Girardinichthys multiradiatus (darkedged splitfin): 124867586
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Entry
124867586 CDS
T08099
Symbol
lmo7b
Name
(RefSeq) LIM domain only protein 7b isoform X1
KO
K06084
F-box protein 20
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124867586 (lmo7b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124867586 (lmo7b)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124867586 (lmo7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
PDZ_6
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
124867586
NCBI-ProteinID:
XP_047220065
LinkDB
All DBs
Position
4:22841777..22883991
Genome browser
AA seq
1295 aa
AA seq
DB search
MEWRQQSSVSCEDAFTEAQRWIEEVTGKSFGCSDFRAALENGVLLCDLINQLKPGIIKRV
NRLSTPIAGLDNVNVFLKACGKLGLNESQLFHPGDLQDLSTRVTLRHDESQRRLKNVLIT
IYWLGRKAQLDTFYSGPQLNFKDFEGLLGLALSKALEEGSNAFMKDEGYKESHDSEGEES
LQTRQSYDRGNSVDGFECVNPRAVRLNEEGFGSDAEAEQVYKMDSTKVSVHQRKGHIPPP
LRRKLGREERAVGQTSQLPRVYQTQIRPGMPVQVNPGWIWSKSLSDIPMVYPVRKVSNGN
AISDKGQDTSLPRDWNQGIEREYSVVAKDSEAHWQDDLTRWKNRRRSTKSELYRRSLERE
HIVKQLTNGAVTNYEGNETPGGSLKRDQSLWRHSSSPRPYSVSSSTWLSCDLRPHTRVLL
THSNATEAPFSSESHSWESQLGPKPESGRSIMGEEPNLASDGRNGVTTPSLHQAFTSPTQ
VNALGSQCTFHSTSGQTRPQSVLPKQISPPVKLTQPEQFDTEEYARSYSSDLYMRSFNTD
PKKKTFSPNAASQSEADVTENLTNLFQKSQETPRSHLDSAEDGGAGQQESAGVSKYLSRT
TTWSSSASLPRGYRRSEGSTRLSSAITAKPFGAKSPRMSSLPRRYSDDGGHTLMLNTEDS
QSLSTKPYLKRQNAAAHLRGQYQASVRQKKANQVRQNATRQREEVNCEPSTLIQPYTKRQ
SSHNESLALPCNASADLSKVDHSDMRVSLTLSPNSIPDFGFHIHWDATGVRIKFIQPGSP
AEHCQLCVDDEVVAVNGVAVAHMTYSQWKAKMASSLQTGSLTMDIRRYGIKDWSTNKGSP
HNRPGRSMLTLNLTSAAPVLIGRSDHHANNAASVETTDTQESQLNGQTDNVTQEKAIGGL
FSGNNTNARRKDNNSVTSENKKKRAEFFTQKGGSETAISDIEVPSLNPSSSSWSWDREED
RRRQEKWQEEQELLLQEQYQRDQERLQAEWQRAQQDAIEGEMPREDAVEMACGRQRFASS
QLYVNELTKETKQKLKLDKEDQRDAEPKPPNIAHEAQNDRIPGKDWAEGSHGFAQLSHAH
RAMSMSTPTLSGPYKQTRGDPRKRRGLTVSKAERERQQILEEMKKRTQLLTDNSWIRQRS
DSFHKEPIDVGTSMKRYESLDNLDILHQYSDSAAAFIYPRPHSAAGLYSTQSRNASSRYS
TGSMSLQTHMNSESSHYARMVSGRRTCCVCERVLGSGAAMVIDALSLCFHLTCFQCVGCH
RHLGGTETGVQVRVRNRRPYCDYCHFQFNSTAFHV
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgccagcagagcagcgtcagctgtgaagacgccttcaccgaagctcagcgc
tggattgaggaagtgactggaaaatcctttggctgcagtgactttcgtgctgccctggaa
aacggggttttgctttgcgacttaatcaaccagttgaaacctggaatcatcaaacgagtg
aacaggctttccactcccattgctggcctggataatgtgaatgttttcctgaaagcatgt
ggaaaacttggactaaatgagtcacagctgtttcatcctggcgaccttcaggatctgtcc
actcgggtgacactcaggcatgatgaaagtcagagaagactcaaaaatgtccttattaca
atatactggctgggtcgcaaggctcaacttgacacattctacagtggtcctcagcttaat
ttcaaggatttcgaggggcttttagggttggccttgtccaaggctctagaagaaggcagc
aatgcatttatgaaagatgagggttacaaggagagccatgactcggagggagaggaaagt
ctgcaaacaagacagagttatgatagaggaaattcagtggatggctttgagtgtgtgaac
cccagagctgtccgtctaaatgaagaaggttttggaagtgacgcagaagcagagcaggtg
tacaagatggacagtacaaaagtctcagtccaccagagaaaaggacatattccaccaccg
cttcgtagaaaactaggacgggaggagagggcagtgggccaaacgagccaactcccaaga
gtatatcaaacccaaatcaggcctgggatgccagttcaggtcaaccctggctggatttgg
agcaaatccctcagtgacatccctatggtgtatcctgtgcgtaaagtttcaaatggaaat
gccatttctgataaaggtcaagacaccagcctgccgagggactggaatcaaggaattgaa
agagagtatagtgtagttgccaaggacagcgaagctcactggcaagatgacttgacgaga
tggaaaaatcgacgcagaagcaccaagtctgaactgtacagacggtcacttgaaagggaa
catattgtcaaacagctgaccaatggggctgtgacaaattatgagggtaatgagacacca
ggagggtccctaaagagagaccagtcactgtggcgacatagctcctctccccgtccttac
tctgtttcttcatccacatggctaagctgtgatctcagaccacatactcgagttctcctg
acccacagcaatgccactgaagcccctttcagctccgaaagccattcttgggagtctcaa
ttgggacccaagcctgagtctggtaggtctatcatgggagaggagccaaacttggcttca
gatggaagaaatggagttactacaccttctctacaccaagctttcacctccccgacgcaa
gtgaatgccctgggtagccagtgtacttttcattccacatctggacagacgcgaccacaa
agtgttttgccaaaacagatctcccctcctgttaaactcacacaaccagaacaattcgat
actgaagaatatgctaggagctatagttctgatttgtacatgcgttccttcaacactgat
ccgaaaaagaaaactttttctccaaatgcagctagtcagtcagaagctgatgtaacagag
aatttgacaaatctgttccaaaaatctcaagaaactccaagatcacatctggattcagct
gaggatggaggtgccggtcagcaggagtctgcaggggtctcaaagtatttgtccagaact
acaacatggtccagctctgcaagccttcctcgcgggtaccgtcggtctgagggttccact
cgtctttcttctgcaatcacagccaaacccttcggtgcaaagtcacccagaatgtcctcc
ctgccaagacgatacagtgatgatggcggtcatactttgatgttgaacactgaggattca
caatctttatccaccaaaccatatcttaaaagacaaaatgcggcggctcatctgaggggt
cagtatcaggcctcagttcggcagaagaaggccaaccaggtgaggcagaatgctacaaga
cagagggaggaagtgaactgtgagccctccaccctgattcaaccttatacaaaacggcag
tcttcccacaacgaaagcttggctcttccatgtaatgcaagtgctgacctctcaaaggtt
gatcacagtgacatgagagtgagcctgactcttagtccaaacagcataccagactttggg
ttccacattcactgggacgccacaggggtgagaataaaattcattcaaccaggcagtcca
gcagagcactgtcagctgtgtgtagatgatgaggttgtggcagtcaatggagttgcagtt
gcacacatgacctacagccagtggaaggcaaaaatggcatcctcgctgcaaactgggagt
ctaaccatggacattcgtcgttatggcatcaaggattggagcacgaataaaggaagtcct
cacaatcggccagggcggagcatgttgaccctcaatttgacttctgctgcacctgtttta
ataggtcgctctgatcaccatgccaacaatgcagcctctgtagaaacaacagacactcaa
gaatcccaacttaatgggcagacagacaatgtaacccaagagaaggccattggtgggctc
ttttctggcaataacaccaatgccaggcgtaaagataataatagtgtaactagcgaaaat
aagaaaaagagggcagagtttttcacccagaaaggaggctcagaaactgcaatatctgat
attgaggtgccctccctcaacccatcctcatccagctggtcttgggaccgtgaggaggat
cgcaggcgtcaggagaagtggcaggaagagcaagagctcctcctgcaggaacaataccag
cgagatcaagagaggttgcaggcagagtggcaaagggcacagcaggatgcaatagaagga
gagatgccgagggaagacgccgttgagatggcttgtggtcgtcagaggtttgccagttca
cagctttatgtgaatgaattgacaaaggaaacaaaacagaagctaaaacttgacaaagaa
gatcagagagatgcagaaccaaaaccacccaatattgcacacgaagcgcagaatgacagg
attcctggaaaagattgggctgagggttcccatggtttcgctcagctgtcccatgcacac
agggcaatgtccatgtctactccaactttatctggaccctacaaacaaacgagaggtgac
ccaaggaaaagaagagggctgactgtatcaaaggctgagagagagagacagcagattttg
gaggagatgaagaaaaggactcagcttctgactgacaacagctggatacgtcagcgcagc
gatagttttcacaaggagccaatcgatgttggtacctccatgaagagatatgagtctttg
gacaacctggatattttgcatcagtattcagactctgctgcagcatttatttaccctcgc
ccccattcagctgctggactttacagcactcagagtaggaatgcctcctcacgctacagt
actggatctatgtcattacagacacatatgaactcagagtcatctcattatgccaggatg
gtcagtggcaggaggacttgctgtgtgtgtgagcgtgtcctgggtagtggggcagccatg
gtcatagatgcccttagtctctgtttccacctaacctgtttccagtgcgtgggctgccat
cgacaccttggaggaacagagactggagtccaggttcgcgttcgaaacaggaggccttac
tgtgactactgccatttccaattcaattccactgccttccacgtgtga
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