Girardinichthys multiradiatus (darkedged splitfin): 124868976
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Entry
124868976 CDS
T08099
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03013
Nucleocytoplasmic transport
gmu03015
mRNA surveillance pathway
gmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124868976 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
124868976 (eif4a3)
03015 mRNA surveillance pathway
124868976 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124868976 (eif4a3)
03041 Spliceosome [BR:
gmu03041
]
124868976 (eif4a3)
03009 Ribosome biogenesis [BR:
gmu03009
]
124868976 (eif4a3)
03012 Translation factors [BR:
gmu03012
]
124868976 (eif4a3)
Enzymes [BR:
gmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124868976 (eif4a3)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124868976 (eif4a3)
mRNA cycle factors
Stress granule specific factors
124868976 (eif4a3)
Spliceosome [BR:
gmu03041
]
Complex C
Other components
EJC/TREX
124868976 (eif4a3)
Ribosome biogenesis [BR:
gmu03009
]
Eukaryotic type
90S particles
Helicases
124868976 (eif4a3)
Translation factors [BR:
gmu03012
]
Eukaryotic type
Initiation factors
eIF-4
124868976 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
124868976
NCBI-ProteinID:
XP_047222602
LinkDB
All DBs
Position
5:53105925..53125119
Genome browser
AA seq
406 aa
AA seq
DB search
MAAAGTLGRKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCISVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHSCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccgggacactgggcaggaagaggctcctaaaggaggaggacatgactaag
gtcgagtttgagaccagcgaggaggtggacgttacccccaccttcgacacgatggggctc
cgggaggacctgctccgcggcatctacgcctacggctttgagaagccatcagccatccag
cagagagccatcaagcagatcattaaaggccgtgacgtcatcgctcagtctcagtcggga
acaggaaagacagccaccttctgtatctctgtgctgcagtgtctggacatccaggtgagg
gaaacccaggctctgatcctcgctccaactcgagagctggcgggacagattcagaaggtg
ctgctggctttgggagactacatgaacgttcagtgtcactcctgcatcggaggcacaaat
gtgggagaggacatccggaaactggactacggtcagcacgtggtggccggcacacccggc
cgagtgtttgacatgatccggcgccgcagtctgagaaccagagctatcaagatgctggtt
ctagatgaagctgacgagatgctgaacaaaggtttcaaggaacagatctacgacgtgtac
cgttacctgcctccagccacgcaggtggttctcattagcgccacgctgccacatgagatc
ctggagatgaccaacaagttcatgacggaccccatccggatcctggtcaaacgtgatgag
ctgactctggagggcatcaagcagttcttcgttgccgtggagagggaggagtggaagttt
gacactctgtgtgacctttacgacactctgaccatcacacaggccgtcatcttctgcaac
accaagaggaaggtggactggctgactgagaagatgagagaggccaacttcacggtgtcc
tcgatgcatggagacatgccgcagaaggaaagggagtccatcatgaaggagtttagatct
ggtgccagccgtgttctgatctccacagacgtgtgggcccggggtctggacgttcctcag
gtctccctcatcatcaactatgacctgcctaacaacagagaactctacatccacaggatt
ggtcggtcaggccgatacggcaggaagggtgttgccatcaactttgtgaagaacgatgac
atcaggatcctacgagatattgagcagtactactccactcagattgatgagatgcccatg
aatgtggcagacctgatctga
DBGET
integrated database retrieval system
