Girardinichthys multiradiatus (darkedged splitfin): 124868571
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Entry
124868571 CDS
T08099
Symbol
si:dkey-92j12.5
Name
(RefSeq) multiple PDZ domain protein isoform X1
KO
K06095
multiple PDZ domain protein
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124868571 (si:dkey-92j12.5)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
124868571
NCBI-ProteinID:
XP_047221935
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All DBs
Position
5:complement(12982353..13069874)
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AA seq
1907 aa
AA seq
DB search
MEIMDAQCALEAVERLQAKLKERGEAPTQEKLSVLKTVLQNPLFLHILSLQQAQPKPPVK
GKGVSKSVSLNCGPCPDLPVGLKGLCHSDSYTWAVENRRSFHKDGSNSSLGSQELSFSDI
YPYNSSHMESQYCTPPRISRTMSMGRNLSAIAHERRHIEIIELINDGRGLGFGIVGGRST
GVMVKTILPGGAAGRDSRLCSGDQILHIGDTDLAGMSSEQVAQVLRNAGSRVKLLIARDV
TKPNYLSSPALNQDSLDDKDLKNDHEFSVQFIKNSRGLGFSISSYVGDLNSVYSAGVMVK
SIVKGSAADQDGHMHVGDIILSVDGVSLQGCSEQRAMEVLRRTGSLVRLRLLRKAVYPGH
IIPPVPRLQPLRHTHSFHEGNLYRSGLNKIQETGISSLREISRRAAYASRRPQHDPRDGV
KLTSEEEENLRERWQHAVGHRYEVIVCQLERFSETSGLGISLEARAGHHYLCSILPEGPI
GQSSKIFTGDEILEVNGIPLIGQTHKEVVSVLKELPVQVYLVCCRIVPPSVHDSDEEAND
DACLSLKELLAEFNDKLDHGCVIPCPTAEDITKRGVPPMSPPLAMWEKEAQVVELEKGEL
GLGFSILDYQDPEDASKTVLIIRSLVPGGVADQDGRLLPGDRLMFVNETDLEGSSLDYAV
HVLKSTEYGPVRIGVAKPLPLELCGGLTPIAERSARPSTDDTDSHTQVSLLAEAAEANFN
NTTWNSDDTIFSQQCYTENQLRYRCSAMEDDSRQQAPPLPPRTSFERTITVVRGNHSLGM
SVSAIKDGTGILVRSVVQGGSVCLDGRLGVGDIILAINGEPASNLTSAQARAMLRRHSVI
GPEMRITYVPDHQVDEHRTCLCLPPLASISTDSPSSSPTLPAPYPEPASGPARNSSPQAS
STLRLSASVKYKTTAPDPPTVRATVSFKAFKGPASDTSWQLPKYLQIPPNSKEKEKDGDT
VRKSRDKTNEDVRVKNPEVKIKVDGKEENNEELCSHVAWSWDQPKSVQLTRAPSQSLGIS
IMGGRGMGRRLSSGEMMRGVFIKHISPDSPAALNGTLRVGDRILEVSGVDLRDASHEQAV
EAIRRAGDTVVLLIQSGLNRAQSPNPINHERLSTTSLSNSHNNKEAETLSSLFLSLSPAN
PFTPTPFKASSPTSDRMDRRSPVNVTTAASAAVEDGDDTSRKKMLQRYGSLSGKLHMIEL
EKDPAAHGLGIRLAGNEEGSRARMCVYVEGIDPGGPAALDGRIQVGDELLEINGQILYGR
SHQNASTIINNAPSKVKIILIRNKAGQMLRRIKRECEDTVDSKTDAAEGESHGIEHIILP
QDYAGLGLCLGEDHSKRGVVIRSLIQHGTASKDGRIKVGDRVVAVGDEPVAGLSVEKVSS
LILKHQVTVKLSISSSKALPFSLPHLPYPPAASSEPPQDSPSSSTSLGTVQTPPAESSYW
PDSTPSTSDPWSCPVVAGRETTIEICKGNLGLGLSIVGGCDTLLGAVIIHEVNDGGAAQR
DGRLQGGDQILEVNDIDLRQATHDEAIAVLRLTTQRVRLCVFRHQEAYREEDLWDVFSLE
LTPCPIEGLGFTTVGKSDDTGIFVSEIIRGGTAESDGSLLQGDQILSINGEDVRAASQEH
AQRRLQECTGAVLLEVARFKAGLQYSQRSKEYFQLCFIQSEVSDSSTLTSKSGCGASSCQ
QREMDNRTGSSQPELRKVTIQKGPRDTLGVSLAGGVGSPHGNVPLFIASMDTNGLAAKSN
KLETGDRIRSINDVSTEGITHDSAEALLKNATGTISLQVITGFDGCSSQVPSEVHVSSSD
LASSCSHNNFCLLFDPYSPRVYKTVTLERGLLGLGFSIVGGFGSPHGDLPIYVKSIFSKG
AAVEDGRLKSGDQIIAVNGHCLEGVTHAKAVEILKKAKGTVILTVLS
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atggagattatggatgctcagtgtgccttggaagctgtggaaagactgcaagccaaactg
aaggagcgaggggaggctcccactcaggagaaactatccgtgctgaagactgtcctgcag
aaccctcttttcctgcacatactcagcttgcagcaagctcagccaaagcctccggtgaag
gggaaaggagtttccaagtcggtatccctgaactgtggcccatgcccagacttacctgtt
ggcctgaagggactctgccatagtgactcatacacctgggctgtggagaatcgaagatca
tttcataaggatggcagcaactcctcccttggctcacaggagctgtccttttcagatatc
tacccatacaactcttctcacatggaatcacagtactgcactcctcctcgtatctcccgc
accatgtcgatgggtagaaacctttctgctattgcacatgagaggcgtcacattgagata
atagagttgatcaacgatgggagaggacttggttttggcattgtaggcggacgcagcaca
ggagtcatggtcaagaccatccttcctggaggtgcagcaggaagggacagtcgcctgtgt
agcggagatcagattctacatattggagatacagacttagcgggcatgagcagtgaacaa
gtcgcacaggtgctgcgaaatgctggcagtagggtgaaactccttattgccagggatgtt
accaaacccaattacctctcctcccctgctctgaaccaggacagtttggacgataaggac
ttgaaaaatgaccatgagttcagtgtccagttcattaaaaatagccggggcctgggattt
tccatctcaagctatgtaggagacctgaactcagtctacagtgccggtgtgatggtgaag
agcattgtaaaaggcagtgctgcagatcaagacggacatatgcacgttggagatatcatc
ctttctgtggatggtgtgagccttcagggctgcagtgaacagcgtgccatggaggtgctc
aggaggaccggttccctggtcagactgaggttgctgagaaaggctgtctaccctggtcac
atcattcccccagttcctcgcctgcagcctctccgacacacccacagcttccatgaaggc
aacctttacagatcaggcctcaacaagattcaagagacaggaatcagctctctgcgtgaa
atctcccggcgagcggcatatgccagcagacgaccccaacatgatcccagagatggtgtg
aaactgacttcagaagaagaagaaaacctgagggagaggtggcagcatgcggttggacac
cgatatgaagtgattgtctgtcagctggagaggttcagtgagacaagtggtctaggcatc
agtctggaagctcgggcaggacatcactatctgtgctccatcttaccagagggacccatt
ggccaaagcagcaaaatctttactggagatgagatactggaagtaaatggaatccccctt
attggacagacacataaggaggtggtcagtgttctgaaagaactgccagtgcaagtatac
ctcgtgtgctgccgcattgtccccccttcagttcatgacagtgatgaagaagcaaatgat
gatgcctgtctcagtctcaaagagctgctggctgagttcaatgacaagctggatcacggc
tgtgtcattccctgtcctacagctgaggacattacaaagcgtggcgtgccccccatgtca
cctcctctggccatgtgggaaaaagaggctcaggttgttgagctggaaaaaggagagttg
ggacttggcttcagcatcctggactaccaggatccagaggatgcctccaaaacagttcta
ataatccggtccttggttcctggaggtgtagcagatcaagatggccgcctgctacctggt
gaccgactaatgtttgttaatgaaactgacctagagggctccagcctggattatgctgtg
catgtgctcaagtctacagaatatgggcctgttcgcattggtgttgctaaaccactgccg
ctggaactgtgtggtggcttgacgcccatagcagagcgaagtgcgcggccttcaaccgat
gacactgacagccacactcaagtcagcctgctagctgaggcagctgaggccaatttcaac
aacacaacttggaactccgacgataccatcttcagccagcagtgttacacggagaaccag
ctgcgttatcgctgcagcgctatggaagatgacagtaggcagcaagccccacctctgccc
cctcgcacaagctttgagaggacaatcactgttgtcaggggaaaccatagccttgggatg
tcggtgagtgctatcaaggacggcacaggcattctggtccggagcgtggtccaagggggc
tctgtttgcctcgatggcagactgggggtgggggatatcatcttggccataaacggagaa
cctgcctcaaatctgaccagcgcccaagccagggctatgcttcgcagacactctgtcata
ggtccagagatgaggataacctatgttccagatcatcaggtggatgagcaccgaacttgt
ctgtgtttgccccctctggcgtccatctcaacagacagtccatcttcttcgcccaccctg
cctgctccgtatccagagcctgcatcaggaccagccagaaactccagtccccaggcttca
tcaacgctcagattgtctgcctccgtcaaatacaaaacaacagctccagatccgcccacg
gtcagggccactgtttcgtttaaagcatttaaaggcccagcctcagacacaagttggcag
cttccaaaatatctccaaatacctccaaatagcaaagagaaggaaaaagatggagacact
gtaaggaagagcagagacaaaactaatgaagatgtgagagtgaaaaatcctgaagtcaaa
ataaaggttgatggtaaagaagagaacaatgaagagctttgttcacatgtagcctggtct
tgggatcagcctaaaagtgtgcagctgactcgagcaccgagccagtcccttggtatcagt
attatgggaggcagaggcatgggccgcagactgagcagtggagagatgatgaggggtgtc
ttcatcaagcacatcagccctgacagccctgcagcgcttaatggcacccttagggttgga
gacaggatattggaggtgagtggtgtggacctgagagatgccagccatgagcaggcagtg
gaagccatccgcagggcaggagacactgtggtccttttgattcagtctggactaaacaga
gctcagtctcccaatcccatcaatcacgaaagactatcaacgacatcgctgtccaactct
cataacaacaaggaggcagagactctcagcagtctgttccttagtctctcccctgcaaat
cccttcactcccaccccctttaaggcctcgtcaccaacatccgatagaatggatcggaga
agccccgtaaatgtcacaacagcggccagtgcagcagttgaagacggagacgacaccagc
aggaagaagatgcttcagcgctatggcagcctgtcaggaaagctccacatgattgagctg
gagaaggaccctgcagctcacggtttgggaattagactcgcaggcaacgaggaaggctcc
agagcgcggatgtgtgtctatgtggaaggaatagacccgggtgggcctgctgctttggat
gggagaatacaggttggggatgagctgctggagataaatggtcagatcttgtatggtcga
agtcaccaaaatgcctccaccatcatcaacaatgccccctctaaagtgaagatcattctc
atccgaaataaagcaggtcaaatgctgaggagaatcaagagagagtgtgaggacacagtg
gactctaagacggatgctgcagagggcgaatcacatggcatcgaacatatcatcctaccc
caggactatgcaggtctgggcctttgccttggtgaggaccattccaaaagaggggtggtt
atcaggtccctgatccagcacggcactgccagtaaggacggcaggataaaagttggagac
agagtcgtagcagtgggtgatgaacctgtagctggactgtcagtggagaaggtgtccagt
ttgattctcaaacaccaggtcactgtcaagctctccatcagcagttccaaggctctccct
ttctcacttccccatctcccttaccctcctgctgcttcatctgaaccccctcaggactct
ccatcttcttctacatctctcggtacagtgcagacccctccagcagagagctcttattgg
ccagattcaactccttcaacttcggacccctggagctgtccagttgtagctgggagggaa
actaccatagaaatttgtaaaggaaatttaggcctgggcctcagcattgtgggaggatgt
gacaccctcctgggggcagtaataatccatgaagtgaatgatggcggagcagcacagaga
gatggaagactgcagggtggagaccaaatattagaggtgaatgacatagacctgcggcag
gccacacatgacgaggcaattgcagtgctgcggctcaccacccagcgagttcggctgtgt
gtcttcaggcaccaggaggcctaccgggaggaggacctgtgggatgtcttcagtctggag
ctcacgccttgtcccattgaaggcctagggttcaccaccgtggggaagagcgatgacacg
ggcatctttgtgtcagaaatcatcagaggtggcactgcagaatcagatggcagcttgctg
caaggtgaccagattctgtcaatcaacggggaggatgtccgtgcagcatcgcaggagcat
gcacagaggcgtttacaggagtgcactggagctgtccttctagaagtagctcgttttaaa
gctgggttgcagtactcccagaggagtaaggaatattttcagttgtgttttatccagagc
gaagtctctgacagctccactctgacaagcaaaagtggatgtggtgcatcttcttgccaa
cagagggagatggataacagaacagggagcagccaacctgagctcagaaaagtaacaata
caaaagggtccacgtgacacgctgggtgtcagtttagctggaggagtgggtagtccccat
ggcaacgtacctctttttattgcttctatggataccaatggactggctgccaaatcaaac
aaattagagacaggtgacaggatccgtagcatcaacgatgtgtccacagagggaattact
catgacagtgctgaagccctgctgaagaacgcaaccggaaccatcagtttgcaggtaata
accggttttgatgggtgtagctcacaggttcccagtgaggttcatgtcagctcatcagat
ctagccagcagctgctctcataataacttctgtctgctctttgatccctatagtccacgt
gtttataagactgtcactctggagagaggcttgttgggcctgggcttcagcattgtggga
ggctttggcagccctcacggagaccttccaatctacgtcaaaagtattttcagcaagggg
gcagctgttgaggacggcaggctgaaaagtggcgatcaaatcatcgctgtgaatggacac
tgcctggaaggcgtgactcacgcaaaagctgtggaaatcctgaaaaaagcaaaaggaact
gtaatccttactgtactctcatga
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