Girardinichthys multiradiatus (darkedged splitfin): 124869036
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Entry
124869036 CDS
T08099
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124869036 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124869036 (fip1l1b)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124869036 (fip1l1b)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
124869036
NCBI-ProteinID:
XP_047222691
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Position
5:complement(12345474..12357526)
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AA seq
553 aa
AA seq
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MNLNMSAEEADKTATTDASAGDEEEEWLYGDESESKEEDEETKLSAAVSAPAETSTDDAA
VADVHATGNGVASEVPGEAAGEDVESDSDSDDDDDDVQVTIGDIKTGAPQYTTYGAPPVN
LNIKTTGSRPYGQVTTKLKGVDLDAPGSINGVPVLEVDMESFEEKPWRKPGADLSDYFNY
GFNEDSWKAYCEKQKRLRMGLEVSTIGSVTSKITVQQGRTGNEKDVSSLAVHTSKTDFTS
PVSLYKSAVSQITRKTSGTIDVIGGQMATISRVEGRRRHNLEGNNIQVISEHTTSEAEPA
AAKIPTFFPPGPLPPNIPPPPFLPPPPNVSTAPPLIPPPRLPITVPPPGFHPPTSGPPPS
LIPTMDSSHAGGYDGRPVPPFPFPQGAYPPPLAGGVPPPWPPMVDNSKPWDYYSRREDKR
DKDRDRPRERTHERERDREHSPSTMSYTRSDGQTHTCDEERYRYREYPERGYPERHRDRA
SREKEERHRERRHREKEEGRHKSSRSSSSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASE
DMGADQENQEAME
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcaacatgtctgcggaggaagcggacaaaacagccaccactgacgccagcgcc
ggcgatgaggaggaggaatggctgtatggagatgagtcagaaagcaaggaggaggatgaa
gaaactaaactgagtgctgctgtcagtgcacctgctgagacttcaacagacgatgctgct
gttgctgatgtacacgctacaggaaacggagtggcctctgaggtgccaggtgaagctgca
ggggaggatgtggagagtgacagcgacagtgatgacgacgacgatgatgtccaagttacc
attggtgacatcaaaactggagcaccacaatacacgacatacggagccccacctgttaat
ctaaacataaagaccacaggttccagaccgtacggacaagtgaccacaaagctgaagggg
gtggatctggatgctcctggaagcattaatggtgttcctgtgttggaggtggacatggag
tcctttgaagagaaaccctggaggaagccaggagcggatctgtcagactacttcaactat
ggttttaacgaggacagctggaaggcttattgtgagaaacagaagagactgcggatgggc
ctggaggtctctacaattggatcagtgacgagcaagatcactgttcaacaaggcagaaca
ggaaatgaaaaggatgtatctagtttggctgttcacacttccaagactgactttacatct
cctgtcagcctgtacaagtctgctgtcagtcagatcaccaggaagacgagtggtaccatt
gatgtgattggtggacagatggccacaatcagcagagttgaggggcgacgcagacacaat
ctggagggcaacaatatccaggtgatctctgagcatacaacatcagaagctgaaccagcc
gcagctaagattcctaccttcttcccccctggaccgcttcctccaaacatacccccacct
ccttttctccctcctccaccaaatgtcagcactgcacctcctctcatacctcctcccaga
ttgcccattacagtccctcctcctggtttccaccctccaacaagcggccctccaccttct
ttaattcccacaatggacagcagccacgctggaggctacgatggtcgtcctgtccccccg
ttcccctttcctcaaggtgcttaccctccacctttagctggaggtgtgcctcccccatgg
ccccccatggtggacaacagcaagccgtgggactactattctcgtcgagaggacaagaga
gacaaggaccgagacagacccagagagaggacgcatgagcgggagcgagacagggagcac
agcccctcaaccatgagctacaccaggtcagacggacagacacacacatgcgatgaggag
cggtatcgctaccgcgagtaccccgaacgtggttacccagagcgtcatcgtgaccgggcc
agccgagaaaaagaggagaggcacagggagaggcggcacagagagaaggaggagggacgt
cacaagtcctctcgcagcagcagcagtcgaaggagacacgacagtgaggagggcgacagc
cacaggaggcacaaacacaagaagagtaagaggagcaaggagggcaaagaggctagtgag
gatatgggtgcagatcaggaaaaccaagaggctatggagtag
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