Girardinichthys multiradiatus (darkedged splitfin): 124868083
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Entry
124868083 CDS
T08099
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124868083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124868083
03036 Chromosome and associated proteins [BR:
gmu03036
]
124868083
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124868083
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
124868083
Chromatin remodeling factors
BAF complex
124868083
PBAF complex
124868083
GBAF(ncBAF) complex
124868083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
QLQ
BRK
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
124868083
NCBI-ProteinID:
XP_047220847
LinkDB
All DBs
Position
5:10478203..10508527
Genome browser
AA seq
1656 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGPSPGSSHSMMGPSPGPPSSGHSQPGPSGYGPDNMH
PLHKPMEGMHEKSLCDDGRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHSPLGGSDHS
SPVASTGPPSGPLMPSTSSSSSSAGSASASLDGSSVDQHSLGPNNRPGPPGNSGPGPSPG
PSLGSSVPSLGSGLDGSGPGGPGGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAV
QGKRPMPGMQQQPISSLVSGAVGGPGGGPTGPGSGPGPMGSSYSRPHGMMGPNMPPPGPS
GTPVGMQGPNPNGPSKSWPEGPMVNAAAPSNAPQKLIPPQPTGRPSPAPPSVPPAASPVM
PPQTQSPGQPAQPPPMMPYHAKQNRITPIQKPCGLDPVEILQEREYRLQARIAHRIAELE
NLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALDAKAYKRSKRQS
LREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVAT
YHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTE
LVRAHKAAQALKEKKKKKKKKKKLENAEGQTPALGPDGEPLDETSQMSDLPVKLIHVDSG
NILTGVDAPKAGQLETWLEMNPGYEVAPRSDSEDSEEEEEEEEEEEDPQPSAAPVEDKKK
ITDPDSEDVSEVDVRHIIENAKQDVDDEYSGAAFARGLQSYYSVAHAVTEKVDKQSTLLI
NGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV
PLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKQVL
AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLP
TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE
KVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPY
MFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKLRATSHKVLLFCQMTSLMT
IMEDYFAYRSFKYLRLDGTTKAEDRGMLLKTFNDPGSEYFIFLLSTRAGGLGLNLQSADT
VIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ
AGMFDQKSSSHERRAFLQAILEHEDQDEVWGQEIVNEEDEVPDDETVNQMIARSEEEFEQ
FMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKDDAEVERLTCEEEEEKMFGRGSRQRK
EVDYSDSLTEKQWLKVAIEEGTLEEMEEEVRHKKTTRKRKRDRDLDLPGPSSSSGSRGRG
DRDDDGKRQRRRGRPPAEKLSPNPPGLTKKMRKIVDAVIKYKDSTSGRQLSEVFIQLPSR
KELPEYYELIRKPVDFRKIKERIRSHRYRSLGDLERDVMLLFQNAQTFNLEGSLIYEDSI
VLQSVFTSLRQKIEKEEESEGEESEEEEEEQEDGSESESRSVKVKIRLSRKDKGGDRGKG
RSRRTGRTRAKPVVSDDDSEDEQEEERSASGTDEEA
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacacctgatcctcccatggggggtaccccccgtcctggtccctcccccggccct
ggccccagcccaggtccttcccctggctcctctcacagcatgatggggcccagtccgggt
cctccttcctctggacactcccaaccagggccatccggatacggaccggacaacatgcac
cctctgcacaaacctatggagggcatgcatgagaagagcttgtgtgatgacggtcgcttc
agtcagatgaaggggctttcgatgagacagggcgggcacagcggtatgggccccccaccc
agccctctggatcaacactcacaaggctaccactctccactaggtggctctgaccactcc
agccctgtcgcttcaactggccctccatctggtcctctaatgccatcaacctcctcctca
tcctcttctgctggttctgcctcagcctctctagatggctccagtgtagatcaacattcc
ttggggcctaataaccggcctggacctccggggaattcaggacctggccccagccccggg
cctagccttggctccagcgtgcccagtcttggttctggccttgatggtagtggtcctgga
ggtcctggtggcccaactccctttaaccaaaatcagcttcaccagctcagagcccagatc
atggcatataagatgttagcccggggacaaccccttccggatcatctccaaatggctgtc
caaggaaagaggccaatgccagggatgcagcagcagcccatttccagtctggtctctgga
gccgttggagggccaggaggtggtccaacaggacccggatcaggacctgggccaatgggc
tcaagctacagccggcctcatggcatgatgggtcccaacatgcctccccctggtccttca
gggaccccagttgggatgcaaggaccaaatcccaatggaccctccaagtcatggcctgaa
ggccctatggtgaatgcagcagccccctctaacgcaccccaaaaactcatcccccctcag
cccaccggtagaccttctcccgctcccccatcagttccccccgctgcttcccctgtaatg
cccccgcagacccagtcccctggtcagccagctcagcctcctcccatgatgccttaccat
gccaagcagaaccgcattacccccatccagaaaccctgtggcctcgaccccgtggagata
ctgcaggaaagggagtacaggttacaggctcgtattgctcatcgcattgctgaattggag
aacctgcccggttccttggctggtgatttacgtaccaaagctacaatagagctcaaagct
cttcgtttgctgaacttccagagacagctgcgtcaagaggtggtggtgtgtatgcgacgt
gacacggctctcgaaaccgccctggatgccaaggcctacaagcggagcaaacgtcagtct
ctgcgagaggcccgcatcacagagaaactggagaaacagcagaagattgagcaagagcgc
aaacggagacaaaaacatcaggagtacctcaacagcattctccagcatgccaaagacttc
aaggagtatcaccgctcagtcacgggaaagattcagaagctgaccaaagccgtcgccacc
taccacgccaacactgagcgggagcaaaagaaggagaatgaacgaattgagaaagaaaga
atgaggcggcttatggccgaggatgaagagggttaccgtaaactgattgaccagaagaag
gataaacgcctggcctatttactacagcaaactgacgagtatgttgccaacctcactgag
ctggtacgagcccacaaagctgcacaggccctcaaggagaaaaaaaagaagaagaaaaaa
aagaagaagttggagaacgcagagggtcagactcctgctcttgggcctgatggagagccc
ctggatgagacgagccagatgagtgacctgcctgtaaagctaatccatgtggacagtggt
aatatcctgaccggtgtggatgctcccaaggctggacagctggaaacttggctggagatg
aaccctggttacgaggttgctccccgctcagacagtgaagacagtgaagaggaggaagag
gaggaggaggaagaagaagatcctcagccttcagcagctccggtggaggataagaagaag
attacagaccctgacagtgaagacgtgtcagaggtggatgtccgacatatcattgagaat
gctaaacaggatgtggacgacgagtacagtggtgcagcgtttgctcgaggacttcagtcg
tattactctgtggcccacgccgtcacagagaaggtggataaacagtctactttattgata
aatggacagcttaaacagtatcagattaaaggtctggaatggctagtttctctttacaat
aacaatctgaatgggatcctggctgatgagatgggtctgggaaaaaccatccagacgatt
gccctcatcacctacctcatggagcacaagcggctcaacggaccctacctcatcattgta
cccctctcaactttgtctaactgggtgtacgagtttgacaagtgggcaccatcggtcgtt
aaagtgtcgtacaaagggtctcctgctgctagaagagcctttgtcccccagttgcgtagc
ggcaagtttaatgttttactcaccacttacgagtacatcatcaaggacaaacaagtactg
gccaagatccgttggaaatacatgattgtggacgaaggccaccgtatgaagaaccaccac
tgtaagctgacccaggttctgaacacccattaccttgctccaaggcgagtgttgctgacc
gggactccactgcagaacaaactacctgaactgtgggcgctcctcaacttccttctgccc
accattttcaagagctgcagcacgtttgagcagtggttcaatgccccatttgcaatgact
ggagagaaggtggatcttaatgaagaggaaaccatcttgattattcgtcgcctgcacaaa
gtgctgcgccccttcctgttacgaagattaaagaaggaagtggaggctcagcttccagag
aaggtggaatatgtcatcaagtgtgatatgtcggctcttcagagggtcctgtacaggcac
atgcaggccaagggggtcctactcactgatggatcagagaaagacaagaagggaaaggga
ggcacaaagactctgatgaacaccatcatgcagctgaggaagatctgcaaccatccgtat
atgttccagcaaatagaggaatctttctctgaacacttaggattctctggtggaatagtc
cagggtcctgacctttatcgagcttcaggaaagtttgaggtgctggatcggatcctgcca
aagctgagggccacaagccacaaagtgctgctcttctgtcagatgacctcactgatgacc
atcatggaggactactttgcctaccgtagcttcaagtacctgcgtttggatggcactaca
aaggctgaagacagaggaatgttactgaagacatttaatgacccagggtcagagtacttt
atctttctcctgagcacaagagctggaggtctcggcctcaacctgcagtctgcagacact
gtgattatttttgacagtgactggaacccacatcaggacttgcaggctcaggacagagcc
caccgcattgggcagcagaacgaggtacgagtgctacgcctttgtaccgtcaacagcgta
gaagagaaaatcctggcagcggccaagtacaaattaaatgtggatcagaaggtcatccag
gctggcatgtttgatcagaagtcttccagccatgagcgccgggccttcctgcaggccatc
ctggaacatgaggaccaagacgaggtctggggtcaagagatcgtgaatgaggaggacgag
gtgccagacgatgagaccgtcaaccaaatgattgccaggagtgaagaggagtttgagcag
tttatgcgcatggacctggacaggcgtcgtgaggaggcccgtaatcctcggcgaaagcct
cgtctgatggaggaagatgagcttcccacctggattatgaaggatgatgctgaagttgag
cgtctgacctgtgaggaagaggaggaaaaaatgttcgggcgaggttctcgacagcgtaag
gaagtggactacagcgattcactgacagagaaacagtggctcaaggtggcaatagaggaa
ggcacactcgaagagatggaggaggaagtacgtcataaaaagacaacccgaaagaggaag
agggaccgtgatctggatctccctggtccctcgtcttcctccgggagccgcggacggggg
gacagggatgatgatgggaagaggcaaaggaggaggggcagaccccctgctgagaaactc
tcccccaatcctcctggtctgacaaagaagatgaggaaaattgtggatgctgtcatcaaa
tataaagacagcaccagcgggcgtcagctgagcgaggtcttcattcagctgccatctcga
aaggagctgcctgagtactacgagctaatccgcaagccagtggacttcaggaagatcaag
gagaggattcgaagtcatcgctaccgcagtctgggtgacctggagagagacgtcatgctg
ctcttccaaaatgctcagaccttcaatctggagggttccctgatatatgaagactccatc
gtgctgcagtcagtgttcaccagcttgaggcagaagatcgagaaagaggaggaaagcgaa
ggagaggagagtgaggaagaggaggaagagcaggaggatggatcagaatcagaatcacgc
tcagtcaaagtaaaaatccgcctgagtcggaaggataaaggcggagatcgaggaaaaggg
cgcagcaggcgaacaggacgcaccagggccaaacctgttgtcagtgatgacgactctgag
gatgagcaggaggaggagcgctcagccagtggcactgatgaagaggcttga
DBGET
integrated database retrieval system
