Girardinichthys multiradiatus (darkedged splitfin): 124867750
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Entry
124867750 CDS
T08099
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124867750 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124867750 (taf5l)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124867750 (taf5l)
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124867750 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
124867750 (taf5l)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124867750 (taf5l)
STAGA complex
124867750 (taf5l)
TFTC complex
124867750 (taf5l)
SAGA complex
124867750 (taf5l)
SLIK complex
124867750 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
TFIID_NTD2
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_DCAF4
RMC1_N
PROPPIN
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD_LRWD1
WD40_like
DUF7165
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Beta-prop_ELP1_1st
Lysis_col
Motif
Other DBs
NCBI-GeneID:
124867750
NCBI-ProteinID:
XP_047220285
LinkDB
All DBs
Position
5:complement(4237265..4242408)
Genome browser
AA seq
601 aa
AA seq
DB search
MKRVRAEQIQYAVAQYLKRRQYVDTDGSLKGGKLFQSTEELAASLTVQTESGCANVVSAA
PCQSDPQQYEIQFSRLHSFLAETEISYAQEVSSLLYPLFVYLHIDMVHCGLKGAVDSFYV
RFHDVFLNDGEQRSVIEQLRHIVTAQDVAANPKLRSFLEHKYVLHLTEPAHSYLLRYLQS
EDNSALCRVLSAHLQVEVTTSRRTEYQLYGTAGGFMAATNSISTSWVGVGGAEGGEGVEV
PAGIPQNEVALLALQDCIKKVREGPPSLTTICFYAFHHTEHMLNTAEVSPDSRLLAAGFD
SSAVKLWSLRARKLKAKPHQADVSCIHLACDVQEEEVDEEDGCGSEIKMLRGHSGPVYRT
AFLTDSSGLLSCSEDTTIRYWDLGSFTNTVLYQGHTYPVWDVDVSPCSLYFASSSHDRTA
RLWTFSRTYPLRHYVGHLSDVDCVKFHPNSNYLATGSTDKTIRLWSTQQGQSVRLFTGHR
GTVLSLAFSPNGKYLASAGEDQRVKLWDLAAGTLFKDLRGHTDSITSLSFSPDSSLVVSS
SIDNSVRVWDIRNSHGGTPADGSSSELVGLYVGNTSNVLNVQFMACNLLLVTGTALEKAE
V
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgggttcgcgctgagcagatccagtatgcagtggctcagtatctgaagaggagg
cagtatgtggatactgacggctccttgaaggggggtaagctcttccagtccacagaggag
ttggctgccagcctgactgtgcagacagagtcaggctgtgccaacgtcgtctctgctgct
ccctgccagtctgacccacaacagtatgagatacaattctcaaggctgcactcctttctc
gcagaaacagaaatctcctatgcacaagaggttagcagcctcctctatcccctatttgtt
tatcttcacattgacatggtacactgtggcctgaagggggcagtggatagtttttacgtt
cgttttcatgatgtctttcttaatgacggagagcagcgatcggtcatagagcagctccgt
cacattgtcactgcacaggatgtcgcagccaaccccaagctaagatcttttctggagcac
aagtacgtgcttcatttgacagagccagctcacagttacctgctgcggtacctgcagagt
gaggacaacagcgccctctgcagggtcctcagcgcacatctccaggtggaggtcacaact
tcaagacgtacagagtaccagctgtacggaactgctggtggtttcatggcggccacaaac
tctatttccacctcctgggtgggtgtgggtggagcagaaggtggagagggggtggaggtc
cctgcggggatcccacagaatgaggtggcgcttctcgcattgcaggactgcattaagaaa
gtccgtgaaggcccaccctcactcacaaccatctgcttttatgccttccaccacacggag
catatgcttaacaccgccgaggtttccccagacagtcgcctgttggctgctggattcgac
agctctgcagtgaagctctggagcctccgagcccgaaagctgaaggccaaaccgcatcag
gccgacgtgtcgtgcatccacctggcatgtgatgtccaagaggaggaggtagatgaagag
gatggctgcggcagtgagataaaaatgctgcgaggtcacagcggccctgtgtatcgtact
gccttcctaacggacagctcaggcctgctctcttgctctgaggacacaactattcgatac
tgggaccttggcagcttcaccaacacggtgctctaccagggccacacctacccagtatgg
gatgtggacgtcagcccctgcagcctctattttgccagcagctcccacgaccgcaccgcc
cgcctttggacattctcccgcacctatccgctgcggcactatgtggggcacctctctgac
gtcgactgtgtcaagttccacccgaactccaactacctggctaccggttccacagacaag
actattcgcctgtggagcacccagcaggggcagtcggttcgcctcttcactggccaccgt
ggcaccgtgctgtcactggccttctcacctaatgggaagtacctggcttctgcgggagag
gaccagcgggtgaagttgtgggacttggcagcagggactttgttcaaagatctgcgtggc
catacagacagcatcaccagcctgtccttcagcccagacagcagcctggtggtgtcgtca
tctatagacaactctgtcagagtgtgggacattcgcaactcccacggtggaacgcctgct
gacggctcgtccagcgagttggtgggcctgtatgttggaaacaccagcaatgttcttaat
gttcagttcatggcctgcaacctgctgctggtcacaggaacagccctggagaaagctgaa
gtgtag
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integrated database retrieval system
