Girardinichthys multiradiatus (darkedged splitfin): 124868919
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Entry
124868919 CDS
T08099
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124868919 (lrba)
Membrane trafficking [BR:
gmu04131
]
Endosome - Lysosome transport
Others
Others
124868919 (lrba)
Endosome - Golgi transport
124868919 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
124868919 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
SUKH_6
EIF3I
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
124868919
NCBI-ProteinID:
XP_047222517
LinkDB
All DBs
Position
5:45132521..45388486
Genome browser
AA seq
2940 aa
AA seq
DB search
MASAEAAAGAARPGDGKDGPPGAMQLNPAVPIRGIRMKFAVLAGLVEVGEVSNRDIVETV
FNLLVGGQFDLEMNFIIQEPESIVCMVELLDKCEPTCQAEIWSIFTAILKKSVRNLQACT
EVGLIQQVLHRISTTDSMIADLLVDMLGVLASYSITVKELKLFFSKLQGEKGQWPRHAVK
LLSVLKYMAHRNGPDSFFSFPGKNAAAIALPPIARWPYQNGFTFHTWIRMDPLNNINVDK
DKPYLYCFRTSKGMGYSAHFVGSCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTLVHVYN
RWKNSEISCFVNGELASFGDIAWFVNTSDTFDKCFLGSSETADVNRVFCGQMGAVYLFGE
ALSAAQILAIYQLGPGYQGTFKYKAESDLLFAEHHKTLLYDGKLSSSISFTYNPCATDAQ
LCLESSPKDNASIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGMQVLFPLFAQLDYCRPS
SQEPDTSVCCTLLSFMMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKMHVTRPVLDIVL
AFSRYLSNLQNGIYLLKQLCDHIMFNPAIWIHAPAKVQLMLYTYLATEFISTVTIYNAVR
RVGTVLQIMHTLKYYYWVVNPHNCSGVIPKGVDGPRPNQKEILSLRAFLLLFIKQLIMKD
HGVKEDELQSILNYLLTMHEDENLIDVLQLLVALMSEHPGTMVQAFDQRNGIRVLYKLLA
SKNEGIRVQALKVMGYFLKSLPPKRKSEVMLTHGLFSLLTERLMLHSNPFTMTTYNSLFE
ILTEQICTQVIHKQHPDPDSNVKIVNPQILKVIAALLKNSPQSPETMEVRRIFLSDMIKL
FNNNRENRRSLLQCSVWQEWMLSLCFVNPQNNEEQKITEMVYAIFRILLYHAIKYEWGGW
RVWVDTLSITHSKVTFEQHKQSLSRMFRQYQKQGSTSSRNTIRTISGVSQSSEDMKSVNG
PPAEETAPSTVIELAVDEESQKSVDTASSSIITSTPMEAVEDGDHPFITVSNILASTEEE
QKVERSSGNQSNVDKETGATVMHKAEEQEEVTEPASEKSNDDPERVESAHSEAAGAKTEE
AVEDSVPQTDDDAETLETNKEKCDISKSSAEESTVVSEKQDETKQMSPEPSGSLENSVLG
GASVFNEDLVDVSSISDQINPSDTDDSQEESSYASAATGEAGELDKKEEDKHEGDGSKMK
DLQQQETQMEEDKEEMKKVRKEEKGESELVENQVPCLESQTPQTETGDQSVKEPTKENVS
DPQSSSKTEGTATDQQAPDVVPLPSVQEAPAAPEPPSQSQTSEPSEATAEEILPGASESS
TAGSSSNTSSKSSDAVTRTKEIKIARLDVANVAMDTEKLELKETSSTESSQGQTATPAAG
EAGSPSDRPEDGSTSTPRSTMFRIPEFRWSHMHQRLLTDLLFSIETDVQAWRSHSTKTIL
DFVNSSENVVFVHNSIHLISQVVDNLIMACGGILPLLSAATSASHELENIEPSQGLAVEA
SVTFLQRLINLADVLIFASSLNFTEIEAEKNMSSGGILRQCLRLVCAIAVRNCLECQQAQ
FKGAEGSTRSYTVMPSTAVGTAKSASAQSPIDAVMGGMSTVRDLDRLLQDMDINRLRAVV
FRDIEDGKQAQFLALAVVYFISVLMVSKYRDILEPHNDRKRPLRSQSSRSTDSGAVSAGT
EVENSFDLRRYDSGIGDDHTSAAASEADLSSSGVTHGPDAISEALSTLSSEVRGAPSGDS
KSKNVKDILRSLVSAPSEDIMVDPNLLPLSFLGPVSDLDRRSSLQFRSFDRSVIVAPKKA
GTLPSQVPSASAQTSTAASVSGGTPVDGVAVVSSGDASQNPSEDSAAAGGQVPASSSLPS
VPPLSPVTQNTAPNMSISERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGT
SLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLVRVANEA
EFILSRQRAEDIHKHAEFESTCAQYAAEKRDEEKMCDHLIRAAKFRDHMTSTQLIQKIIN
ILTDKHGAWGNSSFSRPREFWRLDYWEDDLRRRRRFIRNPFGSSHSEATLKVAAEHAVAD
TSAPEEDILKQSIRSQALGNQNSESETSLDGDDDTLSSLEDKDLENLTGPVNLSTSAQLI
APAAVVKGTMSVTTSELFFEVDEDDPSFKAIDPKILSYTEGLHGKWLFTEIRAVFSRRYL
LQNTALEVFMANRTAIMFNFPDAATVKKVVHSLPRVGVGTNFGLPQTRRISLATPKQLFK
TSNMTQRWQRREISNFEYLMFLNTISGRTYNDLSQYPVFPWIITNYESAELDLTLPSNYR
DLSKPIGALNPKRAAFFSDRYESWEDDQVPKFHYGTHYSTSSFTVMWLLRIEPFTTFFLN
FQGGKFDHADRTFSSLSRAWRNSQRDTSDVKELIPEFFYLPEMFVNANNYNLGVMEDGVV
VSDVDLPPWAKSPEDFVRTNRQALESEFVSCQLHQWIDLIFGYKQQGPEAARALNVFYYL
TYEGAVNLSSINDPMLREAVESQIRSFGQTPCQLLIEPHPPRSSAMQVYLLLQTPLMFTE
QMQQDVIMVLKFPSNSPVTHVAANTQPGLTSPAIITVTANRLFSVNKWHGLTGHQNTGEQ
QYQLPVEIDPLIASTVGSHRRQISDLLDQSIQISSQCFVITADNRFILLCGFWDKSFRVY
STDTGKLTQIVFGHRDVVTCLARSESYIGGDCYVLTGSRDATLLLWYWNGKNSSIGESPG
TEFTTPRAILTGHDCEVTCVSVCAELGLVISGCKEGPCLIHSMNGDLLRTLEATENCLRP
RLIQSSTEGHCMIYYDKGQFCLFSVNGKLLRHMQVEDSIKAMLLSRDGQYLLTGGDGGVV
SVWQVSDLKQLFAYPGCDAGIRSMAMSHDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8823 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgcagaggcggcagcgggcgcagcgcggccaggtgatggaaaggacgggcca
ccgggagccatgcagctcaaccccgcagtgcccattaggggaatcaggatgaaattcgcc
gtgctggctggcctggtggaagttggggaagtttctaaccgagacatcgtggagaccgtg
ttcaacctgctggttggcggtcagtttgaccttgagatgaacttcatcattcaggagccg
gagagcattgtgtgcatggtagagctgttggacaagtgtgaaccaacctgtcaggctgag
atttggagcatcttcaccgccatcctcaagaaaagtgtccgaaacctgcaggcgtgcact
gaagtgggactaatccagcaggtgctgcacagaatatcgacaactgacagcatgattgca
gacctgctcgtggacatgttgggtgtgctcgccagctacagcatcacagtgaaggagcta
aagctgttcttcagcaagctgcaaggggaaaagggccaatggccgcgtcatgcagtgaag
cttttgtcagtgctgaagtacatggcgcacaggaacggtccagactcgttcttcagcttt
ccagggaaaaatgcagctgctatagctctaccccccattgcaagatggccgtaccagaat
ggatttacattccacacatggatccgaatggatcctctaaacaacatcaatgtcgacaaa
gacaagccttatctatactgcttccgcaccagtaaaggcatgggctactctgcacacttt
gtgggcagctgtttgatagtgacctcattaaagtcgaagggcaaagggttccagcactgt
gtgaagtacgactttaaaccccaaaagtggtatatggtgactctcgttcacgtctacaat
cgatggaaaaacagtgaaatcagctgctttgtgaatggagaattggcctcatttggagat
attgcctggttcgtcaacaccagcgacacatttgacaagtgcttccttggatcgtctgag
acggcggacgtgaaccgtgtcttctgtgggcagatgggggcagtttatctgtttggagag
gctctcagcgctgctcagatcctggcgatctatcagctgggtcctggctaccagggcaca
ttcaagtacaaggccgagagtgacttgctgtttgcggagcatcacaagaccttgctgtac
gacggcaagctgtcctcttccatttccttcacctacaatccctgcgccacagatgcccag
ctctgccttgagtcctccccgaaggacaatgcctcaatttttgtccactctccccatgct
ctcatgctacaggacgtgaaggctgtggtgactcactcggtccagagcggcatccactcg
atcggtggcatgcaggtcctcttccctctcttcgcacagctggattattgtcgtccctcc
agccaagagcccgacacctctgtctgctgcaccttgctgtccttcatgatggagctcttg
aaaaactctgtggctatgcaggagcaggtcttggcctgcaaaggctttctcgtcatcggc
tacactttggagaagtcttccaagatgcatgtgacgcggccggtcctggacattgttctg
gccttctccagatacctgagcaacctgcagaatggcatctatttacttaagcagctttgt
gatcacattatgttcaaccctgccatctggatccatgcccctgccaaggtacagctgatg
ctctacacctacttggcgacagagttcatcagcacggtgaccatttataacgctgttcgc
agggtgggcaccgtgcttcagatcatgcatacactaaagtactactactgggttgtcaat
cctcacaactgcagtggagtcatacccaaaggcgttgatggtccaaggccaaatcagaag
gagatactctctttgcgggcctttttgctgttgtttatcaagcagctcattatgaaggat
catggtgtgaaggaagacgaactgcagagtatcctcaattacctcctgaccatgcatgag
gatgaaaatctcatagatgtgctacagctgttggttgctctgatgtctgaacatccaggc
actatggtccaagcctttgaccagcgaaatgggattcgtgttttgtataagctcctggct
tcaaaaaatgaaggaattagggtccaggctctgaaggtcatgggctactttctgaagagc
ttgccaccaaagaggaagtctgaagtcatgctaactcacggccttttctcgctgctcact
gaacgtctgatgctccactccaacccgttcaccatgacaacctacaactccctctttgag
attcttaccgagcagatctgcactcaagtaatccataagcagcacccagacccagactcc
aacgtgaaaattgtcaacccacaaatcctgaaggtaatcgctgctctcctgaagaactct
ccccagtcgcctgagaccatggaggttcgcaggatctttctatcagacatgatcaaactg
ttcaataacaaccgagagaaccgcaggagcctgctgcagtgctcggtgtggcaggagtgg
atgctctccctgtgcttcgtcaacccgcaaaacaacgaggagcagaaaattaccgagatg
gtgtacgcaatcttccgcatcctgctctaccacgccatcaaatacgagtggggtggttgg
cgcgtctgggtggacaccctgtccatcacccactccaaggtgacctttgagcagcacaaa
caaagtttgtcccgcatgtttcgccagtaccagaaacagggctctacaagctctcggaac
accattcgcaccatctctggggtgagccaaagctctgaagatatgaaatctgttaacgga
ccacctgctgaagagacggcgccctcaacggtcattgagctcgcagtagacgaagagtcc
caaaaatctgttgacacggcatccagctccattatcacatcgacaccaatggaggctgta
gaagacggtgaccatccgttcatcacagtgtctaacatcctggccagcactgaggaagag
cagaaggtcgagaggtcttctggaaatcaatcaaatgttgacaaagaaactggggctacg
gtgatgcacaaagctgaagaacaggaagaggtgactgaaccagcatccgagaaaagcaat
gatgatccagaaagagtagagagcgcccatagtgaagctgctggtgcaaaaactgaggaa
gcggttgaagactctgttccccaaacagatgatgatgcagagacactggaaaccaacaag
gaaaaatgtgatatatcaaagtcctcagcagaagagtctactgtggtttctgaaaaacaa
gatgagaccaagcaaatgtcccctgagccttcaggttctctggagaacagcgtgctgggc
ggagcctctgttttcaacgaggacttggttgacgtgtcatctattagtgaccagattaac
ccgagtgacactgatgatagccaagaagagtcctcttacgcttcagctgctacaggagag
gcaggagagctagataaaaaagaggaggataagcatgaaggtgatggaagcaaaatgaaa
gatctccaacaacaggagacacaaatggaagaagacaaagaggaaatgaagaaggttaga
aaagaagaaaagggagaaagtgaacttgtagagaaccaggtgccatgcttggaaagtcag
actcctcaaacagaaacaggggaccaaagtgtcaaagaacctaccaaagaaaatgttagt
gatccacagtcttcctctaaaacagaaggtactgctacagaccagcaggctccagatgtg
gtaccacttccttcagtccaggaggctcctgcagctccagagccaccctcacaaagccag
acttcagaacccagtgaggccactgcagaggagatcttgcctggcgcctctgagagcagc
accgctggctccagctccaacaccagcagcaagagttcagatgctgtcaccagaaccaaa
gagatcaaaattgcccgactggatgtggcaaatgtggccatggacacagagaaacttgaa
ctgaaggagacctcttcaacagaatcaagccaaggccaaacagcaacaccagcagcaggt
gaagcaggaagtccatcagaccggccagaagacggcagcacctcgactcctcgctccacc
atgttccgtatcccagagttccgctggtcccacatgcaccagcgcctcctcaccgactta
ctcttctccattgagacagatgttcaggcatggaggagtcactccacaaaaaccattctg
gactttgtgaacagcagcgagaacgttgtttttgtccacaacagtattcatctaatctcc
caggtggtggacaatctcattatggcttgtggaggcattttacctctgctgtctgctgcc
acatctgcctcccatgaactagagaacatagagccatcccaaggcctggcagtggaggct
tcggtcaccttcttacagcgcctcattaacctcgcagatgttctcatctttgccagctcc
ctgaacttcacagagattgaagctgagaaaaacatgtcgtcagggggtatcctgcgtcag
tgcctccgccttgtttgtgctatagcagtgagaaactgtctggagtgtcagcaagcccag
tttaaaggggcagaaggttcaacaagaagctacaccgtcatgcccagcactgcagttgga
acggccaagtctgcatctgcacagagtcccatcgatgcagtgatggggggcatgtctacc
gtgagagatctggaccggctcctccaagacatggacattaaccgcctcagggctgttgta
ttcagagatatcgaggacggtaagcaggctcagtttctggcacttgctgtggtctacttc
atctcagtcctcatggtgtcaaagtatcgtgacatcttggagccccacaatgacaggaag
cgtcctctccgttcccagtcttccaggagtacagacagcggtgccgtttcagccggaaca
gaagtggaaaacagcttcgatctgagacgctacgattcaggcattggcgatgaccacacc
tcagctgcagcgagtgaggccgatctgtcgtcttctggggtcacgcatggtccagacgcc
atctcagaagccctgtccactctgtcctctgaggtcagaggagcaccttctggtgactca
aagtccaagaatgtgaaggacatcctccgcagcttggtgagcgcgccgtccgaagacatc
atggtagacccgaatctgctgcccctgtcgtttctgggacctgtgagtgacctggacaga
cgatcatctctacagtttcgctcatttgatagaagtgtcatcgttgcaccaaagaaagcg
ggcacgttgccgtctcaagtgccttctgcctctgcccagacctccactgctgcttcggtc
tctggtgggacaccagtcgacggtgtcgctgtggtatcttcaggcgacgcctcccagaat
ccctctgaggactctgcagctgcaggcggccaggttccagccagctctagcctgccatct
gtccccccactctcccctgtgacccagaacacagcccccaatatgagtatctcagagcgt
ctggagcacgcgctggaaaaagcggctcctttgctgagagagatctttgtcgacttcgcc
ccgtttctctctcggacactgctgggcagccacggacaggagctgcttatcgagggcacc
agtctggtgtgcatgaagtccagcagctcggtggtggagcttgtcatgcttctttgttct
caggaatggcagaactccatccagaagaatgcaggactggctttcatcgagttggtgaac
gaaggcagactcctcagccacacaatgaaggaccacctggttcgtgtcgcgaatgaggcc
gagtttatcctgagcagacagcgggctgaagatattcataagcatgcagaatttgagtct
acctgtgctcagtatgcggcagagaagcgagatgaggagaaaatgtgcgaccacttgatc
agagctgccaaatttcgtgaccacatgacatccacccagctcatccagaagataatcaac
attctgactgacaaacacggagcctggggaaattcgtccttcagccgtccgagggagttc
tggcgcctggactactgggaggacgatttaaggaggcgacgtcgcttcatcaggaacccc
tttggatccagtcactcagaagctacgctcaaagtggcggccgagcacgcagtggctgat
acaagtgcgcctgaagaggacattctcaagcagtccatcagaagtcaggctctggggaat
caaaactctgagagcgagacgtctctggacggagacgatgacaccctgtcgtccttagag
gacaaagatctggagaacctaacaggcccagtaaacctgagcaccagcgctcagctcatc
gctccggctgcggtggtgaaaggcaccatgtcggtcaccacctccgagctctttttcgag
gtggatgaagacgatccgagctttaaggccatcgatccaaagattttgtcctacacagaa
ggtcttcatggaaaatggctgttcaccgagatccgtgcagtcttttccagacgctacttg
ctgcagaacacggctctggaagtgttcatggcaaacagaaccgccatcatgtttaacttc
ccagatgcagccacagtaaagaaggtggtccacagccttcctcgtgttggagtgggcacg
aactttggccttcctcagaccagacgcatttctcttgccacacccaagcagctcttcaag
acatccaacatgacgcagcgatggcaacggcgcgagatttccaacttcgagtacctgatg
tttctcaacaccatctctggtcgcacctataatgacctgagccagtacccagtcttcccc
tggatcatcaccaactatgagtcagcagaactggatctcactctgcccagcaactacaga
gatctgtccaagccaattggagcgctgaaccccaagagggcagcattcttttcagaccga
tatgaatcctgggaggatgatcaggtgccgaagttccactatggcacccactactccacc
tccagcttcaccgtgatgtggctgctacgcatcgaacccttcaccacgttcttccttaac
tttcaaggagggaagtttgaccatgctgaccgcaccttctcctcactgtccagggcctgg
agaaactcccagagagacacatctgatgttaaggagctgatcccagagttcttctatctg
cctgagatgtttgtcaacgccaacaactacaacctgggagtgatggaggacggcgttgtt
gtctctgatgtggatcttccaccttgggccaaaagcccggaggactttgttcggactaat
cggcaggcgctggagagtgagttcgtgtcgtgccagcttcaccagtggatcgacttgatt
ttcggctacaagcagcagggacctgaagctgctagggccctcaatgttttctactatcta
acgtatgaaggtgcggtcaacctgagctccatcaacgaccccatgctccgagaggccgtg
gagtctcagatcagaagttttggacagactccttgtcagttgctcattgagccacaccca
cctcgaagttcagccatgcaagtgtatcttctcctgcagaccccactgatgtttacagag
cagatgcagcaggatgttatcatggtactgaagttcccgtccaattctcccgtgacgcac
gtcgcggccaacactcagccaggtctcacgtcgcctgccatcatcaccgtcaccgccaac
cgcctcttttctgtgaacaaatggcacggtttgacaggtcatcagaacaccggggagcag
cagtaccaacttcctgtggaaattgaccctttgatagccagtaccgtgggctctcatcgt
cgtcagatctcagaccttctggatcagagcatccagatcagctcgcagtgttttgtcatt
actgccgacaaccgcttcatcctgctgtgtggcttctgggacaagagcttccgggtctac
tccactgacacagggaaactgactcagatagtgttcggacaccgggacgtggtgacatgt
ctcgctcgctctgagtcatacatcggaggggattgctacgtcctgacgggctccagagat
gccaccctgctgctgtggtactggaacggaaagaacagcagcatcggggaaagcccgggc
acagagtttaccacacctagggccatcctgactggccatgactgcgaggtgacctgtgtc
agcgtgtgtgccgagttgggtctcgtcatcagtggctgcaaagagggtccttgtctgatc
cattcaatgaatggagatctgcttcggaccctcgaggctactgagaactgcctgcggccc
cgactcatccagtcctctactgagggccactgcatgatttattacgacaagggacagttt
tgtctgttcagcgttaatggtaaactgctcagacacatgcaagtggaagacagcatcaag
gccatgcttctgagtcgagatggtcagtatttgctgacaggtggagatggaggagttgtg
tctgtctggcaggtctctgacctcaaacagctcttcgcctatcctggctgtgacgcaggg
atccgctccatggcgatgtcacatgatcaacggtgcatcatcaccggcatggcgtctgga
agcatcgtcctcttctacaacgacttcaacaggtggcatcatgagtatcagaccagatat
tga
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integrated database retrieval system
