Girardinichthys multiradiatus (darkedged splitfin): 124868225
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Entry
124868225 CDS
T08099
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04120
Ubiquitin mediated proteolysis
gmu04137
Mitophagy - animal
gmu04144
Endocytosis
gmu04340
Hedgehog signaling pathway
gmu04350
TGF-beta signaling pathway
gmu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124868225
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124868225
04350 TGF-beta signaling pathway
124868225
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124868225
04137 Mitophagy - animal
124868225
09144 Cellular community - eukaryotes
04520 Adherens junction
124868225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124868225
04121 Ubiquitin system [BR:
gmu04121
]
124868225
03029 Mitochondrial biogenesis [BR:
gmu03029
]
124868225
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124868225
Membrane trafficking [BR:
gmu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124868225
Autophagy
Mitophagy
Other mitophagy associated proteins
124868225
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
HECT type E3
124868225
Mitochondrial biogenesis [BR:
gmu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
124868225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
124868225
NCBI-ProteinID:
XP_047221152
LinkDB
All DBs
Position
5:35542723..35609237
Genome browser
AA seq
776 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNRL
GPNDNDTVRGQIVVSLQSRDRIGSGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVITPVNGAVASGPPGEQRIQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNSPSSNGSRVATDSQNTNL
SHPPQLKEQGGPGVPPQALSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGH
CRIEVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNP
YYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQL
LGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIPHELKPNGKSIP
VTEETKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKI
DIADWKSNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGA
AGPRLFTIHQIDANTNNLPKAHTCFNRIDIPPYEGYDKLYDKLLTAIEETCGFAVE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaaggagttaggagaaatggcccagtaaagctgcggttgacagtcctctgt
gcaaagaacctggcaaagaaagacttctttcggttgccagatccttttgctaaagtggta
gtggatggttctggacaatgccactctacagatactgtgagaaatactctagatccaaag
tggaatcaacattatgatctgtacattggaaagtcggactccattacaatcagtgtctgg
aaccacaagaagatccacaaaaagcagggcgcaggtttcctcggctgtgtccggctcttg
tccaacgccatcaatagactcaaagacacaggctatcagagactggatctgaataggctg
ggccccaatgacaatgatactgtaagaggacagatagtagtgagtcttcagtccagagat
cgcatcggatccgggggacctgtggttgactgcagtcgtctgtttgacaatgacttgcct
gacggctgggaagagaggaggacagcatctggaaggatacagtacctgaaccacatcact
cgcaccacgcaatgggagagacccaccagaccagcgtcggagtactccagcccatcgggg
cgtccgttgagctgtgtggtggatgaaaacacaccagtgattactcctgttaacggggct
gtggccagcgggcctccaggggaacagcggatccaggaaagaagggttcgatcgcagcgg
catcgaaactacatgagtcgaacacatctgcatacgcctcctgatctgcctgagggctac
gagcaaagaacaacccaacagggccaggtgtacttcctccacacacaaaccggagtcagc
acctggcatgacccccgagtacccagggacttaagcaatgtaaactgtgaggagctagga
ccactgcctccaggctgggagatcagaaacactgccaccggccgcgtctactttgtcgac
cacaacaatcgaacaacacagttcacagatccacgactgtctgctaacctgcatctagtg
cttaacagcccgagttcaaatggttcccgtgtggccacggacagccaaaacactaacctc
agtcatccgccacagttgaaggagcaaggtggtcctggagttcctccgcaggctctgtct
cccgctcagttacctgaagaggctgagtgtctgaccgtgcccaaatacaagagagacctg
gtgcagaagctgaagattctccggcaggagctctcacagcaacaaccccaagctggccac
tgccgcatcgaggttagccgagaggagatctttgaggagtcgtatcggcaggtgatgaag
atgcgtccaaaggatctttggaaaagactgatgatcaaattcagaggagaagagggactg
gactatggtggagtagctagggaatggttgtacctgctgtcacacgagatgttgaaccca
tattacggcttgttccaatactccagagatgacatctacactctgcagattaacccagac
tctgccgtcaacccagaacacctgtcttacttccattttgtgggccgcattatgggcatg
gcggtgtttcacggccactacattgacggcggcttcacgttgccgttctacaagcagctg
ctcggaaaaccgatcacgctggacgacatggaatctgtcgaccccgacctccacaacagt
cttgtttggattttggacaacgacatcacaggtgtcctggaccacaccttctgtgtagaa
cacaacgcttatggagaaatcatcccgcacgagctgaagcccaatgggaagagcatcccg
gtgacggaggaaaccaagaaggagtatgtcaggctgtatgtgaactggcgtttccttcat
ggcattgaggctcagtttctggccctccagaaaggcttcaatgaggtcatcccacagcac
ctactcaaagccttcgacgagaaggaattagagctgatcgtttgcggactgggaaagatc
gacatcgccgactggaagtccaacactcgcctgaagcactgcaccccagacagcaacatt
gtcaagtggttttggaaagctgtcgagtcgtttgatgaggagaggagggcgcgactcctg
cagtttgttactggctcgtcgagagtcccactgcaaggcttcaaggctttacagggtgcg
gcaggacccagactcttcaccattcatcagattgatgcaaacaccaataatctgcccaaa
gcccacacctgcttcaaccggatcgacattcctccctacgagggctacgataaactgtac
gacaagctactgacggcgattgaggagacgtgtggcttcgcagtggaatga
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