Girardinichthys multiradiatus (darkedged splitfin): 124868829
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Entry
124868829 CDS
T08099
Symbol
tnrc6c2
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124868829 (tnrc6c2)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124868829 (tnrc6c2)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124868829 (tnrc6c2)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124868829 (tnrc6c2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
Mei5_like
THOC7
Motif
Other DBs
NCBI-GeneID:
124868829
NCBI-ProteinID:
XP_047222396
LinkDB
All DBs
Position
5:9847720..9909939
Genome browser
AA seq
1910 aa
AA seq
DB search
MEEKRKKKQEEKTKKDISQKKKPKVPEPVPTKPSPGSSHHLQPSSHTLPLSSFSSSGNGN
APPCGRQVLTLTTPSQQQCQSSSASARYLPREVPPRFRQQEHKQLLKRGQPLPAEALSSI
SLLPSSPSSSPSSYLSFSSSTCSTTPNSATSATGKHNPDTSLLSGSGAQYDKSHWGASGP
VNRPSSANSWDKVIIDGSDPEAWPSIERNIDSGQPANPECSLGSVSSNLDTSAVASTSRS
GLLSMATGATGQQAHYNSLKPNNNMMTGPVSASTLAASRGWGSDVKQDGMNGGRVAAPSN
WGSPNFNLNLNPNANPSAWPVLGHEGGAGGVNGPSSTSLPPSMNGNGNLGNGNSDNGGGS
WVSMISANDNDQQHLSTNKNASFNMEPANLNTDGPNYTKQQQAQEPMSPIHGLTGWGGHS
PTESSQLSGDTTGSSVWGGGENKANESPKDSGWDSSPSGGLSAWGRQGSGGGGGGSSGSG
GWGDWGKSSGGGDVPKCWNSVDAGSSGPGQEQQMSSWGKQSGTAPASEDSGDSSEGRSRC
RDRSSSMDFAPLLPQQDLDPRVLSNSGWGQTPIRQHTVWEMEEANSDDGKSNSSSDTMGC
SSSNGGLSSTNGGAINPNIGPSQRPGSGGKMDSERSSSSGWGAPPPQSIQTGSGWGDPPL
SVNKAPNGTACGWGDPLPTSGSKNEGTSSWDSDKSSRWDDGMMKNKSSNWGESPKNSQGW
GNSNGGSNGSTTGDWGVPDLKKNGSSSSMWDGEDGNRETSGWNESPRGGSRGGGSWGKST
PAVSNSNWGETPRASGPVQGGWGSSKPQESSSSGSSTGSGGCVSIGSWGGPCSVKPTNSG
WGNVGKQEPGMEPTGWEEPSPPSIRRKMEIDDGTSTWGDPSAYSKTVNMWDRNNPNNNPG
NGGPPPSKNGAITMINNNNNHSHHMHHHSHHGQPPSHMLHQGNNNGSPNSAASHPTGGPQ
GRPPLANPGWGEIPSVQPKSEPAWGEPAAPTSTVDNGTSAWGKPSGGVGGWRDGGHDPSG
PYVRSNGPTGSAPCKSGPKPMQDGWGNGEEMSMSTSQWDTEDGDVWNSPTSQDSGSSCNS
WGNGPKKCPSKGKLCSKQDEAWIMNRLIKQLTDMGFPRDPAEEALKSNNMNLDQAMTALL
EKKTDMDKRSLGMSDYSNGMNKTLVCRPSALSKDPSDRNTFLDKDGVLSDDAPPSPFLPS
PSLKLPLPNSSLPGQGLGQGNLGLAMQNLNNRQIPNGMFGSNGAAQTRAMQQQPPQPPVP
PLSSSQPNLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQQMTLLYQLQQLQM
AYQRLQIQQQMMQAQRNVSGPIRQQEQQVARTITNMQQQIQQHQRQLYQALLMKQQQLPS
HSSSSSSSAGLHHPPGGPAGVTGSGKSTLDPFAGPHQASGLADTLHTKEPPSSPNAYSTY
SLSGLNPNMNVNGMDVGGLSLKEPPQPQSRLSQWTHTNSMDNLSGNSSNLENNFNNKHGA
ISAASTLGPPGKTPQLEDSYSPYNLISNSESPSSPLVPPDNWGQGKSPNEKISNGANINW
PPEFCPGVPWKGLQNIDPENDPNMTPGSVPSGPTINTNIHDVNRYLLRDRNGATSPASAL
GSGSLPPTSSDWKISDYCSSFSLLSCDGDSSGKLSEMKSTWSPGPIAQSQASLSHELWKV
PQGPRSTTAPSRPPPGLTNTKPSSTWGGSSLGLAQGWSGSYSSEGTTWSTDSSNRTSSWL
VLRNLTPQIDGSTLRTLCMQHGPLITFHLNLTQGNAVVRYNSKDEAAKAQKSLHMCVLGN
TTILAEFAGEEDVNRFFAQGQSLGANTTSWHANPGSNQNRMGGATQPHSVGQWSSSGGGG
KASGSDLLWGGVPQYSSLWGPPNREDARVIGSPTAINTLLPGDLLSGESM
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagagaaagaaaaaacaagaagaaaagactaagaaggacatctctcagaaa
aagaaacccaaagtgccagagcctgtccccactaagcccagtcctggttcatctcaccac
ctccaaccctccagccacacgctgcccctctcctccttctcttcttctggcaatggcaac
gcccccccatgtggtaggcaggtcctgactctgactactccctctcagcagcagtgccag
tcgtcctctgccagtgcccgctacctgcccagagaggttcctccgcgcttccgtcagcag
gagcacaaacagctactgaagagaggccagcccctgcccgcagaagcactcagctcaatc
agccttcttccttcctctccctcctcttcaccatcatcgtatttgtccttttcttcttcg
acttgcagcactaccccaaactctgccacgtctgctacaggcaaacacaacccagacaca
tccctactgagtggttctggtgcccagtatgataagtcgcattggggagcctctggacct
gttaacagaccttccagtgccaacagctgggacaaagtgatcattgacggaagtgatcca
gaagcttggccatccattgaacgtaatatagactctggtcagccggcaaatccagaatgc
tccttgggctcagttagctctaacttggacaccagtgctgtcgcttctacaagtaggagt
ggtcttctgagtatggccacaggtgccactggccagcaggcccattataactctctcaaa
ccaaacaataacatgatgacgggacctgtttcagccagcacgttagcggctagtagaggc
tggggttcagatgtgaaacaagatggcatgaatggtggtagagtagcagcccccagtaac
tggggatcgcctaattttaacttgaacctcaaccccaatgccaacccatcggcctggcct
gtcctgggacatgaaggtggtgcgggaggtgttaatggccccagctctacgtccctccca
ccaagcatgaacggaaatggaaatctgggaaacgggaattcggacaatggtggggggagt
tgggtcagcatgataagtgctaatgacaatgatcagcagcacctttcaaccaacaaaaat
gcatctttcaatatggagcctgctaaccttaacactgatggaccaaactacactaaacaa
caacaagctcaggagcctatgagccccatccacggtttaactggctgggggggtcattcc
cccactgaatcttcccagctcagtggggacacaacaggcagctctgtgtggggtggagga
gaaaacaaggcaaatgagtcccccaaagactcaggatgggactcatctccttctggaggc
ctttctgcctggggccgccaaggcagtggtggtggtggtggtgggagtagtggcagtggt
ggctggggagactggggaaagtcttccgggggtggagatgtacccaaatgctggaactca
gtggatgctggtagttctggtccaggccaagagcagcaaatgagttcatggggcaaacaa
tcaggaacggctccagctagcgaggatagcggagacagcagcgaagggcgatcccgatgc
agagacagatcctccagcatggattttgcccctctgcttccccagcaggacctagacccc
cgggtgctgagtaattcaggatggggacaaacccccattcgacagcacactgtatgggag
atggaagaagctaattctgatgatggaaagagcaatagcagctcagacaccatgggatgc
tctagctctaatggtggactgtcatcaaccaatggaggtgctattaacccaaacattggg
cccagccagaggcctggatctggaggaaaaatggacagtgaaagatcatcctcctctggt
tggggcgctcctccaccgcagtcaattcaaactggatcaggatggggggaccccccactt
tcagtaaacaaagccccaaatggcacggcttgtggctggggagaccccttacctaccagt
ggttctaaaaatgaaggcacctcatcctgggattctgataagtcatctcgctgggatgat
ggcatgatgaaaaacaagtctagcaactggggagaaagccccaaaaattcccaaggctgg
ggcaacagtaatggggggtccaatggttccaccacaggggactggggagtgccagacctc
aagaaaaatggttcttctagcagcatgtgggacggagaagatggtaatagagaaaccagt
ggatggaatgaaagcccaagaggaggaagcagaggaggtgggagctgggggaaatctacc
cctgctgtgagcaacagtaattggggagagaccccacgtgccagtggcccagtgcaggga
ggctggggctcttccaagccccaggaaagcagcagcagcggcagcagcactggcagtgga
ggatgtgtcagcattggttcctggggtggtccttgctctgtgaagccaaccaactctggc
tggggaaatgttggcaaacaggagccaggcatggagcccactggttgggaggagccctcc
cctccctccatccgacgaaagatggagatcgatgatgggacatcaacttggggtgatccc
agcgcctacagcaagaccgtcaacatgtgggatcgcaacaatccaaataacaacccaggc
aacggtggcccaccacccagcaagaatggtgcaataactatgatcaataataacaacaat
cactctcaccacatgcaccaccattcccaccatggccagcctccaagtcacatgctgcac
caaggaaacaacaatgggtcaccaaacagtgctgcctcacatcccaccgggggaccccag
ggtagacctccacttgccaatccgggttggggagagattcccagtgtccagccaaaatca
gagcctgcgtggggagagccagcagctccaacttcaactgttgacaatggtacatctgct
tgggggaaaccctcaggcggtgttggaggatggagagacggtggccatgacccatctggc
ccttatgtaaggtcaaatggacccacaggttccgcaccttgcaagtcaggccccaaacct
atgcaagatggctggggaaatggagaagaaatgagcatgtccaccagccaatgggacact
gaggatggggatgtctggaacagtcccacatcacaagacagtggctcctcctgtaactcc
tggggcaacggacccaaaaagtgtccaagcaaggggaagctctgcagcaagcaagatgag
gcttggatcatgaaccgtctcattaaacagctcactgacatgggctttccgagagaccct
gctgaggaggccttgaagagcaacaacatgaaccttgatcaagccatgactgccctcttg
gagaagaagacagacatggacaagcgaagcctgggcatgtccgattacagcaatggcatg
aacaagactctagtgtgtcggccctctgcgctctccaaagacccttccgaccgcaacaca
tttcttgacaaggatggcgtcctgtcagatgacgctcctccatcaccatttttgccttcc
cccagcctgaagctccccctgcccaacagtagccttcctgggcagggtttgggacaaggc
aatctggggctggccatgcaaaacttgaacaacagacagatacccaatggaatgtttggc
agtaatggagcagcacaaacccgggccatgcagcagcagcctcctcagccaccagtgcca
cctctcagctcctcccagcctaatctacgtgctcaagtgcctcagtttctctcccctcag
gtccaagcacaactcttgcagtttgcagcaaaaaacattggtcttaaccctgcactttta
acctcaccaataaaccctcaacaaatgaccctgttgtaccaacttcagcaactacaaatg
gcgtaccagcgtttacaaatccagcagcagatgatgcaggcgcaacgcaatgtttccggc
cccattaggcaacaggagcagcaagttgcacgtacaatcaccaacatgcagcagcagatc
cagcagcaccagcgtcagctctatcaggcgctgctgatgaagcagcagcagcttccttcg
cattcctcctcatcctcttcctccgctggtctgcaccacccccctggtggccctgccgga
gttactggctctggaaaatcaaccctggacccttttgcaggcccacaccaggcttcgggc
cttgctgacacactgcacaccaaagagcctccgtcttcgcccaatgcctacagcacctac
tctctttctggactgaatccaaacatgaatgtaaatggcatggacgttgggggtctgtcc
ctgaaggagcccccccagccccagtctcgcttgtcccagtggacacacactaactcaatg
gacaacctctctggcaactcttcaaatttggagaataacttcaataataagcatggtgcc
atatctgctgcctctaccctcggaccccctgggaagaccccccaactcgaggactcatac
agcccttacaatctaatctctaactccgagtccccgagcagtcccctggtacctcctgac
aactggggccaaggcaagagccccaatgaaaagatctcaaatggggccaacattaactgg
cctccagagttctgcccaggcgtgccatggaagggccttcagaacattgaccctgagaat
gacccgaacatgacccctggcagcgtccccagcggtcccaccatcaacaccaacatccac
gatgtcaaccgatacctcttgcgggacaggaatggagccacttccccagcttctgcacta
ggaagtggctctctgcctcccaccagcagtgactggaaaatcagtgactattgtagctct
ttcagcctgttgtcctgtgatggggacagctcaggtaaactatctgaaatgaagtccacc
tggtctccagggcccattgctcagagccaagcctccctgtcccacgagttgtggaaagtc
ccccaggggccgcgcagtaccaccgctccgtcccggcccccacccggcctcaccaacacc
aaaccctcctccacctggggtggcagctctttggggctggctcaaggctggagcggctcc
tactcttctgagggaaccacatggagcaccgacagctccaacaggaccagcagctggctg
gtgctgaggaatctcaccccacagattgatggctcaactctgaggaccctgtgtatgcag
cacggccccctgattacattccatctcaacctgactcaggggaatgctgtggtgcgctac
aactccaaggatgaagctgccaaggcccagaagtccctgcacatgtgcgtgcttggaaac
accaccatcctggcagagttcgccggggaggaggacgtcaaccgcttctttgcacaaggt
cagtcgctgggagcaaacaccacgagctggcatgccaacccaggaagcaatcaaaatcgg
atgggcggggcaacccagccccactcagttggccagtggagcagcagcgggggtgggggc
aaggccagtgggagcgatctgctgtggggaggagtgccccagtactccagcctgtggggg
ccacccaacagggaggacgcccgtgtgattgggagccccaccgcgatcaacaccctgctg
cctggtgatttgctgagcggggagtccatgtag
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integrated database retrieval system
