Girardinichthys multiradiatus (darkedged splitfin): 124868128
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Entry
124868128 CDS
T08099
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03030
DNA replication
gmu03410
Base excision repair
gmu03420
Nucleotide excision repair
gmu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124868128 (rfc2)
03410 Base excision repair
124868128 (rfc2)
03420 Nucleotide excision repair
124868128 (rfc2)
03430 Mismatch repair
124868128 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmu03032
]
124868128 (rfc2)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124868128 (rfc2)
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124868128 (rfc2)
DNA replication proteins [BR:
gmu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124868128 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
124868128 (rfc2)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124868128 (rfc2)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124868128 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
124868128 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
Mg_chelatase
AAA_24
Viral_helicase1
AAA_11
Rad17
RuvB_N
MipZ
AAA_assoc_2
AAA_19
DEAD
nSTAND3
AAA_5
AAA_30
AAA_18
AAA_28
DNAX_ATPase_lid
ABC_tran
MeaB
RNA_helicase
NTPase_1
AAA_25
SLFN-g3_helicase
MCM
AAA_2
AAA_23
FtsK_SpoIIIE
DUF815
bpMoxR
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
124868128
NCBI-ProteinID:
XP_047220919
LinkDB
All DBs
Position
1:47104470..47108860
Genome browser
AA seq
357 aa
AA seq
DB search
MDAEMADTESGQKPSGSGVKTDTHVGESSSKSSGSSYELPWVEKYRPLKLSEIVGNEETV
SRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGAAMKEAVLELNASNDRGIDVVR
NKIKMFAQQKVTLPKGRHKVIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKI
IEPIQSRCAVLRYSKLTDGQILARLQEVVEKERLSVSDDGLEAVIFTAQGDMRQALNNLQ
STNAGFGYINSDNVFKVCDEPHPLLVKSMLGHCVDGDIDSAYKVVEQLWALGYSPEDIIG
NIFRVCKTYQMAEYLKLEFIKEIGFTHMRVAEGVNSLLQMAGLLGRLCSKTAPPAAS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagaaatggcagacacagaaagcggccagaaaccgagtggaagtggggtaaag
acggacacccacgtcggggagtcctcgtcgaaaagctccgggagctcttacgagcttccc
tgggtggagaaatatcgcccgctgaagctgagtgagatcgtagggaacgaggagacggtg
agccgtctggaggtgttcgccagggagggaaacgtcccgaacatcatcatcgcaggtcct
ccgggcacaggaaagaccaccagcatcttgtgtttggcccgagctctgctgggagctgcg
atgaaagaggccgtgttggagctgaatgcctcaaacgacagggggatcgacgtggtgagg
aacaagatcaagatgtttgctcagcagaaagtcacgctgcccaaaggtcgacacaaggtc
atcatcctggacgaagcggacagcatgacagatggagctcagcaggcactgaggaggata
atggagatctactccaagacaacacgcttcgctctcgcttgcaacgcctccgacaagatt
atcgagccgatccagtctcgctgcgctgtgctgcggtactcaaaactgacggacggacag
atcctggcccggctgcaggaggtggtggagaaggagcgcctgtccgtgtctgatgacggg
ctggaggcagtcatctttacggcacagggcgatatgagacaggcgctaaacaacttgcag
tccaccaacgctggcttcgggtacatcaacagcgataacgtgtttaaggtgtgcgatgag
ccccaccccctactggtgaaaagcatgctgggacattgtgtggacggggacatcgactcg
gcctacaaagtggtagagcagctgtgggcgctgggctactctccagaggacattatcggg
aacatcttcagggtctgcaagacctaccagatggcagagtacctcaaactggagttcatc
aaggagatcggcttcactcacatgcgggtggctgaaggtgtgaactcactgctgcagatg
gctggtctgctgggacgactgtgcagtaagacggcgccccctgctgccagctga
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