Girardinichthys multiradiatus (darkedged splitfin): 124869312
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Entry
124869312 CDS
T08099
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM63-like
KO
K10654
tripartite motif-containing protein 55
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124869312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124869312
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124869312
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
MTCP1
Sina_RING
RFC1
bHLH_ILI
Zn_ribbon_FGT1_2
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
124869312
NCBI-ProteinID:
XP_047223067
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All DBs
Position
6:46292289..46299489
Genome browser
AA seq
410 aa
AA seq
DB search
MESLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDVFQASNPYLSTRSGSTVTSGGRF
RCPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQGSTSKPVPEKKQEQPMCEEHQDEKIN
IYCITCSAPTCSLCKVFGAHKDCQVAPLSDVFTKQKAELTDCISMLVGNNERIQAIISQL
DETCRAVDENGRRQKSKVCETFDHLFALLEEKKAEMTVRVNSEQEEKLNYIRSLNRKYSE
HLEGTAKLVESAIQTMDEPEMAVFLQTAKPLLQKLLQSTETSHLDKVQPGYENMEHFTVN
FEPQRQALAIVDFIKLDEDDDDSEEEVEASGPQPQFAPAAANQQPPLAPPSATPPHKPSE
TPSPSSLPSTQAPPPLPLPTASSPQSEQQSELENKDGPKHVFSFSWLNQK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggagagtctggagaagcagctcatctgtcccatctgtctggagatgttcaccaagcct
gtggtcatcctgccatgtcaacacaacctgtgccgcaagtgtgccaacgatgtgttccag
gcatccaatccctacctatccacgaggagcggctccacagtgacgtcaggtggacgtttc
cgctgcccgtcctgcagacatgaggtggttctggaccgacatggtgtttatggactgcag
aggaacctgctggtggagaacatcatcgatatgtacaaacagggcagcaccagtaagccg
gtgcctgagaagaagcaggagcagccgatgtgtgaggagcatcaggatgagaagatcaac
atttactgcatcacctgcagcgcccccacctgttccctctgcaaagtgtttggagctcac
aaagactgccaggtggctccgctcagcgatgtcttcaccaagcagaaggcagagcttact
gattgcatctccatgctggttgggaacaacgagaggatccaggcgatcatcagtcagctg
gatgagacctgcagagctgtggatgagaacggccggcggcagaagtcaaaagtgtgcgag
acattcgaccacttgtttgcactactggaggagaagaaagctgagatgacggtgagggtc
aacagtgagcaggaggagaagctcaactacatacgcagtctgaacaggaagtacagcgaa
cacctggagggaaccgctaagctggtggagtctgccatccagaccatggatgagcccgaa
atggcagtttttcttcagacggccaaacctctgctgcagaaactgctgcagtccacagaa
acgtctcacctggataaagtccagcctggatacgagaacatggaacacttcacggtgaac
tttgagcctcagaggcaggcgctggcaattgttgacttcatcaaacttgatgaagatgat
gatgacagcgaagaagaggtggaagcaagtgggccacagccgcagtttgcacctgcagca
gccaatcagcagcccccactggcacctccctcagccacgccccctcacaaaccgtcagag
accccctcgccatcatcactgccatccactcaggccccgccccctctacctctccccact
gccagctccccccagtcagaacagcaaagtgagctggagaacaaagatggacccaaacat
gtcttctcattcagctggctcaaccaaaagtaa
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