Girardinichthys multiradiatus (darkedged splitfin): 124868992
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Entry
124868992 CDS
T08099
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K06243
laminin, beta 2
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124868992 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124868992 (lamb2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
DUF7310
Motif
Other DBs
NCBI-GeneID:
124868992
NCBI-ProteinID:
XP_047222633
LinkDB
All DBs
Position
1:7380722..7477591
Genome browser
AA seq
1866 aa
AA seq
DB search
MERGPNRQQNRRSYSLMSIRLAIQMPIMALHLSLLMLALRAVGQELPSSPHGCTEGSCYP
ATGNLLIGRAINLTATSTCGLDRPEQFCIVSHLQEQDKCFECDSRQPYDPYRHRNSHRIE
NVIYLTDLNGDETFWKSVNGKEDVSIRLNLEAEFHFTHLIMKFKTFRPAALIIERSADFG
RTWHPYRYFASNCTRTFPSIPANGLHQINDIICEQRYSDIEPSNNGEVIFKVLDPAIPVE
DPYSLDIQELLRITNLRINFTKLNTLGDDLLDRRSDVLQKYYYAINELVVRGSCFCYGHA
SECAPVPGVNTHEIGMIHGRCVCKHNTEGLNCERCKDFHNDSPWRPAEAEDPHTCRACNC
NGHSDQCHFDAAVYLATGNTSGGVCDNCLHNTMRRNCEMCKPFYYQDPNRDIRDPRVCVA
CDCDPVGSLEGGVCDSHTDLDLGMISGQCRCKANVRGKRCDDCKAGYYGLSQSDPLGCQP
CNCDPRGIIMMDAPCDQISGDCSCKRYVTGRYCNQCLPEYWGLSNNLGGCRPCECDFGGA
FNNRCMMDSGQCDCRRHLIGRQCSDVQPGYFCAPLDYYKYEAEEATGLSPTDPSLPGQVR
PQAADDCIQHLSNQARRHRRHRRISSSQQYQAALRRIRQLQQTPDVTTVRREHAPSHVVT
WTGPGFARVKDGAGLVFTIDNIPYAMEYDIMIRYEPESTEDWEAVVSITSVELPSSHRCG
NLLPTEQLFTETLLHRNRYIVLSRPFCFEPSNRYVVSIRFQRHGVAYRHLTAFVLIDSLV
LIPKYTELPGFQGSDPDAEQHREDMIRYMCLDSFMITPMPALAEMCSKLICSISAHIHDG
ALFCQCDPQGSISSECDKVGGQCRCKANVIGRHCDQCAPGTYGFGVSGCTACNCHPEGSF
SHQCDPVTGQCPCRQGATGHQCSDCQPGQWGFPSCSPCQCNSHADLCDPRTGECRDCRDS
TAGHLCERCMEGFYGNPVLGSGDHCHACPCPGNPGSDHFNGHSCYTDYTSDQIICNCKQG
YSGPRCDQCAPGYYGNPEQPGGQCLPCECNNNIDPQDPGSCDPRTGQCLRCLYHTDGPSC
SQCKAGYYGNALIKDCRRCTCVSAGTLVSACSDGQCLCDHQTGACPCRESVVGKSCDQCA
PEHWNYGQDGGCQWCNCVQQNSMGAHCNMFTGQCQCRPGFGGQRCNECQDYHWGDPQVEC
KDCNCHPLGSQMAQCNRETGQCECRDGMAGARCDECARGFTGIFPNCVRCHQCFLLWDDY
LCQMRRDLDHIQYNIQRILESGITPGVGNDRIKELEQKLKQVQDLIDAGDTDKIHQLIGQ
RMDDLSTEILLTNERLNEIGQDTNKTKGADEVLKRTLNDLEKELRDINATLAYKQGLLDN
YLTSGFADQFEKVKKYYQESQLAEEKCNTSVSGPANPVEQSSQTRGITEELLDATKAKLL
QNLTAHNNSLNNLNQNAQNLSEKVQHLSQKVCGGPSNISQNGSCSKSQCGGAGCGDDQGN
LLCGGEGCNGTMSSSLTALNDARNVTDSLKAAMEELQGVTKKLQDIASQTQVVKIQTMNA
LKKAQKKKESFEKSNKDLKDLIKMIKDFLTEEGADPESIQKVAQQVLEIKLPFNRTTLDK
MTMQIKESIYNLSNVQGIVNQTSHLIRNAEELLNKAKEAENRAVGVKDLVNNTKQALNVS
ETAIEKAKAALKVAQNNLNSTRNATAEVENGLLDLEDNQMDIMMRLTNLSREVEALKNKT
EINRLMAEDALALANNATHQASTLEQSLNDTEKRYSELQIKMESLGGDTGNLNSIHQKVK
DMKKDAEELLSKANNGINELDKLGEILKSNEERMQKQREELEDLKQNATVVRDIIQEQVK
KYSSCQ
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggtcctaacagacagcagaacagacggagttacagcttgatgtccatccgt
ttagccatccagatgcctatcatggctttgcacttaagccttctgatgctggctctgagg
gcagttggtcaggagctcccatcgagccctcatggctgcactgagggaagctgttatcct
gcaacaggaaaccttttgattggacgggctatcaacctgaccgccacctccacgtgcggt
ctggacagaccggagcagttctgcattgtcagccacctgcaggaacaggacaagtgtttt
gagtgtgactcgcgccagccgtacgatccctaccgccacagaaacagccaccgtattgaa
aatgtgatctacctaacagacctcaatggggatgagaccttctggaagtctgtcaacggt
aaggaagacgtcagcatcagactgaaccttgaggccgaattccacttcacgcatcttatc
atgaagtttaagacttttcggcctgcagctttgataattgagcgctcagctgattttggc
cgcacgtggcacccctaccgctactttgcctccaactgtactagaacttttcccagcatc
cctgccaacggcttgcatcaaattaacgacatcatctgtgagcaacgctactctgacatt
gagccctcaaacaacggagaggtcatttttaaagtgctggatccagcgattcctgtggaa
gatccctacagcttggacatacaagaacttttgcgcatcaccaacctgcgcatcaacttc
acaaagctcaacaccttgggagacgatctgttagaccgccgctcggacgtcttacaaaaa
tactattacgccattaacgagctggttgtccgaggaagctgcttttgttatggacacgcc
tcagagtgcgcaccagtgccgggagtaaacacccatgagattggcatgatccatggccgc
tgtgtttgcaagcataacactgaaggcctgaactgtgaacgctgcaaagatttccacaac
gactcaccttggaggccggcggaagcagaggacccgcacacctgcagagcatgtaactgc
aatggccactcagaccagtgtcacttcgatgcggcagtgtatttggctacaggcaacacc
agcggaggagtttgtgataactgtctgcacaacacaatgcgacgcaactgtgagatgtgc
aaaccattctactaccaagaccctaacagggatattcgagatccccgtgtctgtgttgcc
tgtgactgtgacccggtgggatcattagagggaggggtgtgtgacagccacaccgacctg
gatttggggatgatctcaggacagtgtcgctgcaaagccaatgtgaggggcaagcgctgc
gatgactgcaaggcgggttattacggactcagtcagagtgaccctctgggatgccaacct
tgtaactgtgacccccgtggcatcattatgatggatgctccttgcgatcagatcagtggg
gactgctcctgtaaaagatatgtcacgggtcgctactgcaatcagtgtctgcctgaatac
tggggtctcagtaataacctgggtggctgcagaccttgtgagtgtgacttcggtggagcg
ttcaacaacaggtgcatgatggatagtggccagtgcgactgcaggagacatcttattggt
cgacagtgttcagatgtgcagcctgggtatttctgtgctcctctcgactattacaaatat
gaggctgaagaagctaccggactctctcccactgatccttcgttgccgggccaggtccgt
ccccaggcagcagacgactgcattcaacatctcagtaaccaggcgaggaggcatcggcga
cacaggcggatttcaagctcgcagcagtatcaggcagcactgagacgcatccgacagctt
cagcagacgccggatgtcaccacggtccgcagagaacacgctcctagccacgtcgtcaca
tggaccggtcctggttttgctcgtgtcaaagatggcgccggcttggtgttcactattgac
aacatcccctacgccatggagtacgacatcatgattcgctacgagcctgagtccacagag
gactgggaggctgtagttagtatcacttctgttgagctgccctcaagtcaccgatgtgga
aaccttctaccaaccgaacagctcttcactgaaaccctgctgcaccgcaacagatacatc
gttctgtccaggccgttttgttttgagcccagtaatcgttacgtggtatcaatcaggttc
cagagacacggagtcgcttacagacaccttaccgcctttgtcctcattgactcgctggtg
ttaatccccaagtacaccgagcttcctggtttccaagggagtgatccggatgcagagcag
caccgagaggacatgattcgctacatgtgcctggattcctttatgatcacgccgatgcca
gctctggctgagatgtgctccaaactcatctgcagcatctcagcccatattcatgatggg
gctctgttctgtcagtgtgaccctcagggctccatcagcagcgagtgtgataaggtcgga
ggtcagtgtcgctgtaaagccaacgtcatagggcggcactgtgaccagtgtgccccggga
acctacggcttcggagtgagtggctgcactgcctgtaattgccatccagagggctctttc
agccaccagtgcgacccagttacaggtcagtgcccttgcaggcagggagccaccgggcac
caatgctcagactgccaaccaggccagtggggcttcccaagctgcagcccctgtcagtgt
aacagccacgcagacctctgtgatccccggacaggggaatgcagagactgcagagacagc
acagcgggacacctctgcgaacgctgcatggaagggttctatggaaacccagtgcttggc
tcaggggatcactgtcacgcctgcccctgccctggtaaccccggttcagaccactttaat
gggcattcttgttatactgactatacctctgatcagatcatatgcaactgcaaacaaggc
tattcaggtccccgctgcgaccagtgtgccccaggttactatggcaacccagagcagcct
ggtgggcagtgtctcccctgcgagtgcaataacaacatcgacccccaggatcctgggtca
tgtgaccccaggactgggcagtgcctcaggtgtctgtaccacaccgacggaccgtcctgt
tcccagtgcaaagccgggtattatggcaatgctttgatcaaggactgcagacgttgcacc
tgtgtgtctgctggcacgttggtgtctgcctgcagtgatggacagtgtctctgtgaccat
cagaccggagcctgtccttgcagagagtccgtggtgggtaaaagctgtgaccagtgtgcc
cctgagcactggaattatggccaggatggaggctgtcaatggtgtaactgtgtccagcaa
aattccatgggggctcactgcaacatgttcacgggccagtgtcagtgtcgccccggcttt
ggaggacaacggtgcaacgagtgccaagattaccactggggggacccacaggtggagtgt
aaagactgtaactgtcacccactgggctcacagatggcccagtgtaatcgagaaacgggg
cagtgcgagtgccgggatggaatggcgggagcccggtgcgatgaatgtgcacgtggcttc
acgggcatcttccctaactgtgtccgttgtcatcagtgcttcctgctgtgggacgactac
ttgtgccagatgcgaagggacttagaccacatccagtacaacatacagaggatcctagaa
agcgggatcacgcctggggttgggaacgaccgcatcaaggagcttgagcagaaactgaaa
caggtgcaggacctgattgatgcaggggacacagacaagatccatcagctgattggacag
agaatggatgacctcagcactgagattcttctcactaatgaacgtctgaatgaaatcggc
caagatacaaacaaaacgaaaggagcagatgaggttttaaaacgcaccttgaatgacctg
gagaaagagctgagggatatcaatgctacgctggcttacaaacaagggctgctggataac
tacctcacctcgggatttgcagatcagtttgagaaagtgaagaagtactaccaggagtca
cagctggccgaggagaaatgcaatacctcagtgtcgggtcctgcaaatccagtcgaacag
tccagccaaactcgcgggatcaccgaggagctgctggatgccacaaaggccaagctcctc
cagaatctaactgctcacaacaattcattgaacaacctgaaccaaaatgcccaaaacctc
agtgagaaggtccagcatctcagccaaaaggtgtgtggtggtcctagcaatatcagccaa
aatggcagttgctctaaaagccagtgtggtggagcgggttgcggtgacgaccagggtaac
cttctttgtggtggagagggatgcaatgggacaatgagctcttctttgaccgcgctgaat
gacgcaaggaacgtcacagacagtctgaaggctgccatggaggagctgcagggggtcaca
aagaagcttcaagatatagcgtctcagacgcaggttgtgaaaatccagacaatgaatgct
ctgaagaaagcccagaagaagaaagaatcctttgaaaaaagcaacaaagatcttaaagat
ttaattaagatgataaaagacttcctcacagaggagggagcagatcctgagagcatccag
aaggttgcccagcaggtcttagagatcaagctgccgttcaacaggaccactctggacaaa
atgaccatgcagatcaaagagagcatttacaacctcagcaacgttcagggcattgtgaat
caaacctcgcatctcatccgcaatgctgaggagctgctgaataaggctaaagaagcagag
aaccgagcagtgggagtgaaggatctcgtgaataacaccaagcaggctttgaatgtttct
gagacggccatagagaaagcaaaggcggccctgaaggtggcccaaaacaaccttaacagc
acaaggaacgccactgctgaggtggaaaatggcctgctggatctcgaggacaatcagatg
gacattatgatgcgtctaaccaacctgtccagggaggtggaagctctaaagaacaagacc
gagataaacagactcatggctgaggatgccctcgccctggctaacaatgccactcaccag
gcatccacattggagcagagtctaaatgacacagagaaacggtacagtgagctgcagata
aagatggagtctcttggaggcgatacaggaaatctcaacagcatccaccagaaggtcaaa
gatatgaagaaggatgcagaagagctcctaagcaaagccaataatgggataaatgagctt
gacaaactaggggaaatattgaagagcaacgaggagcggatgcagaagcagcgtgaggag
ctggaggacttgaagcaaaacgccacagttgtgcgagacataatccaggaacaagtgaag
aagtacagtagctgccagtga
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