ggaaagggagccatcatacaagcaggcaaaagtcccatgggcccgcctgctcagatctct
gggaatcagaaaaacaagttcaacgaccccggaggaggctctttcagagatgatgatgac
atcaatgatgtggcctcaatggctggggtgaatctgaacgaggagagcgccagaatactt
gcaaccaattctgagctggtgggaacgcagatccggtcgtgtaaagacgaggcctttctc
catccggggctgctacaccgacgaatcttggaaactgctaagaagtttggagtgacggaa
gttcccatggaagccgtgacattcatctcacacgccacacagtcacgacttcgaactgtg
ttagaaaaagtttccatcatcgcacagcatcgactcgactcctgtaaggacgacgagtgc
tacgagcagtctgcagacgttcgctcgcagcttcggttcttcgagcagctggagagaatc
gagaagcagagaaaggacgagcaggagagagagatccttctgaaagccgctaaaagtcgc
tccaggcaagaggacccagagcaagctcgactgaaacagaaagctaaggagatgcaacaa
caagagctggcccagatgagacaacgagatgcaaatctaacagcgctagctgctattgga
cctcgaaagaaacgcaaactggactcaccgggggccacaccatcagggactgaggtttcc
ggcagcacgacaggctccccagcgtgcgcctccgccccatccacctcatctcgccagtac
actcggcagcgcatcacccgcgtcaacctcagggacttaatattctacatggagcaagaa
agagagaccgcccactccctcctcctttaccgtgcactgctcaagtag
DBGET
integrated database retrieval system
