Girardinichthys multiradiatus (darkedged splitfin): 124868530
Help
Entry
124868530 CDS
T08099
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124868530 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124868530 (taf5)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124868530 (taf5)
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124868530 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
124868530 (taf5)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124868530 (taf5)
STAGA complex
124868530 (taf5)
TFTC complex
124868530 (taf5)
SAGA complex
124868530 (taf5)
SLIK complex
124868530 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_DCAF12
WD_LRWD1
PEP5_VPS11_N
LisH
CDK5RAP3
PROPPIN
eIF2A
LisH_PAC1
VPS8_N
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
124868530
NCBI-ProteinID:
XP_047221876
LinkDB
All DBs
Position
5:complement(28489452..28500875)
Genome browser
AA seq
746 aa
AA seq
DB search
MAAVQGNMVDAKDEADIKAEPVSDGFGNNHANDARLLSASPGSSAAAGNSKPAAGAPEDQ
QTLLAVLQFLRKNKLSESAEILRREAGLPEEVLDLKGGDSAGPGQGGSADTDGGDASSLL
SRVTVSTPGGAKAPTKAAGEDQPDVNVVLSAYSQQGDPALYEVYYSGLKKFIESVLDCHR
AELSQVFYPLFVHMYLELVYNNHESVAKAFFEKFSGDQECYYEEDLRVLSSLTKKAHMRG
NETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKSQID
AMSGSLPGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSTGSK
SKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKEATKRIRLAPDNLPSICFYTFLNAYQGL
TAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRKVKTAADLNLIDKESDDVLERIMDDKTA
SESKCLYGHSGPVYGISFSPDRTYLLSSSEDGTVRLWSLLTFTCLVGYKGHNYPVWDTQF
SPYGYYFVSGGHDRVARLWATDHHQPLRMFAGHLADVTCTRFHPNANYVATGSSDRTIRL
WDVLNGNCARIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLMVGELKGHTDT
IYSLRFSRDGEILASGSMDNTVRLWDAMKAFDDLETDDFTTATGHIHLQDNSQELLLGTY
MTKSTPVIHLHFTRRNLLLAAGAYNP
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacagggtaatatggtcgacgcgaaagacgaagcagatattaaagcagaa
ccggtgagcgatggcttcgggaataatcacgccaacgacgcaagactgctctccgcgtcc
cctggctccagcgctgcggctggaaacagcaaaccagcggcgggagcccccgaggaccag
cagacgctgctggctgtgctgcagttcctcagaaagaacaaactgtcagagtccgcggaa
attctgcgtcgtgaggcagggttgccggaggaggttctggatctgaaggggggtgactcc
gccggtcctgggcagggaggtagtgcggacacagacggtggggatgcgagctctttactc
agcagggtgaccgtctctacccccggcggagcaaaggcgccaacgaaagcagctggggag
gatcaaccagatgtcaatgtggtgctgtcagcctacagccagcagggagatccagctctg
tatgaagtttattacagcggtctgaagaagtttatcgagtcagttctggactgtcacaga
gcggaactgtctcaggtcttctaccctttgtttgtccacatgtacctggaactggtctac
aacaatcacgaaagcgtggccaaggccttctttgaaaagttcagtggggaccaggaatgc
tattacgaagaggacttacgtgttttgtcaagcttgacgaagaaggcgcacatgagagga
aatgaaactcttctggatttccgcaccagcaagtttgttttacgcatctcccgcgactcc
taccagctgctaaagaggcacctgcaggagcgccagaacaaccagatatggaatataatc
caagagcacctctacatcgacatcttcgatggcatgccgcgcagcaagagccagattgat
gccatgtcaggcagcttgcctggagaggccaaacgagaagcaaataaggccaaggtttac
tatggcctgctgaaggagccagaaattgagcttccccttgacgatgaggatgaggaagca
gagaatgaggagggtaaacccaagaagaaaaagcccaaaaaggacagcaccggctccaaa
agcaagaagcaggatccaaatgctccttcacagactaggatacctctaccagaactaaaa
gactcagacaagctggacaagatcatgtacatgaaggaggccaccaagagaattcgtttg
gcaccagataacctcccctccatctgcttctacacttttctcaacgcataccagggtcta
actgcagttgacgttacggatgactccagcctgattgcagggggctttgcggactctacg
gtacgggtgtggagcgtcacgccgaagaagcttcgcaaggtcaagactgcagcagacttg
aatctgattgacaaagagtcagacgatgtgcttgagaggattatggacgataagacggcc
agtgagtcaaagtgcctttatggacacagcggaccggtgtatggcattagcttcagccca
gacagaacctacctgttgtcaagttctgaagatggtaccgtcaggttgtggagccttcta
acattcacctgcctggtgggatacaaaggccacaattatccagtgtgggacacacagttc
tccccttatggatactattttgtctcagggggacacgaccgggtcgcccgcttgtgggcg
acagatcaccaccagccactgcggatgttcgccggtcacctggctgacgtcacttgcact
cgtttccaccccaacgcaaattatgtggccacaggctcgtctgaccgcaccatccgtctg
tgggacgtcctcaacggaaactgcgcccgtattttcactggtcacaagggtcccatccat
gcactggctttttctcctaatgggaagtttctggcctcaggagccactgacgggagagtc
cttttatgggacatcggtcatggactgatggttggagagctcaaaggccacacagatacc
atctattccctcagattcagcagggatggagagatcctcgcctccggttctatggacaac
acggttcgtctgtgggatgcaatgaaagcatttgatgatttagagactgatgacttcact
acagctacgggacacattcatttacaggataactcccaggagcttttgttaggcacctac
atgactaaatcgacgcctgtaatacaccttcacttcacacgcaggaacctgcttttggct
gcaggagcttataatccataa
DBGET
integrated database retrieval system
