Girardinichthys multiradiatus (darkedged splitfin): 124867575
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Entry
124867575 CDS
T08099
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124867575
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gmu03310
]
124867575
Transcription factors [BR:
gmu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124867575
Nuclear receptors [BR:
gmu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
124867575
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF6361
Motif
Other DBs
NCBI-GeneID:
124867575
NCBI-ProteinID:
XP_047220049
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Position
4:complement(51372548..51482079)
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AA seq
535 aa
AA seq
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MEPSPQDSVTDAGKSRSQPAPAATETPQPAPGRTHSRSGSSASSRGKGLSAAVKKTHSSQ
IEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCQIDRTSRNRCQH
CRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQDPLRTSPSIGSPSPDEA
ESLSPQYTLCSTSLTELSDDPGCYMDRTSPDGGSLTSKAESGGADRGCEGFYLDIHPSPD
QSGLDLNGIKPEPLSDYGHSDEFFPYCSFSNGEASPTVAEHDHLAQIISKSHLETCQYLR
EELQEMSWQSLLQEEVEKYQNKPQEVMWQLCAVKITDAIQYVVEFAKRIDGFMDLCQNDQ
IVLLKAGSLEVIFVRMCRIFDSQNNSVYFDGKFASPDAFKSLGCDDLITSVFDFAKNMCS
LHLTEEEIALFSALVLFSADRSWLREKLQVERLQQKTESALQHVLQKNHRDDGVLDKLRC
KVLVLRSLCSLHSEKLSAFRAVYPDTVRKLFPPLYKELFAADLDGTLHTSNTPDM
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggagccgtccccgcaggattcggtgactgatgcgggaaagagtcgctctcagcccgct
ccagcagccacggagaccccgcagcctgcaccgggcaggacgcacagccgctccggatcc
tccgcgtccagtcgaggaaaaggcttgtcagcagctgtgaagaagactcactcttctcag
attgaaatcatcccctgtaagatctgtggagataaatcctcagggatccactatggtgtg
attacctgcgagggctgtaagggtttcttcaggcggagtcagcagagtaacgccacctac
tcatgcccccggcagaaaaactgtcagatcgaccgaacgagccgaaatcgctgccagcac
tgtcgtctgcagaaatgccttgctgtcgggatgtccagagacgctgtgaagttcggccgg
atgtctaaaaagcagcgggacagtttatacgctgaggttcagaagcaccggctccagcag
cagcaacaggatccccttcggacctcccccagcatcggcagccccagccctgatgaggca
gagtctctgtccccccagtacactctgtgctccacgagcctcacagagctttcagatgac
ccgggatgctacatggacaggacctcacctgacggaggatctttgacatccaaggcagag
tctggaggagcagacagaggatgtgagggtttctacctggatattcatccgtctccggat
cagtccggcctggatctcaatggaatcaaaccagaaccgctgagcgactacggacacagt
gacgagttcttcccatactgttccttcagcaacggcgaggcatctcccaccgtggctgaa
catgatcacttggctcaaatcatctccaagtctcacctggagacatgtcagtacctgagg
gaggagctgcaagagatgagctggcagagtctcctgcaggaagaggtggagaagtatcag
aacaagccacaggaggtgatgtggcagctttgtgcagtgaagatcacagacgccatacag
tatgtggttgagttcgcaaagcgtatcgacggcttcatggatctctgccagaacgaccag
attgtgctgctgaaagctggttctttagaggtcatctttgtacgaatgtgtcggattttt
gactcccagaacaattctgtctactttgatgggaagtttgcaagtcctgacgccttcaaa
tcattaggctgcgatgacttgatcacgtctgtgtttgacttcgctaagaacatgtgttcc
ctgcaccttacagaggaagagatcgcacttttctctgcgcttgttctgttctctgcagac
cggtcatggctgcgggagaagctgcaggtggagaggcttcagcagaagaccgagtcggct
ctgcaacatgttctgcagaagaaccacagagacgatggagtactggacaagctcaggtgt
aaggtgttggtgctgcgttctctgtgcagtctgcactcggagaagctgtcggcattcaga
gccgtttaccccgacacggtccgaaaactcttccctcctctctacaaggagctgtttgct
gccgacctggacgggactttacacaccagcaacacacctgatatgtga
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