Girardinichthys multiradiatus (darkedged splitfin): 124868279
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Entry
124868279 CDS
T08099
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124868279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124868279
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124868279
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124868279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
zf_RING_Vps8
zf-UDP
WWE_5
PHD_NSD
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
124868279
NCBI-ProteinID:
XP_047221292
LinkDB
All DBs
Position
5:51125009..51157026
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AA seq
748 aa
AA seq
DB search
MATSNNMLLASAVVVWEWLNEHGRWRPYSPAVSHQIEAAIRSSDPRGGSVVLGQVDSRLS
PYIIDLQSMHQFRQDTGTIRPVRRTFYDPASAPGQGWQWEWENDTGTWTPYDMEVAIAIE
SAHSHQQTCLDLTPLGFCYLIDFKNMTQVNRQSQRCRRIQRRADMAYPLVSGPLPVSKGG
GIGGGGGLTGALLGVGVSGASMGVGSSVTSNGGLPVLGLGQPCSCQQCMLVLSVKINAGG
GAAAVQTLSRRALTMQRPKNSAVPMARPLSPSKSATLGRGLQQNYSYYQTLPHGLAITKN
TASPRRNAQLFAQSLAALTAGTSSMGISASSNRPPPPSLPPPQPPSSNQNPPSIPPKLSS
SSANESVPTATLITPASSVTTPPSPVPSPSPVVMKPQRTLSTVTMACHAPLPQRSSLAGL
SRPALQRIAMAQSRSLIASGVPTVPVKNLNGSSPVHPALAGITGILMSAAALPVCLTRPP
KLVLHPPPVSKSDIKPVPSFNHCCRKTTKKQVRKGKTPEEVVKKYLQKVKSPPEEDCTIC
MEPLGGPSGYKGPGVGPVSKAESVGRLAQCGHQYHFQCLVAMYNNGNKDGSLQCPTCKTI
YGVKTGNQPAGKMEYHVIPHSLPGHPDCKTIRIIYNIPPGIQGPEHPNPGKPFTARGFPR
HCYLPDSEKGRKVLRLLLVAWDRRLIFSVGTSSTTGESDTVIWNEVHHKTEFGSNLTGHG
FPDPGHLDNVLEELRAQGITEEDAVVEK
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggccaccagtaacaacatgctactggcctccgctgtggtagtgtgggaatggctgaac
gagcacggccggtggcggccctacagccccgccgtctcccaccagatcgaggcggccatc
cggagcagcgacccccgcggagggagcgttgtcctcggccaggtcgacagcaggctctcg
ccgtacatcatcgatctccagtccatgcaccagttcagacaggacacaggaaccatccgt
ccggtacggaggaccttttacgaccccgcctccgccccgggtcagggctggcagtgggag
tgggagaatgacacgggcacgtggacgccgtatgacatggaagtggccatcgccatcgag
agcgcccacagccaccagcagacctgcctggacctgacgccgctcgggttctgctacctc
atcgactttaagaacatgacgcaggtgaacagacagagccagaggtgccgcaggatccag
agacgtgccgacatggcctaccccctggtgtccggtccgctcccggtttccaaaggagga
ggaattggaggagggggaggcctaacgggagccttgctgggcgtcggggtgtccggagcc
agcatgggagttggaagctctgtcacctcaaacggaggcttgcccgttctgggactgggc
cagccgtgttcctgccagcagtgcatgctggttctgagcgtgaagatcaacgcaggagga
ggtgcagcagcggtacagactttgagcagacgtgctttaaccatgcagcggcccaagaac
tctgctgtccccatggccagacctctgagtccgtctaaatccgccaccctgggacgaggc
ctgcagcagaactatagctactaccagacgctgccgcacggcctcgccatcaccaaaaac
accgcctcgcccagaagaaacgctcagctgttcgcccagtcgctggcggccctcaccgct
ggcacttcctccatgggcatctcggcatcttccaacagaccgcctcctccatctctgccg
cctccgcagcccccctcctccaaccagaacccgccatccattccgcccaagctctcctca
tcctcagccaacgaatccgtaccgaccgccacattaatcacccccgccagcagcgtgacc
acgcctccctcccctgtgccgtctccgtcgcccgtggtgatgaagccgcagcgtacgctg
tcgacagtaacaatggcgtgccacgcccccttaccacagcggtccagcttggccggactg
agcaggccggcgctgcagaggatcgctatggctcagtccaggtcgctcatagcatcaggc
gttcccaccgtcccggtgaaaaacctgaacggatccagtccagtccaccccgcgctggca
ggcatcacagggatcctgatgagtgctgcggcgctgcccgtgtgcctgacccgacctccg
aagctggtgctgcaccctccacccgtcagcaagagtgacatcaaaccggtgccgagcttc
aaccactgctgcaggaagaccaccaagaagcaggtccgcaaaggcaaaaccccagaggag
gtggtgaagaagtacctgcagaaagtaaaaagtcctccagaggaggactgtaccatctgc
atggagccactggggggaccatccggatacaaaggtccgggcgtgggtccggtttccaag
gcggagtcagtgggacggctagcccagtgtggacaccagtaccacttccagtgtctggtg
gcgatgtataacaacggcaacaaggacggcagccttcagtgtcccacctgtaaaaccatc
tacggcgtgaagacaggcaaccagccagctgggaagatggagtaccacgtcatccctcac
tccctgccaggtcatcccgactgcaaaaccatccgcatcatctacaacataccgccaggg
attcagggaccagagcatccgaacccagggaagcccttcactgccagaggctttccacga
cactgctacctcccagacagcgagaaaggacgcaaggtactgagactgcttctggtggcg
tgggaccgccggctcatcttctccgtcggtacttcaagcactacaggagaatccgacacc
gtcatctggaatgaggtccaccataagacggagtttggctccaacctgacgggccacggc
ttccccgacccgggacacctcgataacgtcttagaagagctccgtgctcagggcatcaca
gaggaagatgcagtggtagaaaagtga
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