Girardinichthys multiradiatus (darkedged splitfin): 124869116
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Entry
124869116 CDS
T08099
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124869116 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmu03041
]
124869116 (sart1)
04121 Ubiquitin system [BR:
gmu04121
]
124869116 (sart1)
Spliceosome [BR:
gmu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
124869116 (sart1)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124869116 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
124869116
NCBI-ProteinID:
XP_047222812
LinkDB
All DBs
Position
5:44114167..44117319
Genome browser
AA seq
769 aa
AA seq
DB search
MGSSKKHKEKSRDKDAEERRREHKKHRHKDRDASDREKDRRKRSRSREKSRRESHSKAER
GSGEPRVKREKVDPGYEESNAEIQPQSASGDASLSIEETNKLRAKLGLKPLEMNEGKKEL
GTKEDPVVAETINPVMIQKQKEMREKLAAMKEKRLLNQKLGKVKAIGDDDWLDNTAAWVE
RSRKLAKEKEMAEKRAKLLEEMDEEFGVSSLVEEEFVQSKRDSYSSQDLKGLKVQHKVDS
FTEGQTVILTLQDKGVLEEEEDVLVNVGIVDKEKAEKNVELKKKKPDYKPYEEEESVDDM
VNFKPHTVLSKYDEEIEGEKKKSFRLGTWGFADGERERELQAMKETLRNQAQSLEMPALT
IASEYYTPQEMVGFKKTKCKVKKIRKKEKLTIADELLDDTRTSDFGSRVRGRGRKQAEEE
EQENEEKSKDGGGWPHETPQMSDDIRMAEMDISDEDDYIPPEPAVIEEDEAEQELQKQLE
KQRKLRQKRLLKDSGEKVAEQIKVLAKGNYDNDAEKKNNIVFNATSEFCRTLGDIPTYGL
SGNREDQEDIMDFEHEEEKDDGGGSDSEIDENIGWSTVNLDEEQQQADFSTASATILDEE
PIVNSGLAAALKLCTNKGLLDTQMQKVARVKAPKVGLPNDNYCIEDKMGFDDKYSRREEY
RGFTQEFKEKGSYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKTEKRMKKLE
EEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANNITK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgggctcttctaaaaaacacaaggaaaagagccgcgacaaggacgcagaggagcgccgt
cgcgaacataagaaacatcgccacaaggacagagatgcttcagatcgggaaaaagacagg
cgaaagcgttccagatccagggaaaagagcagacgagagagccacagcaaggctgaaagg
ggaagcggggagccaagagtaaagagggagaaggttgatcctggatatgaggagagcaac
gcggagatacagcctcagagcgccagcggagatgcgtctctcagcatcgaggaaacaaac
aaactccgtgcaaagctgggcctgaagcccctggagatgaacgagggcaagaaggagctg
gggaccaaggaggacccagtagtggccgagaccatcaaccctgttatgatccaaaagcag
aaggagatgagagagaagctcgctgctatgaaagaaaagcgcctgctcaatcaaaagttg
ggtaaagtcaaagcaatcggtgatgatgactggttggataacacggccgcttgggtggag
agaagtagaaagctggccaaagagaaggagatggcagagaagagagccaaacttctggag
gagatggatgaagagtttggagtcagcagcttggtggaagaagagtttgttcaaagcaaa
cgagactcttattcatcacaggatctgaagggtctcaaagtgcagcacaaggtggattca
ttcacggagggccagactgttatcctgaccctgcaagacaaaggtgtgctggaagaggag
gaagatgtgctcgtaaatgtgggaatagtggacaaggagaaagctgaaaagaacgtggag
ttaaaaaagaagaagcctgactataagccctatgaggaagaggagagtgtggatgacatg
gttaacttcaagccccacactgtgctctcaaagtatgatgaagaaatcgaaggtgagaag
aaaaagagcttccggttgggcacgtggggcttcgctgatggggagcgagagcgtgagctt
caagcaatgaaagaaacgctgcgaaatcaggctcagtccctggaaatgcccgctcttacc
attgcttcagaatactacacacctcaagaaatggtaggctttaaaaagacaaagtgcaag
gtcaagaagatcaggaagaaggagaagctgacgattgcagatgaacttctcgatgacacc
cgcacctccgattttggctcgagggtacgaggcagaggccgcaaacaggcggaggaggag
gaacaggagaatgaagagaaatctaaagatggtggcgggtggccgcatgaaactccccaa
atgtcagatgacatcaggatggcagagatggatataagtgacgaagacgattacattcct
cctgagccagctgtgattgaggaggatgaggcagagcaggagctacaaaaacagctggag
aagcagaggaagctgaggcagaaacggcttctcaaagactctggggagaaggtggcagag
cagattaaagtgttggctaaaggcaattacgacaatgatgccgagaagaagaacaacatt
gtcttcaatgccacttcagagttttgcagaactctgggggatattccaacctatggacta
tctggcaacagggaggaccaggaggatatcatggattttgagcatgaagaagagaaagat
gatggtggaggttcagactctgaaattgatgagaatattggatggagcacagttaacctg
gatgaagagcaacaacaggctgatttctccacagcttcagccaccattctggacgaggag
cccattgtcaactccggccttgcagctgcattaaagctgtgcacaaacaaaggcctattg
gacactcagatgcagaaggtggctcgtgtcaaagcgccaaaggtgggcctgcctaacgac
aactactgcattgaggacaagatgggctttgatgacaagtacagccgcagagaagaatac
agaggcttcacgcaggaattcaaggagaagggtagctataagcctgacgtcaagatcgag
tatgtggacgaatccgggcggaaactcactccaaaggaagctttcagacagctttcacac
cgattccatgggaaagggtctggaaagatgaagacggagaagaggatgaaaaagctggaa
gaagaggcgctgctgaagaagatgagcagcagcgatactcctcttgggacggtggctttg
cttcaggagaaacagaaatctcagaaaacaccatacatcgtgcttagtgggagtgggaag
agcatgaatgcaaacaacatcacaaaataa
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