Girardinichthys multiradiatus (darkedged splitfin): 124869167
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Entry
124869167 CDS
T08099
Symbol
si:ch211-79m20.1
Name
(RefSeq) uncharacterized protein si:ch211-79m20.1
KO
K17386
platelet-derived growth factor subunit B
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04010
MAPK signaling pathway
gmu04020
Calcium signaling pathway
gmu04510
Focal adhesion
gmu04540
Gap junction
gmu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124869167 (si:ch211-79m20.1)
04020 Calcium signaling pathway
124869167 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124869167 (si:ch211-79m20.1)
04540 Gap junction
124869167 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124869167 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
gmu04052
]
124869167 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:
gmu00536
]
124869167 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:
gmu04052
]
Cytokines
Growth factors (RTK binding)
124869167 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:
gmu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
124869167 (si:ch211-79m20.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
DUF7116
Motif
Other DBs
NCBI-GeneID:
124869167
NCBI-ProteinID:
XP_047222875
LinkDB
All DBs
Position
5:37998473..38026001
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AA seq
570 aa
AA seq
DB search
MRLLRLGGNMKSWVLQPLLLAVLLSARLRFGNAEGDPLPQSLVDLVLESPISSVEDLKLL
LKQEASSIEDTEDEHDSLPHSTHGRYIRSLVEAQPAQKAECKVRTEVMEITRSMLDRRNA
DFMLFPPCVEVQRCSGCCNTEHLQCVPTVTSSRYLQVIKRKFINRKPHYENAIISVEDHV
SCRCQRSSPSTSSSSSSTVVSQPNPLPPPPQKPPASSHLPLFPPHTPHPLPPKTHASKAD
LHRHDDLKHNQQHHHPHKHDPLARQWQQGSYTQLVRWTQPRVHQALTHVQTGVRHTTAGL
LGSVSTWPSETRAEHTIMGSPHYIGHGSGFDRSREEKEETDGGGVHHTDHEQQQKQLLKH
HQRQEHQCHQHPHNSQQYNPGGDEDQELRTQYQLHAPQSDSASPPVSITQAPETGENPTA
FISFLQKDSVTTEKYAEVTHHKQIETKADGQKKGAEREESGSAVSEDSARAEAANQGKEK
DSKLSGEGGHLTEEERRQKLLEMVQSEPEKTPLLHPHQRPKPTTFKSALSTVAPMSMAAY
QVPFRPASPRRRKRKHRKRISKAAMRAMIM
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcctcaggctgggcggaaacatgaagtcctgggtcctgcagcctctgctgctg
gctgtgctcttatcggcccgtctgaggttcgggaacgctgagggcgatccactccctcag
tcactggtcgacctggtgttggagtctcccatctcctcagtggaagacctaaagctgctg
ctgaagcaggaggccagttcaatagaagatacagaggatgagcatgacagtcttccacac
tccacccatggtcgatacattagaagtcttgtggaagcacagccagcgcagaaggcagaa
tgtaaagtcagaacagaggtgatggaaataacaagatccatgctggatcgtcgcaacgcc
gacttcatgctgtttcctccttgtgtggaagtgcagcgatgttcaggctgctgcaacacc
gagcacctccagtgtgtccccactgttacctccagccgatacctgcaggtaattaagagg
aagttcatcaaccgcaaacctcactatgaaaatgccatcatttcagtggaagatcatgta
agctgtcggtgccagcgatcttctccctccacatcatcttcttcctcttcaactgtcgtc
tctcaaccaaaccctcttccacctccaccacaaaagcctcctgcatcttcccacctacct
ctgttcccaccccatacccctcacccacttccaccaaagactcatgcttccaaggcggac
ctccatcgccatgatgatctcaagcacaaccagcaacaccaccatccgcacaagcatgat
ccgttggcgaggcaatggcaacagggcagttacactcagctggtgcgctggacgcagccc
agggtgcatcaagccctcacgcatgtgcagactggagtgcgccacacaacggctgggttg
ctcgggtcagtcagtacctggccatctgagacaagggctgagcacactattatgggaagc
ccacattatattggacatgggagtggctttgacaggagccgtgaggagaaggaggagaca
gatggtgggggagtgcaccatactgatcatgaacagcagcaaaagcagctgttaaagcac
caccagaggcaggagcaccagtgtcatcaacacccacacaactcacaacagtacaaccct
ggaggagatgaggaccaggagctgagaacgcagtatcagcttcatgctccccagtcggac
agtgcttctccacctgtcagcataacccaggcacctgagacaggagaaaatcccaccgct
tttatatcttttcttcaaaaagactcagtgaccactgaaaaatatgcagaggtaactcat
cacaaacagatagagaccaaagcagacggtcaaaaaaagggggctgagagggaagaaagt
gggtcagcagttagcgaggactcggctcgggcagaggcagccaatcaggggaaggaaaaa
gactccaaattgagtggggagggaggccatttaacagaggaggagagacgacagaagcta
ctggagatggtacagagtgagccagaaaaaacgcctctcctgcatcctcaccaaagacca
aaaccaacaacgtttaaatcagcactgtccactgtagcacccatgtcgatggcagcttat
caggtaccattccgtcctgcctctcctcgccgtaggaaaagaaaacatcgcaaacgcatc
agcaaagccgctatgagggctatgatcatgtag
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