Girardinichthys multiradiatus (darkedged splitfin): 124868196
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Entry
124868196 CDS
T08099
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03030
DNA replication
gmu03410
Base excision repair
gmu03420
Nucleotide excision repair
gmu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124868196 (rfc1)
03410 Base excision repair
124868196 (rfc1)
03420 Nucleotide excision repair
124868196 (rfc1)
03430 Mismatch repair
124868196 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmu03032
]
124868196 (rfc1)
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124868196 (rfc1)
DNA replication proteins [BR:
gmu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124868196 (rfc1)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124868196 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_30
AAA_5
AAA_17
RuvB_N
Rad17
AAA_14
AAA_33
AAA_16
AAA_18
AAA_7
nSTAND3
BRCT_2
RNA_helicase
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
124868196
NCBI-ProteinID:
XP_047221086
LinkDB
All DBs
Position
5:complement(15182620..15194103)
Genome browser
AA seq
1163 aa
AA seq
DB search
MDIRRFFGPLSGKPATNGDSKADKKKTNSSEEDVKKKKKKKENIKVKSSKNEEHRKGSEK
KRKKRQVIESDSEAEEEEPVMKSKKSSKEKAKPPPKKDPVQYVSETDSDSDNFQSLKKVS
KSKQNCTDKKSEEESCSPKTKERVKSPAKPPSSQEKTGIKSPKVPTTPKLPPPPQAKQTP
TSVFDYFGSGEIHRSDKKLVASTKRKAPTRNSDDLISDEEMARQLQMEEDMEVEKQVHED
EEFARTLAMLDAEPQPKKARKNSEEKVGQTTTPRKSSPLKTSQSASEDMISPSPKKSPAP
VKTSSKLAMMKKRDEVKDEGVKSKTPTSPMKNKISPKKEPRASSISDMKFTPKTGTTSTA
PTTSPKKPESTSTSPDDAEKKKMHSSAFRNYLNRDGPRALGSKEIPKGAENCLEDCVFVL
TGVLESMERDDAKALIERYGGKVTGNISKKTTYLVQGRDSGVSKLEKAESLGTKILDEDG
LLELIRTKPGKKSKYEIAAEAESKASKTRSPPSQRSKSTPKAQKTSPSKGNSRSPQTPSP
SKTGQAQSRRPRTSGSSTPSGRGCGQTARRELDLPSSSSSSAAGPSPPSPQWEAATLLWV
DKYRPRSLKAVIGQQGDQSCTNKLLRWLQNWYKHHSGGLDKPAVARFSKFGGGKDDGSGY
KAALLSGPPGVGKTTTAALVCEELGFSYVEMNASCTRSKNSLKEVVAESLNNTSIENFYK
GTSQTVTSKHVLIMDEVDGMAGNEDRGGIQEMIGLIKNSKIPIICMCNDRNHPKIRSLAN
YCFDLRFQRPRVEQIKGAMMSIAYKEGIRIPPPALNEIILASNQDVRQVIHNLSMWSAKD
KVMTYDQCKADAASARKDMKLGPFDVCRKVFASGEETAHMSLIDKSDLFFHDYSLAPLFV
QENYPHVRPAAARGDMKAHLVLLSKTADSIADGDLVDRRIRSGQNWSLLPTQAIYASVLP
GELMRGYMSQFPVFPSWLGKNSSTNKHSRIVQELTSHMSLKTLSSRQAVNLDYLHYLRQA
LLHPLQRHGAEGAAQAVKLLDDYQLLKEDVDSIMETSVWGGQPDPYAKLDSKVKAAFTRA
YNKEAHLTPYSLQAVKKGRRGGGDLELGGEEGPDDQQSDDEAEGLKTDAMIKQKKTKTTK
ESTKEKKEDSGKGKGKGKGKAKK
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaggcggttctttggtcctttatcagggaagcctgccacaaatggagacagc
aaagcagataagaaaaagacgaattcctcagaagaagatgtaaagaagaagaagaagaag
aaggaaaacattaaggtcaaaagctccaaaaatgaagagcatcggaaaggcagcgagaag
aaaagaaagaaacgtcaagtcatagaatcggattctgaagcggaggaggaagagccagtg
atgaagtctaagaaatcctccaaagagaaagcaaaaccacctcctaagaaggatccagtg
cagtacgtctctgaaacagactcggatagtgacaactttcagagtctgaagaaggtctcc
aagtccaaacagaactgcactgataaaaagtcagaagaagagagttgtagtccaaagacc
aaagagcgggtgaagtctcctgctaagcccccttccagccaggagaaaacagggatcaag
agccctaaagtacctacaacccctaaactaccccctccccctcaggccaaacagactccc
acctctgtattcgactactttggcagtggagaaattcaccgctcggacaagaagctggta
gccagcaccaaacgaaaggctccaactcgaaactcggatgacctgataagcgatgaggaa
atggcccgtcagctgcagatggaagaggacatggaggtggaaaaacaggtccatgaggac
gaggagtttgccagaacgttggccatgctggacgcagagccacagcccaaaaaagcgcgc
aaaaactctgaggaaaaagtgggccaaaccacgacccccagaaagagcagcccgttgaag
accagtcagagcgcttcagaggacatgattagtccatcgcccaagaagagccctgctccg
gtcaaaactagctccaagctggctatgatgaagaaacgggatgaggtgaaggacgaagga
gtgaaaagtaaaacgcccacttcgccgatgaaaaacaaaatttctccaaagaaagagccc
cgtgcttcatcgatttcagacatgaagtttacacccaaaacaggaacaacatcaacagcg
cccacaacgtctcctaagaagcccgagagcacaagtacgagtcctgatgatgcagagaag
aagaagatgcactcttcagctttcaggaattacctcaacagagacggaccacgagccctg
ggatccaaggaaatcccgaagggagcagagaactgtttggaggactgcgtgttcgtactg
acgggagtcctcgagtcgatggagagagacgatgccaaagctctcatcgagcgctacgga
ggcaaagtgacgggcaacatcagcaagaagaccacctacctggtccagggcagagacagt
ggagtgtcaaagcttgagaaggctgagagtttaggcaccaagatcctggatgaggatggt
ttgttggagctgatcagaaccaaaccaggaaaaaagtccaagtatgagatcgctgcagaa
gctgagagcaaagcctcaaaaactaggtctcctccaagtcagagatcgaagagcaccccc
aaagctcagaagacctccccctccaagggtaactcccggtcgcctcagaccccgagcccc
tccaagactggccaggcacaaagtcgcagacccaggaccagcggtagcagcactccatct
gggagaggctgcggacaaacagcccggagggagctggaccttccctcctcctcgtcttct
tcagctgcaggaccctcacccccatcaccccagtgggaggctgccactctgctgtgggtg
gacaagtatcgtccccgtagtctgaaggctgtgatcggccagcagggggaccagagctgc
accaacaagctgctccgctggctgcagaactggtacaaacaccacagtggaggcctggac
aaacctgcagtagcaaggtttagtaaatttggaggagggaaagatgacgggtcaggatac
aaagctgctctgctctctggacctccgggagtggggaagaccaccactgctgcactggtc
tgtgaggagctgggcttcagctacgtggagatgaatgccagctgcacccgcagcaaaaac
agcctgaaggaagtcgtagcagagtcactgaacaacaccagcatcgagaacttttacaaa
ggaacgtctcagacagtgaccagtaagcacgtcctgatcatggatgaggtggatggtatg
gctggtaatgaagaccgtggaggaatccaggaaatgatcggtctgatcaaaaactcaaag
attcccatcatctgcatgtgcaacgaccgcaaccatccgaagatcagatcgttggccaat
tactgcttcgatctgcgcttccagaggccgcgggtggagcagatcaagggagccatgatg
tctattgcttataaggaaggaattaggatccctccaccagctctgaatgaaataatctta
gcctccaaccaggacgtgcgacaggtgattcacaacctgagcatgtggtcagccaaagac
aaggtgatgacgtatgaccagtgcaaggctgacgcagccagcgcccgcaaggacatgaag
ctggggccgtttgacgtctgcaggaaggtgttcgcctcgggagaagaaacggcccacatg
agcctcatcgataagtccgacctcttcttccacgactactcactggcgccgctgtttgtc
caggagaactacccgcacgttcgtccagctgcggctcgcggagatatgaaggcccatctg
gtgctgctcagcaagactgccgactccatcgctgacggcgacctggtggacaggcggatc
cggtcgggacaaaactggtccctgcttcccactcaggccatctatgccagcgtgttacca
ggcgagctaatgagaggctacatgtctcagttcccagtgttccccagttggctcggcaag
aactcctctactaataaacattcccgcatcgtacaagagctgacctcacacatgagctta
aagaccctgagcagcagacaggctgtgaacctggactaccttcactacctgcgacaggcg
ctgctgcatccgcttcagaggcatggagctgagggcgccgcccaggccgtgaagctcctg
gatgactaccagctcctcaaggaggacgtggacagcatcatggagaccagcgtctggggc
gggcagcctgacccttacgccaaactagactccaaggtgaaggcagctttcacacgggcg
tacaacaaagaggcccacctgacgccgtattctttgcaagccgtgaagaaaggtcgcaga
ggtggaggggacctggaattgggaggagaggagggcccagatgatcagcagtctgatgac
gaagcagagggcctcaaaactgacgctatgatcaaacagaagaagaccaaaacaactaaa
gagtcgactaaggagaagaaggaagattctgggaagggcaaaggcaaggggaaaggcaaa
gctaagaagtga
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integrated database retrieval system
