Girardinichthys multiradiatus (darkedged splitfin): 124868079
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Entry
124868079 CDS
T08099
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04144
Endocytosis
gmu04517
IgSF CAM signaling
gmu04519
Cadherin signaling
gmu04530
Tight junction
gmu04810
Regulation of actin cytoskeleton
gmu05100
Bacterial invasion of epithelial cells
gmu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124868079 (arpc1a)
04519 Cadherin signaling
124868079 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124868079 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
124868079 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124868079 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124868079 (arpc1a)
05100 Bacterial invasion of epithelial cells
124868079 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124868079 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmu04812
]
124868079 (arpc1a)
Membrane trafficking [BR:
gmu04131
]
Others
Actin-binding proteins
Arp2/3 complex
124868079 (arpc1a)
Cytoskeleton proteins [BR:
gmu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
124868079 (arpc1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR75_1st
EIF3I
Beta-prop_HPS5
Rax2
RMC1_N
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
124868079
NCBI-ProteinID:
XP_047220840
LinkDB
All DBs
Position
5:41301635..41309727
Genome browser
AA seq
387 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKTHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKEGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSASGNRLAWVSHDSTVTVVDSSKTASPS
QLKTEFLPLLSVIFVSENSLVAAGHDCCPMLFRCDDGGALTFVSKLDLPKQSIQRNMSAM
ERFRNMDKRATTEDRNTTLDTLHQNSITQVSIYEGDKRDCRRFCTTGIDGAMTIWDFKSL
EASIQVLSPPLLSFSPSTCVPQPAKST
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcatcagtttctgttggaacccatcacctgccacgcgtggaaccgcgacagg
acacaaattgccattagtccgaacaaccatgaagttcatatctacaagaaaagtggcaac
cagtgggtgaagacccatgagctgaaggagcacaacggacacattacaggtattgattgg
gctcccaaaagtgatcgtatagtgacatgtggggccgatcgtaacgcctacgtgtggtct
cagaaggaaggagtttggaaacccacactggtcatcctcaggatcaaccgggcagccacc
ttcgtcaagtggtctccgctggagaacaagtttgcagttggcagtggagctcgactcatc
tctgtctgttactttgagtctgagaatgactggtgggtgagcaaacacataaagaaacca
atccgctccaccatcctcagtctagattggcatcccaacaatgtcctcctggctgctggc
tcatgtgacttcaaatgcagggtgttctcagcctacattaaggaggtagaagaaaaacca
ggccccactccttggggcagcaaaatgccattcggggccgtgctagcagaatttggggga
gcgggtggagggggatgggtccactccgtctctttttcagcctccgggaaccgtctggct
tgggtcagccatgacagcactgtcactgtggtagacagctctaagactgccagtccctca
cagctgaagacagagttcctgcctcttctcagcgtcatttttgtttcagagaacagtcta
gtagccgcgggccacgactgttgcccaatgctcttccgttgcgacgatggcggagcgctg
acatttgtgtcgaagctggacctccccaaacagagcatccagaggaacatgtccgccatg
gaacgcttcaggaacatggacaagagagccaccaccgaggaccgcaacacaaccctggac
acactgcaccagaacagcatcacccaagtgtctatctatgagggagacaaaagggattgt
cgcaggttctgcaccacgggcattgatggagcaatgaccatttgggactttaagagtcta
gaagcttctatccaagtcctcagccctcctcttctctctttcagcccctccacttgtgtg
ccgcagccagcaaaaagtacataa
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