Girardinichthys multiradiatus (darkedged splitfin): 124868111
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Entry
124868111 CDS
T08099
Symbol
toporsa
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124868111 (toporsa)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124868111 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmu03037
]
124868111 (toporsa)
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124868111 (toporsa)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124868111 (toporsa)
UBL E3 ligases
124868111 (toporsa)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
124868111 (toporsa)
Cilium and associated proteins [BR:
gmu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124868111 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
zf-ANAPC11
DR2241
zf-RING_6
Baculo_IE-1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
124868111
NCBI-ProteinID:
XP_047220893
LinkDB
All DBs
Position
5:19717723..19721784
Genome browser
AA seq
779 aa
AA seq
DB search
MSAIKVALQHSPKGGRSKTSKAMSVEVSPDSKCPICLDIFHNMSHLDRCLHKFCFRCILE
WSKNKPECPLCKQPFSSIYHSIKSDQDFQKYELKQQVDNSSFGYFEGVRFRYRTTLTGVH
RQMRRTSPPPDNGVMFEASTDLPQQRQDRYIRRMIMRLAAKRRAASEGRAVNNVREQEMI
NFRRELYRQGVRVQNVRDGGRSRDTSAEFYRRNPACLHRLVPWLKRELMVLYGAHGSLVN
IVQHIIMSRITRYDMEDGAIQEELRPFLQGRTEHFLHEFINFAKSPFNMEAYDQHAVYDC
PASFSNEHSSSNSSVITISEDEENSSEMEPPGNSTSTLSQSLWDDETPGPSYSTTTEPSR
PGLQSILDLDSESNSEEEQLEFGTSPQQIRSHSPADVAYAECTNEDCASSESDDCVIVGF
VKPTTDRTPELVHLSSDSDDFSIEENKEAPLQSQHIRFISCSPTASHSSHSSKAGGTKNV
QTDHHHQSSSKERPNSNKYKNSPGRRTDKRFDNRDRSVDRHKSKGRDGKRKKSKHSSRSP
VSFSSHSSRRDFSKYDQIHARRDRDHSYQSYTHYRRERNGSVTHYTQRQSHYYSSRKHSK
SRSRSRDSSQRRDKRWSRSRTYSSSCFPSPERKSHHDKPGGKRKYKARHLEEQSKNTQNL
SAESDSTSLRKHKKKSKEKRHKKSKERTRKRSRSGSTELGTERLKHHHKKKKHKKKSKKS
KSTESKAKSSPNVISIESDESFANHSVTPVSRTTESTFNDCSADDRVNTAPVDQTSQSH
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaatcaaggtcgccctgcaacacagcccaaagggtgggaggagtaaaacctct
aaggcaatgtctgtagaggtgtctccagactccaagtgccccatctgtttggacatattt
cataatatgtctcacttggaccgttgcctgcataagttctgcttccgctgtattctggag
tggtcaaagaacaaacccgagtgtccactgtgtaaacagccatttagctcaatctatcat
agcataaagtcagatcaggactttcagaagtacgaactgaaacagcaggtggacaattcc
tcctttggttatttcgagggagtgcggtttagatatcgaacgactctcactggagttcat
cgacagatgagaagaacctctccacctccagacaacggggtaatgttcgaagcctccaca
gatttaccccagcaaagacaggatcgatacattcggcgcatgataatgaggttggcggct
aaaaggagagctgcgagcgaaggcagggcagtgaacaatgtcagggagcaggagatgata
aactttaggagggagctgtaccgacagggggtgagggtgcagaacgtgagggacggtggg
cgctcccgggacacctccgccgaattttatagaagaaatcccgcctgcctgcacagactc
gtcccatggttaaaaagagaactgatggtgctgtatggggcccacggatctttggtcaac
atagttcagcatattatcatgtcacgcatcacacgctacgatatggaggacggggctatc
caggaagaactcagacccttcctacagggtcggacagagcactttctgcacgaatttatc
aatttcgcaaagtcccccttcaatatggaggcctacgaccaacatgctgtttatgactgc
ccagcatccttctcaaatgagcacagcagctccaactcctctgtaatcaccatctcagag
gatgaggaaaactcttcagagatggaacctccggggaactccacgtctactctgagtcag
tctttgtgggacgacgagacgcctgggccgtcatattctacaacgacagagcccagcagg
ccaggacttcagtcaatcctggacttagactcagagagcaactcagaagaggaacagcta
gagtttggtacttctccacaacagattagatcacatagcccagcagatgttgcttatgct
gagtgcaccaatgaagactgtgcctcttctgagagtgatgactgtgttattgtaggattt
gttaagcctacaacagatagaactccagagctggttcatctctcttctgactctgatgac
ttttccattgaggagaacaaagaagctcctcttcaatcgcaacacatccgtttcatcagc
tgtagtcctacagcttcacacagtagtcattctagtaaggctggaggaactaaaaatgtc
caaacagaccaccatcatcagtcgtcctctaaagaaagaccaaactcaaacaaatacaaa
aactcacctggtagaagaactgataaacgatttgataatagagatagatctgtggataga
cataagtcaaaggggagagacggcaagagaaagaagagcaagcactctagcagaagtcct
gtaagtttcagctctcattccagtagaagagacttctcaaaatatgatcaaattcacgca
aggagggaccgcgaccacagttaccagtcatacacccattacagacgagagaggaacggc
agcgtgactcactacacacagaggcagtcccactactacagcagccgcaagcactctaaa
tccaggagccgcagcagggactcgtctcagaggcgagacaagaggtggtccagatccaga
acttactccagcagctgcttcccttcgcctgaaaggaagtctcatcacgacaaacctggt
ggcaaaaggaaatacaaagcaagacatctggaggaacaatccaagaacacccaaaacctg
tccgccgaaagcgactccacgtcgttaaggaaacacaagaagaaaagcaaagagaagcgc
cataaaaaatccaaagagaggacaaggaagagaagcaggagtgggagtacagagcttggc
actgagcgactcaaacatcaccataagaagaagaaacacaagaagaaaagtaaaaaaagc
aagagtactgagagcaaagcaaagtcctcaccgaatgtaatctccattgaaagtgacgag
tcttttgccaatcacagtgtcacccccgtcagtagaactactgaaagtaccttcaatgat
tgttctgctgatgaccgagtaaacaccgcgcctgtggaccagacttcacaatcacattga
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