Girardinichthys multiradiatus (darkedged splitfin): 124868867
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Entry
124868867 CDS
T08099
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmu03041
]
124868867
Enzymes [BR:
gmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124868867
Spliceosome [BR:
gmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124868867
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
124868867
NCBI-ProteinID:
XP_047222447
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All DBs
Position
5:7947462..7954464
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDEEPQGLPESGTPANKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLAIKKDEDVLKKNCPHIVVGTPGRTLALIR
NKTLSVKNIKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVNRCV
ALSQLLVEQNFPAIAIHRGMTQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatgacgttgataatgaacttctggactacgaggaggacgaggagccccag
ggactcccagagagcggtacccctgccaacaagaaggaggtgaaagggtcctatgtatcc
atccacagctcgggattcagagactttctcctcaaaccagagctgctccgcgccattgtt
gactgtggttttgaacatccttcagaagttcaacatgagtgtattccccaagctatcctt
ggcatggatattctgtgtcaggccaagtctggtatgggaaaaacggctgtgtttgtgtta
gccacgctgcagcaaattgaacctgtggatggccaggtgtctgttcttgtgatgtgccac
acacgtgaactggccttccagattagcaaagagtacgagcgcttctccaagtacatgccc
agtgtcaaggtgtctgtgttcttcggcggcctggctatcaagaaggacgaagatgtcttg
aagaagaactgccctcacattgttgtaggaacccccggccgcacactggccctcattcgt
aacaagactctcagtgtgaagaacatcaaacactttgtgcttgatgagtgcgataagatg
ctggagcagctggacatgaggcgggacgtgcaggaaatctttagactgacgcctcacgag
aagcaagttatgatgttcagtgcaacactaagcaaggagatccgtccagtctgccgcaag
ttcatgcaggatcccatggaggtgtttgtggacgatgagaccaaactgactctgcacggc
ttacagcagtattactgcaagctgaaggacagcgagaagaacagaaagctgtttgacctt
ctggatgtactcgagtttaatcaggtggtgatctttgtcaagtctgtgaatcgttgtgtt
gccctgtcccagctgctggtggagcagaacttccctgctatagccatccacagggggatg
acacaggaggagagattatcccggtaccagcagtttaaagacttccagaggcggatcttg
gtggccaccaacctgttcggccgaggcatggacatcgagagagtcaacattgtcttcaac
tacgacatgcctgaggattctgatacataccttcacagagtggcccgggcaggcaggttt
ggaaccaaaggcctggccattacctttgtttcagatgaagccgacgccaagaccctgaat
gaagtccaagaccgctttgaggtcaatgtagctgagctacctgatgagatcgacatctcc
tcctacattgaacagtccagatga
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