Girardinichthys multiradiatus (darkedged splitfin): 124868275
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Entry
124868275 CDS
T08099
Symbol
helz
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124868275 (helz)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
124868275 (helz)
3'-5' decay
Other 3'-5' decay factors
124868275 (helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_19
AAA_30
UvrD-helicase
ResIII
PAM2
zf_CCCH_4
AAA_22
AAA_16
PhoH
Mov-10_helical
zf-CCCH_4
AAA_5
AAA_7
Motif
Other DBs
NCBI-GeneID:
124868275
NCBI-ProteinID:
XP_047221285
LinkDB
All DBs
Position
5:34984204..35051506
Genome browser
AA seq
2010 aa
AA seq
DB search
MADRRAEKSCEEASKSLARREYEAAVTHSTDALVVLAPQASSSGAPVLPSPPSVVTAGPL
RSRALLYRIAAFLQLKNYDGADQDCKHVLPDEVARGDGSLQASLHSMLLDGSLQEVVSIL
SKALYGEPVNGIVTKDLTRLKMLFSEIETIKREMAPEYTDDQDEEVQDGWQFRPPPRGVT
SSEEYTLCKRYLEQGLCRYGAQCTSAHSQEELMEWQKRYASRLIRLKQQQESKHFTENYM
ETLIEKWMNSLSPEKVLSDRLEGVTVETSSSLSVTVTSKKSSHSWIFSLLCKPARKLFRI
ALLYDAHRPHFFVTGVSAGDRLQSVPKGCQEWTAGEESAVAADNGLHHCIYKVAVGFSTE
IFGTFRQTIVFDFGSEPVLMQRIMVDAASIQDLEHLMVARQQLLMTAKRWDSACKTIVEF
IPNETMADLERSLLARYQIPLSADQLFTQSVMDKTLTKDNYQARLHDLLYIEEIAQYKEV
SKFNIKANLQLVTSFMLTGISVGAKYAQNGQLFARFKLTETLSEDTLAGRLVMTKVNSVL
LLPLGREGFSGQAPSGVKERVYEAVIEEKTKDYIFLRICKNCCEELLLQPDRELQVELQF
QLNRQPLCEMHYALDRIKDNTILFPDVSLFPTIPWSPNRQWDEQLDPRLNAKQKEAVLAI
TTPISISLPPILIIGPYGTGKTFTLAQAVKHILRQENSRVLICTHSNSAADLYIKDYLHP
YVEAGNEHARPLRVYFRNRWVKTVHPVVQQYCLISSTQVTFQMPTREDILRHRVVVVTLS
TSQYLCQLDLEPGLFTHILLDEAAQAMECETIMPFPLASKTTRIVLAGDHMQLSPFVYSE
FARERNLHVSLLDRLYEHYPSEFPCRILLCENYRSHEAIINYTSELFYDGKLIASGKQPC
HKDFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEELRKKWPVAWGKLDEGSIGVV
SPYADQVFRIRAELRKKRMHEVSVERVLNVQGKQFRVLFLSTVRTRYTCKHKQTAIKRKE
QLVEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWEHFISICHE
NSSLHGITFEQIKGQLEALELKKTYVLNPLAPEFIPRALRPLQGHQSSSQGLHPHHHPHP
QHVLPASNKQPAQHHQQQQQQSPPKGKQANHTEHLPPDGYVQSNPAVLMANPIRAFTPPL
GATPAGIGKSPSPVQRIDPHTGASILYVPAVYGGNMVMSMPLPLPWPGYQNRFAVDPRIM
SHPAAVAYNLNLLQPQNRGSPIPYSGVTHPSPLGMAQPSPEKDLQADLARNGKVDGCTKA
EQTRLQTPERKNTDVREKQGDLDTGQSRSLDSQAEGIVGFPNALLHRKEPSATQRSLNYH
LAPPSPAFPPHPASGRTFPQQYPVPRLPYRVNQPPHPGMPQQNQQQQLSPAFTGGSHSSF
FSGSIPTHRSVQSPTVDGTESSGVEEMSSTLRTHMGHPGGQHPGLAPHTRVSNFGEDGQD
GSMVDSLDLQSPLALEALSQQQQAARLGQWGEAAGPFLQGSVAFPLPQQLAHLAQSGMAR
FPPQLLRAATWGLSANMDDEAVSSAAAGPTCTRYPGLLREMPPQEQPELREVTELQPPPQ
SRLLQYRQSQSRASVDPSSSLAPLSNHAGPFPSGLYSHETGRNLLNQNILNNQALQHPEN
PLYNTSSYPNQPPAQSGSPPPSQVKYLLQEAQWSHSGAASASQQNHLLGNQSHSLLYGLP
IMAHPSRQEQVLMQLHHQQQQQQHQQQQQNQGPDSESYHPLSPRTSAAAALHSVDEYEPR
GPGRPLYQRRISSSYPDESSPANSLSARPCQPEPQDHPQIQHQQHPHGSYNYPSHDHLWP
TNGGGPGPFQNIPCNGASTLVQHRELLASKVHRETDEQVKAEPAAAQQAHPHNLNSLQHQ
FPPLMPNKKQQQQPPPPPPPPPQPPTEPTQGAPNLTKPPTMSYASALRAPPKPRAVRPEQ
VKKNSDPLSLLQELSIGSSNGSNGYYSYFK
NT seq
6033 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaggagagcggagaagtcatgtgaagaagccagcaaatcgttagccaggcgg
gagtacgaggcggcagtcacccacagcacggatgccctggtggtccttgcgccccaagcg
tcatcatctggtgcccctgtactgccgagccctccttcagtggtcaccgccggacccctc
cgcagccgagccctgctctaccgaattgctgccttcctacagctgaaaaactatgatgga
gctgatcaagactgcaaacatgttctgccagatgaggttgctcggggagatggctctcta
caggctagtttgcactccatgcttttggatggcagcctgcaagaggtggtcagcatccta
tctaaagccttgtatggagagccagtgaatggcatcgttacaaaagacctgaccagatta
aaaatgctcttctccgaaattgagacaataaaaagggagatggcccccgaatacacagat
gaccaggatgaagaagtccaagatggctggcagttccgacctcctcccagaggggtcact
agcagtgaggagtacaccctctgtaaaaggtacttggagcaaggcctgtgtcggtatggc
gcccagtgtacgtcagcccactcgcaagaggagctgatggagtggcagaaacgttatgcc
tcacgactcattcgcctcaaacagcagcaggaaagcaaacacttcactgagaactacatg
gaaaccctaatagaaaagtggatgaactccctttccccagagaaagtgttaagtgacaga
ttagaaggagtgactgttgagaccagctccagcctttctgtgacagtcacctctaaaaag
tcctcccactcctggatcttttccttactgtgcaagccggctagaaagctgttccgcatt
gccttgctctacgatgcccatcgaccacacttcttcgtcacaggcgtttcagctggggac
cgcctccagtcggttcccaaaggatgccaagagtggacggcaggagaggagtcagcggta
gcagccgacaatggccttcaccattgcatctacaaagttgcagtgggcttcagcactgag
atctttggtaccttcagacagaccattgtttttgactttggctctgagccagtgttgatg
cagaggatcatggtggatgccgcctctattcaagacttggaacacctaatggtagccaga
cagcagcttttgatgaccgcaaagcgctgggactctgcctgtaaaaccattgtggaattc
atacccaatgaaaccatggccgacctggagagaagcctccttgctcgctaccagatacct
ctatcagccgaccagctcttcacccagtcggtcatggacaaaactctaaccaaagacaac
taccaggcccggctgcatgacctgctctatatagaagagatcgctcagtataaggaagtc
agcaagttcaacatcaaggcaaaccttcagctggtaaccagcttcatgctaactggcatt
tctgttggagcaaagtatgctcagaacggacaactctttgcacgcttcaaactcaccgaa
acactttccgaggacactctagctgggagactagtaatgaccaaggtgaattcagttctg
ctgcttccgttggggcgtgaaggcttcagcggtcaggctccttctggggtcaaagagcgt
gtctatgaggctgtgattgaggagaagaccaaggattacatcttcctgaggatttgcaaa
aattgttgtgaggagctcctgctgcagcctgacagagaattacaggtggagctccagttt
cagctcaacagacagccactgtgtgagatgcactacgccctggatcgcatcaaagacaat
accatccttttccctgatgttagcctcttccccaccatcccctggagcccaaacaggcag
tgggatgagcagctggaccctcgtctgaatgccaagcagaaagaggccgtcctggccatc
accacacccatctccatctctcttcccccaatcctcatcattgggccctatggcactggc
aagaccttcaccctggcgcaggctgtcaaacacattcttcgccaggagaacagcagggtc
ctgatctgcactcattccaacagtgccgctgacctttacattaaagactatcttcatcca
tatgtcgaagcaggcaacgagcacgccagacctctcagggtatatttcaggaaccgctgg
gtaaagaccgtccacccggtggtccagcagtactgtctcatctccagcacacaggtcact
ttccaaatgcccacaagggaggacatcctcaggcaccgtgttgtcgtggtcaccctcagc
acctcccagtacctctgccagctggatttggagcctgggttgtttacccatatcctgttg
gatgaagcagctcaggccatggagtgtgaaaccatcatgccttttcctcttgctagcaag
accactcgcatcgtgctggctggggaccatatgcagctcagtccgttcgtgtacagcgag
tttgcacgggagcgtaacctgcacgtgtcactgctggatcggctgtacgagcactacccc
tctgaattcccctgccgcatcctcctgtgcgagaactaccgctcccatgaagctatcatc
aactacacatccgagctattttatgatgggaagctaatcgcaagtggaaagcagccatgc
cacaaggatttctacccgctgaccttcttcacagccagaggagaagatgtccaggagaag
aacagcactgcctactacaacaatgcagaggtgtttgagattgtggagcgggtggaagag
ctgcgtaagaagtggcctgtcgcttggggtaagctggatgaggggagcatcggggtggtg
tcaccatacgccgatcaggttttccggattcgtgctgaacttcgaaagaaaagaatgcac
gaggtcagcgttgaaagagtgctcaatgtccaaggtaaacagttccgggtgctgttcctc
agcacagtgcggacacgatatacctgcaagcacaagcagaccgccattaaacgcaaagag
cagctagtggaggattcgactgaggacctcgactacggttttctgtcaaactacaagctg
ctcaacacggccatcaccagagctcagtctttggttgcagttgtgggagaccccatagct
ctgtgctctgttggacgctgcagaaaattttgggagcacttcatttccatctgccatgaa
aactctagcctgcatggcatcaccttcgagcagatcaagggtcagctggaggctctggag
ctcaagaagacttatgtcctcaacccgttggccccagagttcattccgcgggccctgagg
ccccttcagggacaccagtcttcttcacagggccttcatccccaccatcatccacatcct
cagcatgttctgcctgcttccaacaagcagcctgcacaacatcaccaacagcagcagcag
cagtcccctccaaagggtaaacaggcaaaccacacagagcacctcccacctgatggatat
gtgcaatccaaccctgcggtgttgatggcaaatcctatccgggccttcacacctcctttg
ggtgctacaccagctggcatagggaagtcgcccagccctgtgcagcggatcgatcctcac
acaggagccagcatcctctatgtcccagctgtgtatggaggaaacatggtcatgtccatg
cctctgccattgccttggccaggttatcagaaccgttttgctgtggatcctcgcatcatg
agccaccctgcagccgtggcctacaacttaaatctgcttcaaccacagaatcgaggctct
cccatcccttatagcggtgtcacccacccctctcctttaggaatggcccaacccagcccc
gagaaggacctgcaggctgaccttgccaggaatggtaaagtagatggatgcacaaaggct
gaacagacccgtcttcagacgccagaaaggaaaaacacagatgttagggaaaaacaggga
gatttagacacaggtcaaagtcgaagtttagattcccaagcagaggggatagttggattt
cctaatgctttgcttcatcgaaaagagccttcagctacccagagatccctcaactaccac
ctggcaccacccagcccagcttttcctccacaccctgccagtggaagaaccttcccccag
cagtatcccgttcctagacttccctatcgggtcaaccagcctccacatccaggaatgccc
caacagaatcagcagcaacagctcagtcctgccttcaccggtggaagccattcttccttc
ttcagtggctccattcccactcacagatctgtgcagtcacccactgtggatgggacagag
tcttcaggggtagaggagatgagcagcacccttaggactcatatggggcacccaggggga
caacacccgggcctggcaccacacaccagggtcagcaactttggggaggatggacaggat
ggaagcatggtagacagtttagacctccagagtcccttggctttagaagctctgagccag
cagcagcaggcagcgagactgggccagtggggggaagcagcaggccctttcctccagggc
agtgttgcctttcctttaccccaacagctcgcccacctcgctcaatctggcatggctcgc
tttcctcctcaactgctccgggctgctacctgggggcttagtgccaatatggatgatgaa
gctgtttcttctgccgctgcagggccaacatgcaccaggtacccaggccttttaagagag
atgccccctcaggagcagccagaactgagggaagtaacagaattgcaacccccacctcag
tcccgcctgctccagtatcgacagtcccagtcccgtgcctctgttgacccctcatcctct
ttagctcccctttctaatcacgctggcccctttccttcaggactgtactcccatgaaact
ggtcgtaatcttctcaaccaaaacattctcaacaatcaagctctgcaacacccggagaac
cccctgtacaataccagtagctacccaaatcagccaccagctcagtccggcagccctcct
ccttcccaggtcaaatatcttctgcaagaggcccagtggtcccacagtggagctgcgtct
gcatcacagcagaaccacctcttagggaaccagagccatagccttctgtatggactgccc
atcatggctcaccccagcaggcaggagcaagtgctgatgcaacttcaccaccagcaacag
cagcagcaacatcaacaacagcaacaaaatcaaggcccagactctgagtcctaccaccca
ctgtcccctagaacatcagcagccgcagcccttcacagtgtagacgagtatgaaccgaga
ggtccgggccggcccctgtatcaacgccgcatctcctccagctacccagatgaatcatct
ccagccaacagcctcagtgcccgcccctgtcagccagaaccccaggatcatccacaaata
cagcatcaacaacacccacacggctcctacaactacccctcacatgaccacctctggccc
actaacggtgggggtccaggtccatttcagaacattccatgtaacggagccagcacgcta
gttcagcatcgtgaacttctagcctccaaagtccatcgtgagacagatgagcaggtaaag
gccgagcccgcagcagcgcagcaggcacatccacacaaccttaactcccttcagcaccag
tttcctccacttatgcccaataaaaagcagcagcagcagcctccgccaccaccgccgccg
ccaccgcaacctccaacagagcccacccagggggctccgaatttaacaaagccacctacc
atgtcttatgcgagtgccctccgagctcctcccaaaccaagggccgttcgacccgaacag
gtgaagaagaacagcgacccgctctcccttcttcaggagctgagtattgggagctcaaat
ggtagcaacggttattattcttactttaaatga
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integrated database retrieval system
