Girardinichthys multiradiatus (darkedged splitfin): 124868241
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Entry
124868241 CDS
T08099
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gmu00536
]
124868241 (slit2)
Glycosaminoglycan binding proteins [BR:
gmu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
124868241 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_2
LRRNT
Laminin_G_1
LRR_9
LRRCT
EGF_TEN
LRR_1
LRR_14
hEGF
EGF_DL_JAG
EGF_Teneurin
JAG1-like_EGF2
Laminin_G_3
EGF_3
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
124868241
NCBI-ProteinID:
XP_047221178
LinkDB
All DBs
Position
5:complement(15406857..15542792)
Genome browser
AA seq
1586 aa
AA seq
DB search
MVGVVRSVGLGRSLETALRLLLLRTFLVLVLLSRAYSQPCPPQCSCTGTTVDCHGQGLRS
VPRNIPRNTERLDLNANNLTKITKGDFAGLRHLRVLQLMENKITTIERGAFQDLKELERL
RLNRNNLAVLPELLFLGTTKLHRLDLSENQIQGIPRKAFRGAVEIKNLQLDYNHISCIED
GAFRALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLHCDCHVAWLSEWLRQRP
RLGLYTQCMAPPHLRGHNVAEVQKKEFVCTDPEEGHQSSSSSSCSVLQCPQSCTCSNNIV
DCRGKGLTEIPTNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAF
QGLRSLNSLVLYGNKITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLY
DNKLQTIAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLA
NKRIGQIKSKKFRCSAREQYFIPGVHHVSCNEDYRSKLGGDCFADLACPEKCRCEGTTVD
CSNQKLTKIPDHIPQYTTELRLNNNEFTVLEATGIFKKLPQLRKINLSNNRISDIEEGTF
DGASGVNELILTSNKLENIHHRMLKGLSGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLY
DNQITSMNPGAFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQNPYFLK
EIPIQDVAVQDFACEDGNNENSCSPVLRCPAECSCLDTVVRCSNKGLTTLPKGLPKETTE
LYLDGNHFTQVPVELSNYKHLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPV
RAFDGLKSLRLLSLHGNDISLIPEGAFKDLSSLSHLALGANPLYCDCHMQWLSDWVKSGY
KEPGIARCAGPGDMTDKLLLTTPSKKFTCTGPVDLSIQAKCDPCLSSPCSNDGTCTSDPV
HYYRCTCPYGFKGQNCEEPIHACISNPCQNSGTCHLKEGEGSNFWCVCLEGFEGDTCEIN
IDDCEDNDCENNSTCVDGINNYTCMCSPEYTAATNEVERGELCEEKLDFCAPELNPCQHD
SKCILTPQGYKCECTPGYVGEHCELDFDDCEENKCQNGGHCIDAVNGYTCICPEGYSGLF
CEFTPPMVLPRTSPCDNHDCLNGAQCVAVGTDLRCQCLHGYEGEHCETLVSVNFVNRESY
LQLPSNLLSPQTNISLQIATDEDSGVLLYKGDNDHIAMELYRGRLRVSYDTGSYPPSAIY
SVETVNDGSFHSVDLVAADQTLSLSIDGGPPKSISSISKQSTLNIDSPLYLGGMPEQASA
SGGLSALQLSSGGRNGTSFHGCLRNLYINGKLQDLGARQNPGSPGSGNLRNNRQWLGNGV
EPGCQPCQRGACIQGDCHPTGNQGFTCTCHPGWTGALCDQQVSNPCDGNKCIHGTCLPIN
SYSYSCRCQPGFAGVLCDEQDLDTANPCSLSRCKHGRCRVSGLGKAYCECNSGYTGEACD
REVACRGERVRDVYQRQQGYAACQTQEKVSRLECRGSCRGGAEGQGTCCTPLRSKRRKYT
FQCTDGSSFVQEVEKVVKCGCTKCSS
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagttgtgcgctctgttggccttggccgctccctggagactgcactgaggctt
ctgctgctgaggacctttctggtcctggtcctgttgagcagagcgtatagtcagccgtgc
ccgcctcagtgttcctgcaccgggaccacggtggactgtcacggccaaggtctgcgcagc
gtacccaggaacatacctcgaaacacggaaagactggatctgaatgcaaacaacctcact
aaaatcaccaagggggattttgcaggactgaggcatctgagagtcttgcagttaatggag
aacaaaatcaccactattgaaagaggagcgtttcaggacctgaaggagctggagagactc
cgcctgaatcggaataatctggctgtgcttcctgagctacttttcctgggaacgacaaag
cttcacagacttgacctgagcgaaaaccagatccaggggatcccaaggaaagccttcagg
ggagctgtggaaatcaagaacttacagttggactacaaccacattagctgcattgaagat
ggagccttcagagcgttacgtgacctggaagtgctcacactgaacaataacaacattagc
cggctgtctgtcgccagttttaaccacatgccgaaactcaggaccttccgtcttcactcc
aacaacttgcattgcgactgccatgtagcctggttgtccgagtggctgcgacagcgcccc
cgcctgggcctctacacacagtgcatggcccctcctcatttgcgggggcacaatgtggct
gaggtgcagaagaaggagtttgtgtgtacagatccagaagaaggtcatcagtcgtcatca
tcttcctcctgcagtgtgttacagtgcccacagtcctgcacctgcagtaacaacattgtg
gactgcagaggaaagggtctgacagaaatacccaccaacctgcctgaaaccattactgag
atacgactggagcagaacgccatcaaggtgatcccagctggggccttttctccttataag
aagctgcgcagaatagatttgagtaacaaccagatttcagaattagcttcagatgccttc
cagggtctgcgctccctcaactctttagtcctttatgggaacaaaatcactgagatttcc
aagggactgtttgagggattgttttcactgcagctgttgttgctaaatgctaacaagata
gcatgtctgcgtgtggacgcatttcaggaccttcacaacctcaatctgctttctctgtat
gacaacaagctccagactattgcaaagggaacgttctcctcactaagggcaatacaaaca
cttcatttagctcaaaacccatttatctgtgactgccatctgaagtggctggctgactac
ctgcaagacaatcccatcgagacgagcggtgcccgctgcaccagccctcggcggctcgcc
aacaagcggatcggacaaatcaagagcaagaagttccgctgctcagctagagaacagtat
ttcatcccaggagtacaccatgtcagctgtaacgaggattatcgcagcaagctcggaggt
gactgcttcgctgacttggcctgccccgagaagtgccgctgtgagggaacgacggtcgac
tgctccaaccagaaacttaccaaaatccccgatcacattcctcagtacaccactgagctg
cgtctgaacaataatgagttcacggtgcttgaggcaacggggatcttcaaaaagttgcct
cagctgaggaagattaatctgagcaataatcgcatcagtgacatagaggaggggactttt
gatggagcttcaggggtcaacgagttgattctgacctccaacaaactggagaacatacac
caccgcatgctgaagggactcagtggcctccgcacacttatgctgaggagtaacaggatc
agctgtgtgagcaacagcagcttcgtagggttgagttctgtgcggctcctttcactctat
gacaaccagatcacctccatgaaccctggagccttcgacacactgcactccctctccaca
ctaaacctcttggccaatcccttcaactgtaattgtcacctggcctggctcggcgattgg
ctgaggaggaaacgcatcgtcaccggaaatcctcgctgccagaatccttatttcctaaag
gaaattcctatccaggacgtagctgttcaggactttgcctgtgaagatggtaacaatgag
aacagctgctctcctgttctgaggtgtccagccgagtgttcttgtctggacactgtggtg
cgctgcagcaacaaaggtctcaccacactgcccaaaggcctcccaaaagagaccactgaa
ctgtatttggacggaaaccacttcactcaagttccagtggagctctcgaattacaaacac
ttaacactcattgatttgagtaacaaccagatcagcacgttgtccaaccacagcctcagt
aacatgtccgagctgcttacactaatcctgagctacaaccgtctgcgatgcatcccagtg
agggcgttcgatggactcaagtctctgcgtttgctatctctccatggtaacgacatatcc
ctgattccagagggagcctttaaagacctgtcatcgctgtctcatctggctctgggtgcc
aaccctttgtactgtgactgccacatgcagtggctgtctgactgggtgaagagcggctac
aaggagcccggcatcgctcgctgtgctgggcccggtgacatgacagacaagctactcctc
accacaccctccaagaagtttacctgcacaggcccggtggatttgagtatccaggccaag
tgtgatccctgtctgtccagcccctgcagtaatgatggcacatgcaccagtgaccctgtg
cactactaccgctgcacttgcccatatgggtttaagggacaaaactgtgaggaacctatt
catgcctgcatcagtaacccctgccagaacagtgggacttgccatctgaaggaaggagaa
ggaagcaacttttggtgtgtgtgtctggagggcttcgaaggcgacacctgtgagatcaac
attgatgactgtgaggataacgactgtgagaacaactccacctgtgtagatggaatcaac
aactacacctgcatgtgctcaccagaatacacagctgctaccaatgaggtggagagaggg
gagctgtgtgaggagaaactggacttctgcgccccagaactgaacccatgtcagcacgac
tcaaagtgcattcttacccctcagggttacaagtgtgagtgcactccaggctatgtaggt
gagcattgtgagctggactttgacgactgtgaagagaacaagtgtcagaacggaggtcat
tgcattgatgctgtgaacggatacacctgtatctgtccagagggatacagtgggctgttc
tgcgaattcactcccccaatggtcctcccacgaaccagtccctgtgacaaccacgactgc
ctaaatggagctcagtgcgttgctgtgggaacagacctccgctgccagtgtctccacggc
tacgaaggcgagcattgtgaaacacttgtgagtgtgaactttgtcaaccgggagtcctac
ctgcagcttccatctaacctcctgtcaccacagaccaacatcagcctacagattgctact
gacgaggacagtggcgtcttgttgtacaagggtgacaatgatcatatcgcaatggagctg
tacaggggacgtctcagggtcagctacgacaccggatcctaccctccttctgcgatatac
agcgtggagacagtgaacgatggtagtttccattctgtggacttagtagcagctgaccag
actctgtccctgtccattgatggcggaccacccaaatccatcagctccatcagcaaacag
tccacgctcaacatagattctccactttacctgggaggaatgccagaacaggcatcagcc
tctggcggcctttctgccctgcagctcagctcaggaggccgcaacggcaccagcttccat
ggatgcctccgtaatctctacattaacggaaagctccaagacttgggggccaggcagaat
ccaggctctccaggttcaggaaatttgcggaacaacagacaatggctgggaaacggggtg
gagccaggatgccagccatgccagagaggtgcctgcatccaaggtgattgtcacccaacg
ggtaaccaaggtttcacctgtacctgccatcccggatggacaggggctctgtgtgaccag
caagttagcaatccctgtgatggcaataagtgtattcatggtacctgccttccaatcaac
tcctattcctattcctgccgctgccagcctggttttgctggtgttctctgtgatgaacag
gacctggatacggctaacccctgcagcctgtcccgttgcaaacatggcagatgtcgagtg
tcaggcctgggtaaagcgtactgcgagtgcaacagtggatacacaggggaggcatgcgac
cgagaggtggcctgccgaggggaacgggtccgagatgtctaccagagacagcaaggctat
gcggcgtgccaaacccaggagaaggtctcccgtctagagtgtcgaggcagctgcaggggg
ggagcagaagggcagggcacctgctgcacccccctccgcagcaaacgcaggaaatacacc
ttccagtgcactgatgggtcttcttttgtccaggaagtggaaaaggttgtcaagtgtggc
tgtacaaagtgttcttcgtaa
DBGET
integrated database retrieval system
