Girardinichthys multiradiatus (darkedged splitfin): 124868167
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Entry
124868167 CDS
T08099
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu02010
ABC transporters
gmu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124868167
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124868167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmu02000
]
124868167
Transporters [BR:
gmu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
124868167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
124868167
NCBI-ProteinID:
XP_047220987
LinkDB
All DBs
Position
5:complement(33724285..33761575)
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AA seq
2272 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRIHYPPHEQHECHFPNKA
MPSAGTLPWVQGIVCNANNPCFRNPTPGESPGIVGNFNDSIISRLFNDAKKMLLYTQSDK
SYEGYLGMLKALRKLQTNPARFKLKDFLKDDETLSHFLHHNASLSHHTLKQILEADVNLE
KVLTKGFGFHLRDLCNSTPLEEFVHIADRNVSHLTQEIICKSSSDWLNKAQNHFLSNLDF
LKPIRKDARSDPKAIQEVSAATNNLLESLGALGVELASMKSWKDMRKEILYLTANSTGSP
KLVYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGHHGNDSDSEPMSTYDNSSTPYC
NNLMRNLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGM
WEEMKPKFWSFMENSEEMDLVRSLLQSNTSSAFLNAQLSETEWRVSDVAHFLTKASEDRR
PAGSAYTWRDVFNETDQAIKAISQFMECVNLDKLEPVANEERLVNKSMGLLDNQKFWAGI
VFPDISHSNSTDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFSY
LQDVVEQGIIRAITGTKEKTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDS
GVVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGA
KLVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLY
GIMTWYIEAVFPGQYGIPRPWYFPFTRTYWCGEKENKNMNTPLSKKGNADAVCIEEDPSH
IEPGVYIENLMKIYSHGNKLAVDGLTLKFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGKDIRSELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEQVKAEMEQ
IVNDVGLPHKRKSRTNTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQARTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTMVKRDY
DLSLQSCRNSASTVSYMKKTEKEDSVSDSSSDAGLGSEPESETTTIDVSLISSVIFKHVP
EARLVEDLGHELTYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVA
EDSGVDSVELSDGVVPTRTRRRHAFGDHQSCLKPFTEDDFDLNDSEGDPESRETDWLSGI
DGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPF
GKYPSLALHSSMYGEQFTFISNDIPEDPHNNKLLGALMEKPGFGTRCMEGEPIPETPCTA
VEDDDWSVPQVPQSVRDIFNNGNWTMENPSPLCKCSCEGRKRMLPECPAGAGGLPPPQMM
ISDKDTLQNLTGRNLSDYLVKTYAQIIGKSLNNKISVNEFRYGGFSLGARGSQVLSHTEE
VDNAIVQLRKRFHLENGTAAHRFFSSLSNFIQGLDTKNNVKIWFNNKGWHSIGSFVNVMS
NAILRSSLPPGKDPTKFGITAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPA
SFVVFLIQERVTKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQDAYV
SSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLEL
FGSNDIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVG
KNLFAMAIEGVIFFFITVLIQYRFCFKARSSTSHLKPIGEEDEDVARERQRILSGGGHSD
ILELRQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSDVTGGEA
YLAGKSVTTEINEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIR
KLGLIKYVDKAAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSI
IKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGGVQHLKNRFGDGYTIILRVAGPDP
NLRSVMVFIEQELPGSTLKEKHRNMLQYQLPSSLTSLARIFSLLSKNKEALSIEDYSVSQ
TTLDQVFVNFAKDQSDEDHLKDIHLSKRDAVVVEIPQLNSFLMDNKTRESCV
NT seq
6819 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccactcagctgggtctactgctatggaagaacttcacctacagacgaaga
caaactatccagttgctgattgagatcatttggcccttgtttatctttttcatcctgata
tcagtccggatacattatccaccccatgagcaacatgaatgccacttccctaacaaggct
atgccctcagcaggtaccctgccctgggtacaaggcattgtctgtaatgccaacaatccc
tgctttcgtaatccgacccctggagagagtccaggcatagttggaaattttaatgactct
ataatctcccgcctgtttaatgatgccaagaagatgctgttgtacacccagagcgataag
agctatgaaggctacttaggaatgctgaaggccctcaggaagcttcagacgaaccctgct
cgattcaagctgaaggacttcttgaaagacgatgagactctttctcactttctacaccac
aacgcatcgctttctcatcacacactgaagcaaattttggaggctgatgtcaatttggag
aaggtgctcacaaaaggttttggattccatctcagagatctttgcaactcaacacctctg
gaggagttcgtccacattgcagaccggaatgtgtcccatttgactcaagaaatcatttgc
aaatcatccagtgactggctgaacaaggctcagaaccacttcctctccaatttggacttt
ctgaaaccgattcggaaggatgcgaggtcagaccccaaagccatccaagaagtctcagct
gcaactaacaaccttctggagagccttggagcgctgggtgtcgagcttgccagtatgaag
agctggaaagatatgagaaaggagatcctgtatctgactgcaaactcaacgggatctccg
aaactggtgtaccaggccgtgtcacgcattgtttgtggacatccagaaggaggcggccta
aaaatcaagtccctcaactggtacgaagataacaactacaaggctctgtttggacaccac
ggcaatgacagtgacagtgagcccatgtccacctatgacaactcttccactccctactgt
aacaacctaatgaggaaccttgagtccagtcccatttccaggatgatctggagagcccta
aaacctcttctcatggggaagatcctatacaccccagacactccagcaacacagaggatc
atccatgaggttaataagaccttccaggagctgggcgtgctgagagaccttggcggtatg
tgggaggaaatgaagcccaagttttggagcttcatggagaacagtgaggagatggactta
gtcaggtccctgctccaaagcaacaccagctctgctttcctgaacgctcaactcagtgag
actgagtggcgtgtgtcagatgtggcacacttcctcacaaaagcctcagaggaccgaaga
cctgcgggttcagcgtacacatggagagacgtgttcaacgaaaccgaccaggccataaag
gccatttcacagtttatggagtgtgtgaacttggacaaactggaaccagttgctaacgag
gaacgcttggtcaataagtccatgggtcttcttgataaccagaagttctgggctggaatc
gtgtttcctgacatctctcacagtaacagcacagatctgccgcctaacgtcaactacaaa
atccgcatggacatcgataatgtggagaggactaacaagattaaagacggatactgggat
cctggtcccagagcagacccctttgaggaccttcggtatgtctggggtggattttcttac
ctgcaggatgttgttgagcaaggaattattcgagctatcactggcactaaggagaagacg
ggcatctacattcagcagatgccttacccctgctatgttgatgacatattcctgcgagtt
atgagccggtcgatgcctctcttcatgactttggcatggatgtactcagtagccatcatc
atcaagggggtggtttatgagaaggaggcacggctgaaggagaccatgcggatcatggga
ctgaacaacggcaccctgtggctgagctggtttattagcagcttaatcccactgttgatc
agtgcgggcttactggtgatgttgttgaagatgggcaatctgctgccgtacagcgactca
ggcgtggtgtttcttttcctgggatcctttggtgtcgtaaccatcatgcagtgttttctt
atcagcactctgttttctcgtgccaacttggcggcagcctgcggaggaataatatacttt
accctctacctgccctatgttttgtgtgttgcctggcaagactacgtgggatttggagca
aaacttgtagtgagtcttctttcccctgtggcttttggttttggctgtgagtattttgcc
ctgtttgaagaacaaggtgttggaatccagtggtcaaacctactcgctagccctctggag
gaggacagctacaacctgaccacctctatatgcctcatgctgtttgacgcagtgttatat
ggaataatgacctggtacattgaagcagtttttcctggtcaatacggtatccccaggcct
tggtatttccctttcacaaggacctattggtgtggagaaaaggagaataaaaacatgaat
acccctctgtcaaagaagggtaacgctgacgctgtgtgcatcgaggaggacccaagccac
attgaaccaggtgtttacattgaaaatctaatgaagatctacagccatggaaacaagctg
gctgtggatggactgacccttaaattctatgaagggcagatcacctccttcctcggccac
aatggagctggcaagactacaactatgtcaattctgaccggattgttcccacccacctct
ggtactgcctacatcctcggcaaggatatccgctctgagctcagcaccatcagacagaac
ctgggggtctgtccacagcataatgtgctattcagcatgttgacagttgaggagcacatc
tggttctacgctcgcctgaaagggcttcctgaggagcaggtgaaggctgaaatggaacag
attgtaaacgatgttggactgccacacaagcgaaagtctcgcacaaacaccttgtcaggt
gggatgcagaggaagttgtcagtagcattggcttttgttggtggctctaaggttgtcatt
ctggacgaacctactgctggtgttgatccatatgcccgcaggggaatctgggatctgctc
ctaaaatacagacaggcccgcaccatcatcctttccactcatcacatggatgaggctgac
atcttgggtgaccgtattgccatcatttcccatggcaagctgtgctgtgtgggctcctct
ctcttcctaaagactcatcttggaacaggatactacctgaccatggtcaagagagattac
gacctgtctctacagtcctgtaggaactctgccagcaccgtctcctacatgaaaaaaaca
gagaaggaggacagtgtatcagatagcagttcagatgctggtctgggcagcgaaccagaa
agtgagacaaccactattgacgtctccctcatctccagtgtgattttcaagcatgtccca
gaggcccgtctggtggaagatcttggccatgaactcacttacgtcttgccttaccagtca
gctaaagatggagcctttgttgagcttttccatgagcttgatgaccgacttactgacttg
ggaatttcaagttatggaatttctgacaccaccttggaagagattttcttgaaagtggca
gaagatagtggagttgattccgttgagctttcagatggagttgtaccaaccaggacccga
cggcgtcatgcttttggagaccaccagagttgcctgaagcccttcacagaggatgacttt
gacttaaacgactctgaaggtgacccagaatcacgtgagactgactggctcagtggaata
gacggcaaaggttcatatcaggtcaaaggctggagtctgaagagacagcagtttgttgcg
ctcctctggaaacgatttctctacgctcgtcgctccaggaaaggcttctttgctcagatt
gttctgccagcagtgtttgtgtgtattgcactagtgttcagcctcatcgttcctccattt
gggaagtacccaagtctggctctgcattccagcatgtacggagaacagtttaccttcatc
agcaatgacatacctgaagatccccacaacaacaaactgttgggagctctgatggaaaaa
ccaggatttggaacacgctgcatggaaggggagccaataccggaaactccttgtacagca
gttgaagatgatgattggtcagtgcctcaggtccctcaaagtgtaagagatatattcaac
aacggcaactggaccatggagaatccatctcctctgtgtaagtgcagctgtgaaggtcgt
aaaaggatgctgccagagtgtcctgctggggccggtggacttccaccaccacagatgatg
attagtgacaaagacaccctgcagaatttgactggtagaaacctgtcggattatctggtt
aaaacctacgctcagatcattggcaagagcttgaataacaagatctcggtcaacgagttc
agatacgggggattctcactgggtgctcgtggttcccaggttttgtcccacacagaagaa
gttgataatgctattgtgcaactgaggaaacgcttccatcttgaaaatggaacggcagcc
catcgtttcttcagcagtctctccaattttatccaaggattggacaccaagaataacgtc
aagatttggtttaacaacaagggctggcacagcattggctcttttgtcaacgtgatgagc
aacgccatcctgcggtcgagcctgccacccggtaaagaccccacaaagttcggcatcact
gcttacaatcatcctctgaatctcaccaaggagcagctgtcacaagttgcactgatgaca
acgtctgtggacgtgctggtgtccatttgtgtcatcttcgccatgtccttcgtccctgcc
agttttgtggtcttcctcatccaggagagggtaaccaaggctaaacatatgcagttcatc
agtggggtgcaacccttcctctactggctggccaactttgtctgggatatgtgcaactac
atcgttccagccacgctagtgatcatcatatttgtctgtttccaacaagatgcctatgtg
tcttccaccaatctgccagtgttggccctcctgcttctactctatggatggtcaatcacc
cctctgatgtacccagcatctttcttctttaagatccccagcactgcctacgtggttcta
actagtgtcaacatactaattggaatcaatggcagtgtgtccacgtttgtcctggagtta
tttggaagcaatgatatcggcggtattaatgacattttgaagaatgtcttcctcatcttc
cctcacttctgcctgggtaggggactgattgatatggtaaagaatcaagccatggctgat
gctttggagagatttggtgaaaaccggtttcgctctcctctggcatgggacatggtggga
aagaacctgtttgccatggccatagagggagttatattcttctttatcactgtcctcatt
cagtaccgcttctgcttcaaagccagatcctccaccagccatctgaaacctattggagag
gaagatgaagatgttgccagagagagacagaggatcctgagcggtggtggacattcggac
attcttgagctgaggcagctcaccaagatttacaagcggaaacagaagccggcagtggac
cgcctgtgtgttggcattcctcccggagagtgttttggtttgcttggggtcaacggagca
gggaagaccagcaccttcaaaatgttgacaggagactcagatgtcaccggcggtgaggcc
tacttagctggcaagagtgtaacaacagagatcaatgaggtgcatcagaacatgggctac
tgtcctcagtttgatgctatcaatgaccttttgactggaagagagcaccttgagttctac
gctatcctgagaggagtacctgagaaagaagtctgtgaggtggcagagtggggtattcgg
aagctgggtctgatcaagtatgtggacaaagcagctgggagctatagtggaggaaacatg
aggaaactctccactgccattgcactcataggaggaccacctgttgtgtttctggatgaa
ccaacaacaggtatggaccctaaggcacgtcgggccctttggaatgccatcctaagcatc
atcaaagagggacgatccgtggtcctcacctctcacagtatggaggagtgtgaagcactc
tgcaccagaatggctatcatggtgaatggcaggttccgctgtctgggcggtgttcaacac
cttaaaaacaggttcggagatggctacaccatcatccttagagtggcagggccggaccca
aacctgcggtcggttatggtgttcatcgaacaggagctgccggggagcacgttgaaggag
aaacaccgcaacatgctgcagtaccagcttccttcttccctcacctcccttgcccgaatt
ttctcccttctctccaagaacaaggaggcacttagcatagaggactactctgtctctcag
actactttagaccaagtgtttgttaatttcgccaaggaccaaagtgacgaggaccatttg
aaagacatccacctgagcaagcgagatgcagttgtggtggaaattccccaattaaactct
ttcctcatggacaacaagacaagagaaagctgtgtctga
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integrated database retrieval system
