Girardinichthys multiradiatus (darkedged splitfin): 124868683
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Entry
124868683 CDS
T08099
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
gmu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124868683 (col9a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124868683 (col9a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124868683 (col9a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gmu00535
]
124868683 (col9a3)
Proteoglycans [BR:
gmu00535
]
Extracellular matrix (ECM) proteoglycans
Others
124868683 (col9a3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
124868683
NCBI-ProteinID:
XP_047222147
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Position
1:34663017..34681565
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AA seq
678 aa
AA seq
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MTGFSALSVLVLCQLLSSSSAQRPGLRGPPGPQGPPGQPGRDGTDGKPGPPGLPGKAGPK
GKAGISGLPGKPGLPGLPGIDGLTGPDGPAGRDGPPGEAGEAGPSGPPGPPGRGRPGTPG
LPGTNGLPGGVGPQGSAGPEGLPGLPGPPGPDGPPGLPGTLQDLTGDLLCPAICPPGPPG
PPGMPGFKGHTGHKGDKGEPGKDGEKGDPGPPGPPGIAGTVGLQGPRGLRGLQGSMGSAG
DRGLPGFRGKPGIAGIIGKTGDVGEKGPQGFKGPKGEIGKIGPKGALGGAGPKGEPGIPG
RDGKDGAPGLDGEKGDPGRHGVVGEKGPNGLPGLPGKAGAKGSKGQVGDPGKSGEQGPSG
EPGIPGEIGVPGNRGIAGPRGVAGGIGPAGNSGPHGVKGFQGVKGALGDPGLPGPTGLRG
EFGERGPVGASGPKGDIGVAGSDGLPGENGEPGPFGPVGQKGESGKRGELGPKGVTGPEG
EIGARGPPGKQGPMGFQGEQGQPGIAGKTGVPGKLASEQHIRELCGSMIDDQIAQLAANL
RRPLAPGMVGRPGPAGSPGKPGVAGSVGHPGTRGPPGYRGLPGELGDPGPRGDVGEAGDK
GPVGKTIDGPPGDQGYQGLPGVPGIVKDGRDGSPGDPGEPGEPGRAGRTGHQGPPGICDT
SACQGTSPAGKSSNPKNN
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgacagggttctctgctctttcggtgctcgttctgtgccagcttctgtcatcatcctca
gcccagagacctggactcagaggaccccctgggccacaaggacccccaggacaaccagga
agggatggcactgatgggaaacctggacctcctgggctgccagggaaagctggccctaag
ggtaaagcaggaatatcaggactgccaggaaaaccaggtttgccaggacttccaggaatt
gatggtttgactggtcctgatggtcctgctggcagagatggaccgccaggggaagcaggt
gaagctggaccttcggggccacctggacctcctggcagggggagaccaggaaccccagga
ttaccaggaaccaatgggctgccgggcggagtcgggcctcagggatcagcaggtccagag
ggtcttccaggacttccaggacctcctggccctgatggacccccagggcttcctggtacc
cttcaagatcttactggtgatctcctgtgtcctgctatctgccctcccggtccccccggc
ccacctgggatgccaggatttaagggacacactggacacaaaggagacaaaggagagcct
ggaaaagacggagagaagggggaccctggtccaccgggaccaccgggtattgcaggaact
gttggtcttcaggggccacgtggtctgagaggtctacaaggctcaatgggatctgcaggg
gacagaggcctcccaggtttcagaggcaagcctggcatagctggaatcattggaaagaca
ggcgatgttggggaaaagggaccacagggatttaagggacctaaaggagaaattggcaaa
attggtcccaaaggagctctggggggagcaggacccaaaggggagcctggtatacctgga
agagatgggaaagatggagcaccagggctggatggcgagaagggtgatcctggacgtcat
ggagtagttggtgagaaaggaccaaatggacttcctggtttgcctggaaaagctggagca
aaggggtcaaaaggacaagttggtgatccagggaagtctggggagcaaggaccctctgga
gagccaggtattcctggtgaaattggcgttccaggaaacagggggatagcaggtcccaga
ggcgtggctggaggtattggaccagcaggcaattctgggcctcatggagttaaaggcttc
cagggagtcaaaggagccttgggcgacccaggtcttccagggccaacgggactccgagga
gagtttggtgaaagaggtccagttggagcttctggaccaaagggagacataggcgtggca
ggaagtgatggtttaccaggagagaatggagagcctggtccatttgggccagttggacaa
aaaggagagtcaggaaagagaggtgaactggggcccaaaggtgtaacgggtccagaaggc
gagattggggcaagaggacctccaggaaaacaaggaccaatgggcttccaaggggaacag
ggtcagccaggaatcgcaggaaagacaggtgtacctggaaaattggcaagtgagcagcac
atcagagagctgtgtggttccatgattgatgaccagatagcacagctagcagccaacctg
cgaagacccctggcacctggaatggtgggccgccccggccctgcaggttctccaggaaag
ccgggggttgctggttctgttgggcatccaggtactcgtggaccaccaggatacagaggt
ctgccaggagaacttggagatccaggtcccagaggtgatgttggtgaggccggtgataag
ggacctgttggcaaaaccattgatggacctccaggggaccaaggataccaaggtcttcct
ggagtacctggaattgtcaaagatggccgtgatgggtctccaggagatccgggtgagccc
ggagagcctggcagggcaggcaggacagggcatcagggtcctccagggatctgtgataca
tcagcctgccagggaacgtcaccggctgggaaatcctcaaaccccaaaaacaattaa
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