Girardinichthys multiradiatus (darkedged splitfin): 124869372
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Entry
124869372 CDS
T08099
Symbol
dcp1a
Name
(RefSeq) mRNA-decapping enzyme 1A isoform X1
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124869372 (dcp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124869372 (dcp1a)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124869372 (dcp1a)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124869372 (dcp1a)
mRNA degradation factors
5'-3' decay
Decapping complex
124869372 (dcp1a)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124869372 (dcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
124869372
NCBI-ProteinID:
XP_047223122
LinkDB
All DBs
Position
1:17747721..17764282
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AA seq
488 aa
AA seq
DB search
METSTAGHMMSLAALQRQDPYINKLLDVTGQVALYNFNSKVNEWEKTEIEGTLFVYSRSA
SPHHGFTIMNRLSTANLVEPINKDLEFQLQDPFLLYRNGNLGIYSIWFYDKRDCQRIAQL
MVKIVKQEADHALRKTPERLDPGRTNGVAEPRPIDILELLSKAKEEYQRAQGGETEVSAE
SNVKTCISRAPEPVHSSHPAEKSSHSMVKQITVEELFGSPLPKEPPAQNTISSSDLSNTY
IMKQSHPAATHQSPLLTQQFSTHDPGSSQQPHGPGPIPTPYTLNPSPVFKSAVPMPDLQS
NCSVSPLLMAPGSSEHHSTFTGPTASSAAFLGQDMVNSLKPSAPSVHSGIHRPILAPSFL
PSTLVPPHSFQEPKKDVFSQPSNLIAPMSAIPMSPGLAVPGSVASVLLSPSAFQQTMNKT
TAVPVVPSGPPDPSPASGRTAEPLQAPCSKTQLQETLIHLIKNDSDFLGAIHVAYLQSVS
KDFTNMKL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggagacttcaactgcgggacatatgatgagcttagctgctctgcagagacaagacccg
tacataaacaagctgctggatgttaccggtcaggtagctctctacaacttcaactccaaa
gtgaacgaatgggagaagacagaaatcgagggaactctgtttgtttattcaaggtctgcc
tcccctcaccatggcttcaccatcatgaatcgactgagtacagcgaacctcgtggagccg
ataaataaagatctagagttccagctgcaggatcccttcctgctctacaggaatggcaac
ttgggtatctatagtatttggttctatgacaagcgggactgtcaacgcatcgcccagctg
atggtcaagattgtgaaacaagaagcggaccacgcccttagaaagaccccagagaggctg
gatccagggagaaccaatggagttgcagaacctcggcccatcgacatcctggagctgctc
agtaaagccaaggaggaataccagagggcccagggtggagaaacagaagtgtctgcagag
tcaaatgtgaaaacttgcatcagcagagctccagaacctgtacacagctcccatccagct
gaaaagagctctcattcgatggtgaagcagatcactgttgaggagctcttcggttctccg
ctccctaaagaacctcctgcacagaacaccatttcttccagtgacctctcaaacacttac
atcatgaaacaatcacatcctgctgcaactcaccaaagtccactcctcacacagcaattc
tcaacccatgatcctggctctagccagcaaccacatggacctggtccaatccctactcct
tacacgctaaatcccagtcctgtcttcaaatcggcggttcccatgccagacctccagtct
aactgctcagtgtcccctctcctgatggctccaggaagctcagagcatcacagtaccttc
actggacccacagcatcttcagctgcctttttgggacaagacatggttaactctctcaaa
ccatcagctccatctgtacattcaggcatacacagacccattctcgcacccagcttcctg
ccaagcacactggtaccgcctcatagcttccaagagcccaagaaggatgttttctctcag
ccttccaacctgatcgcaccaatgtctgctattcctatgagccctggtcttgcggttcca
ggctctgtcgcttcagtgctactatctcccagcgcctttcaacagaccatgaataaaacc
acagcagtaccagtggtgccgtctggtcctccagatccatcacctgcttctggaagaact
gcagagcctctgcaggccccctgcagtaaaacacagctccaggagacgttgatacatctt
attaagaatgactcggacttccttggtgccattcatgtcgcttaccttcagagcgtatcc
aaggacttcaccaacatgaagctgtag
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