Girardinichthys multiradiatus (darkedged splitfin): 124869910
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Entry
124869910 CDS
T08099
Symbol
tpra
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124869910 (tpra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124869910 (tpra)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124869910 (tpra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Nucleoprot-TPR
GAS
Motif
Other DBs
NCBI-GeneID:
124869910
NCBI-ProteinID:
XP_047224102
LinkDB
All DBs
Position
6:17151681..17187487
Genome browser
AA seq
2497 aa
AA seq
DB search
MAVVLLQALERTELNKLPKGVQNKLEKFVTDLQNANEALKTQHERFKADSEQQYFDVEKR
LTESQEQILSATKDLQILKEENKKLSEELSTLKGIEGETSEDKQPQQQTKAKYEIEAEKR
ELARLLEKRTQEVENLTEDMKRLNEKLTDTNKVKVELQLKLDEIQSSAASVQYREKRMEQ
EKELLEKKIEWLTAELSTKTEELLSTNREKGKEILELQGSLESSNEQVSRLECQLTSLKE
LSDSQSKRAEDLNNKLKQAKDEQFAMEEKYRIELNAHVKLSSLYKGAATEMEKKNQELSR
AVEELSKLVKETGEANKGLEKKVSDAEQQKVRLEAELKEKIKKMEKELENATMKAAGKQC
CGSSLTEEQLDSMCPSAAAITAIVKPGMKFFDLYNAYAECQTQLQLEKQETRRVSKVLDE
IVQEVESKAPVLKRQREEYESMQRSMASLCNKLEQARTEIYSLQKEKDEAKQRCDAMERD
KLKTERQLEDTSAQLCNLLVELEEARGTRVSKDDGSSSDISSTSEVNGSSRLSFRSVMEL
QRQNQSLLGRLREIEEEKGKEQARETTAHITELESIVDKLQKEVEQLREQRNQQKQLADS
SARQRDMFKALLTQSTGFSLPPQGQESSPRPSAPATRSTPQRAAAAESAQTAHAKAALKQ
LNDAFTLYKKEKAENDRMLNETNDRLQRQLTELRSSHAKLTSQLDFSNKRYEILQETVSA
YRREIAALQKRNQNMAATAQRHEHIIHTTIHDLRKANEKLALEQVRVENLSKERDMLRQV
ECRLSKEKEAVLTEQRNQNLLLTNLKTIQLSMERTETETRQRLNNKIERLEAELASMKTK
LEEEVAQRHALGRTMDAQLLEAKKQLETQTILLQKTRELLSGAEQQVTTLKAQLASASSS
EAAAASTNVTTPATRAAGLRVPLRAHTPAASQQLSQSEQELSELKAQLRSAEEQNSELTE
QLKNANATVEQYRSVVLTLEDSLKREKESRSPLVVRLKASEEVQKQLEKKILEVEKLKQQ
EVDEKRKAVDAVEKQVFELQRSLKASQAEQQEALERAAAAVTQEQKATQDSLLQTKLAGE
AQAKYERELMLHAADVEALQQLKKTSQQEAARKRELEEELKKTTSLLLEKTATWSATEKR
LKEALSSLKSRFEELGKQNALLHQQMDEMATRSRQPQQQQLDLSFSEEGKTTEQILEILR
FVRQEKEIAVARCEASDGEALRYKQRVEHQDRELKELQEALNAERERMQLTSKTLCEQQE
QLKKMESISALQENIRMLKMDRDKLEQELQQAQAKVTKLQSDIAPLHNSLSILSEKNGSL
QADKRLLEDDLKRWKAKVQHLVSQQKEGDAEEKQKVSVEKEAQQKRITLLAEETAKLKTE
LVRSNASSNSAQSQLQGLKDSVVRLTSEKDNLKKELEAKNNDILEKSRTITQVKKIGRRY
KTQYEELKAQHDKLVSENSGNEEQKKTQEELNTLKQEIQKKLEEAQKSQQELEAAQKENQ
QTKEKLQDLQTQLTQNQNQLTQVQSQLSQTQNQLQQNQSQLALNLKELEQAQTQTQQLQT
KLKSVQCLAQARQNQMQQMQKELQQAKETLQQNLAKQKELQQTNQATQQSHNQEVNDLKT
ALSQTENKATELQGQLDSLRKTVSEREAEVKLLKEQVTEAKQAFEASQAAQATQSSQSTQ
ASDSTAAGDVSQALQDELTELREELSESKNKEEQLKQQMAEKEEKTKKAILGAKLKISQV
NSAKEQLSQENEELKQSKEELEVRMNALKSQYEGRLLRLDRELRELRETQAHSDGREEAL
DQSGAKLEDQPRSLDQRQMSLKCPAQDRGSLSTSEPPTANIRPTPSTPSPSNKPSPSTGS
KATPRASIRPMVTPATVPIATATVMPTTQTESQEALISTGASVHSNSSALMNTSTSLTQP
TSTQATAFVQPTQQQAASQEAGSSMEAERPSTSSSSSPFMSATGPKRSRENEEEEEDSRP
ESSQTPPSTKKLRLKPTIALQMEGDEELDGELRDAGDQQVSPDDSQELPEEGFQVLAVDM
DEEDEGVSQSVPSDQGSQGLAFIRDVIVIDTDSESRESKDWDQRVEEEEEEEEEEEEEEE
DEEEEAAGEQEEENEDDDDDDAADSGMRGGEEHNEESQEASEEREEENTSEGTNTEENVS
EAPTSSQHPSDPSQSGEGTRGGTDLGASKDSLHHPPTCSTTHSPSSSSLTPRLPQTRRPP
HVLPPRLYIQAPAPELGPPHTQRQSSQLRRPSSGRGPQLTPGLASMPFFDDDDRMVPSTP
TLVVPHRTDGFAEAIHSPQVAGLSTRFRFGPPEDLLQQTPASHSDLGQLASQGGLGMYES
PLFLAAHDEDGGGRSVPTTPLQVAAPVTVFTESMPSDSGDNMASQSVPMVTASTGMAAAA
DDGDEVFMEQEGEGPGIETSLDSQTDLESAGQQSDDASLPSTSQDPDTSSVSQPRSVTSQ
PLMSILLGRGRAGRFLSRRGTIPRGGRGGAAGKGGVA
NT seq
7494 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgtcttgctgcaggccctcgagcggacggagttgaacaaactcccgaaaggt
gttcagaacaagttggagaagtttgtaacggacctgcagaatgctaacgaggcgttgaag
acgcagcatgagcggttcaaagcagacagcgagcaacaatattttgatgttgagaagaga
ctgacagagagccaagaacagatcctttctgccacaaaagacctgcagatcctgaaagag
gagaataaaaaactaagtgaagaactgagcactctgaagggaatagagggtgagaccagt
gaagataaacaaccacaacagcaaaccaaggcaaagtatgaaattgaggcggagaagaga
gagctggcgagactgctggagaagagaacgcaggaggtggagaacctgacggaggacatg
aaacgtttgaatgagaagctgacggacaccaacaaagtaaaggtggagctccagctaaag
ctggatgagatacagtcatctgcagcctcagtgcagtaccgagagaaacgaatggagcag
gagaaagagctgttggagaagaaaattgagtggttaacggcagagctgtcgacaaaaacc
gaggagttactgagcaccaacagagagaagggcaaagagatcctggagctgcagggcagt
ctggagagcagcaacgagcaggtgagcaggctggagtgtcagctcacctctctgaaggaa
ctcagtgacagccagagtaaaagagccgaggacctcaataacaaactgaagcaggcaaag
gatgaacagtttgctatggaggagaaataccgcattgagctcaacgcccatgtcaagctg
tcatcactctataagggtgcagcaactgagatggagaagaagaaccaggagctgagcaga
gcagtggaagagctcagcaagctggttaaagagacaggagaagctaataaggggctggag
aagaaagtttcagacgctgaacagcaaaaagtacggcttgaggcggaacttaaagagaag
ataaagaaaatggagaaggagctggaaaatgcaacaatgaaggctgcaggcaaacagtgc
tgcgggtcttctttgacagaagaacagctggactccatgtgtccgtcagcggctgccatc
actgcaattgtcaagcctggcatgaagtttttcgatctatataatgcttatgcagagtgt
cagacccagctgcagcttgagaagcaagagacgaggagggtgagcaaggtcctggatgag
atagtccaggaggtggagtccaaagctcctgtgctcaagcgacaaagagaggagtatgag
agcatgcagaggtcaatggcttctctgtgcaacaaactggaacaagctcgaactgaaatc
tacagtctgcaaaaagagaaggatgaggccaagcagagatgtgatgccatggagagagac
aaactaaagaccgagcgacaactagaggatacatctgcacagctctgcaatcttctagtt
gagttggaggaagcacggggtactcgggtgtccaaagacgacggcagctcctcggatatt
tccagcacctctgaggtaaacggctcaagccggctgtcgtttcgcagcgttatggagctc
cagagacagaaccaaagcctgcttggaagactacgagagatagaggaagagaagggcaaa
gagcaagccagggaaacaacagcacatataacagaactggagtctattgtggataaactc
cagaaggaggtggagcagctgagagaacagaggaaccaacagaaacagcttgcagactcc
agcgctagacagagagacatgttcaaggctctgctgactcagagcacgggcttcagcttg
cctcctcaaggtcaagagtcttctccccgtccttctgccccagctactcgctccactcct
cagagagccgctgctgcagagtcagcccagactgctcatgcaaaagctgctctgaaacag
ctcaatgatgctttcaccttatataagaaggagaaggctgagaatgaccgaatgctgaat
gaaacaaatgaccggctgcagaggcagctgacagagctccgctccagccatgccaaactc
acctctcagctggacttcagtaacaagaggtacgagattcttcaggaaactgtatcggct
taccgcagagagatcgctgctttacagaagaggaaccaaaacatggctgccacagctcag
cgacacgagcacatcatccatacaacgatccacgacctgagaaaggccaatgaaaaatta
gcactggaacaggtgcgtgtggagaacctgagtaaagagagagatatgttacgacaggta
gagtgtcgcctcagtaaagagaaggaagctgttctgactgagcaacgcaaccagaacctg
cttctaaccaacctcaagactatacagttgagtatggagcgtacagagacagagactcgc
cagcgacttaacaacaaaatagagcgactggaggctgaactggcctcaatgaagaccaag
ctggaggaggaggttgcacagagacatgccctcggacgcactatggatgcacagttattg
gaagcaaagaagcagctggagacacaaaccatcttactgcagaagaccagggagctgctg
agtggcgctgagcaacaggtgacgacactgaaagctcagctggcttctgcttcttcctct
gaagctgctgctgcctccaccaacgtgaccaccccggccaccagagctgctggcctccgg
gtaccactgagagcacacaccccagcagcatctcagcagctcagccaatcagagcaggag
ctttcagaactgaaggctcaactacgaagtgctgaggaacaaaatagtgaactgacggaa
cagctaaagaacgctaatgccacagttgaacagtaccgatctgtggttctaactctggaa
gacagtttaaagagagaaaaggagtcacgctctcctctggtggtccgactgaaggcgtcg
gaggaggtgcagaagcagctggagaagaagattttagaggtggagaaattgaagcagcag
gaggtggatgagaaaaggaaggctgtggatgctgtggagaaacaggtgttcgagctgcag
cgcagtctgaaggccagtcaggcagaacaacaggaggccctggagagagctgctgctgcg
gttacacaggaacagaaagccacacaggacagtctgttacagactaagctagctggagag
gcgcaggctaagtatgagcgagagttgatgcttcatgctgctgatgtggaggctctgcaa
cagctgaagaaaacatcccagcaagaagcagcgcgcaagagggagttggaagaagaactg
aagaaaactacttccctcctgctggagaaaactgcaacctggagcgcaacggagaaacga
ctaaaggaagcactgtccagtctgaaatcccgttttgaggaactgggaaaacagaatgct
ctcctgcaccagcagatggatgaaatggccactaggagtcgccagccgcagcagcagcag
ctggacctgtcatttagtgaggaggggaagaccactgaacagatactggagatactcagg
tttgtgcgtcaggagaaggagattgctgttgctcgttgcgaggcatctgatggagaggct
cttcgctacaaacagcgagtcgagcaccaagacagagaactgaaggagctacaggaagct
ctaaatgctgagagggagaggatgcagttgacaagcaagactctgtgtgagcagcaggaa
cagctgaagaagatggagagtatcagtgctctccaagaaaacatcaggatgctgaaaatg
gacagagataagctggaacaggaacttcagcaggctcaggctaaagtaacaaagctacag
tcagacattgcccccctgcataactctctgtctatactgtcggagaaaaatggctccctg
caggccgataagaggctgctggaagacgatctcaagcgctggaaggctaaagttcaacac
ctggttagccaacagaaagagggggacgctgaggaaaaacagaaagtcagcgttgaaaaa
gaggcccagcaaaaacgcataacactgctagctgaagagacagctaagctgaagacggag
ctggtcagatccaatgccagcagtaattcagctcagtcccagcttcaaggtctcaaagac
tctgtggtccgattgacatcagaaaaagataatcttaagaaagagctggaagccaaaaat
aatgacattttggagaagagcaggaccatcactcaggtgaagaagattggacgccgatac
aagactcaatacgaggagctcaaagcccagcatgacaagctggtcagtgaaaattctgga
aatgaggagcagaagaagacccaagaggaactaaataccttgaagcaggagattcagaaa
aaactggaggaggctcagaaatcccagcaggagttggaggcggctcagaaggaaaaccag
cagaccaaggaaaagcttcaggatctccaaacccagctgacacagaaccagaaccagctg
acacaggtccagtcccaactctctcagacccagaatcagctgcagcagaatcagagccag
ctggctctaaatctgaaagaacttgagcaagcccagacccaaactcagcagctacagact
aagttaaaatccgtccagtgtctggctcaggcccgacagaaccagatgcagcagatgcag
aaggagcttcagcaggctaaagagaccctccagcagaaccttgctaaacagaaggagctt
cagcagaccaaccaggcaactcagcagagccacaatcaggaggtgaatgacttaaagact
gctttgagtcaaactgaaaacaaggcgactgagcttcaaggccaactggacagcctgcgg
aagactgtttctgaacgtgaagcagaggttaagcttctgaaagagcaagtaactgaagct
aagcaagcgtttgaagctagccaagcagcacaggccacccagagttcccagtctacccag
gccagtgactctacagctgctggtgatgtcagccaggcactacaagatgagctgactgaa
ctcagagaggagctctctgagagtaagaacaaagaagagcagctcaaacagcagatggct
gaaaaagaggagaagactaaaaaggccatccttggagccaaacttaaaatcagccaagtg
aacagtgcgaaggagcagctcagtcaggagaatgaagaactgaaacagagcaaggaggag
ctggaggtcagaatgaacgccctcaagtctcagtatgaaggaagacttcttcgactggac
cgagagctgagggaactgagagagacacaagcgcactctgacgggagggaagaagctctg
gaccagagtggagcaaagctggaggatcagcccagatctttagaccagagacagatgtct
ttgaagtgtcctgctcaagacaggggaagcctcagcacttctgagcctcccactgccaac
attcggcccactccaagtactccgtcacccagtaacaagccaagtccatccaccggtagc
aaggccacccctcgtgccagcatcaggcccatggttacacctgcaacagtccccatagca
acagccacagtgatgcccactacacagacagaaagtcaagaggcactcatcagtacagga
gcttctgtacactccaacagctctgctctaatgaacacttccacctccttaactcagcca
actagcactcaggccaccgccttcgttcagcccactcagcagcaggcagccagtcaggag
gcaggttccagcatggaggcagaacgtccatcaacatcttcctcttcctccccctttatg
tctgcaacaggtccgaagcgaagcagagaaaacgaagaggaggaagaggatagtcgacct
gagagttcccaaactcctccaagcacaaaaaaactgaggctgaaaccaacaattgctctg
cagatggaaggtgatgaagagctggacggagagctcagggacgcgggagatcaacaggtt
tctcctgatgacagtcaggagctcccagaagaaggtttccaggtattggctgtagacatg
gatgaggaggacgaaggtgtctcccagtctgtcccttctgaccagggctcccagggcttg
gctttcattcgagacgttattgtgatcgatacagacagtgaaagccgggagagcaaagac
tgggaccagagagtggaggaagaagaagaagaggaggaggaggaagaagaagaggaggag
gacgaggaagaagaggcagcaggagagcaggaagaagaaaatgaagatgatgacgatgat
gatgctgctgacagcgggatgaggggtggagaggagcataacgaggaaagtcaagaagct
tcagaggagagagaggaagagaatacttcagagggtaccaacactgaggagaatgtgagt
gaagcccccacaagctcccagcatccctcagacccctcacaaagtggagaaggcacacgt
ggagggacagatctgggagcttctaaagactccctacaccaccccccaacctgctccact
acacactccccctcctcatcctccctaacgccccggttgccccagacacgcaggcctcca
cacgtactgccgcctcggctctatattcaggctccggctcctgaactgggacccccacac
acacagagacagtcttctcagctgcgtagaccatcatcaggacgtggacctcaactaacc
cctggattagcctctatgccattctttgatgacgatgacagaatggttcctagtactcct
actctggtagtcccacaccgcactgatggttttgctgaggctatacattcaccccaggta
gcaggcctgtccacaagattcaggtttggacctccagaagatttgctgcagcagacacca
gcttcacattctgacctgggacagctggcttctcaaggaggtttgggtatgtatgaatct
cctcttttcctggctgctcacgatgaagatggcggtgggaggagtgtccccaccacacct
ttacaggtggctgcaccagtgacagtctttacagagagcatgccctctgacagtggcgac
aacatggcttctcagtccgttcccatggtgactgcctcaactgggatggctgctgctgct
gatgatggagatgaggttttcatggagcaggaaggagaaggcccaggtattgaaacgtct
ctggacagccagacggacctggagtcagcaggccagcaaagtgatgacgcctcactgcca
tctacaagccaagacccagacaccagcagtgttagtcagcctcgttcagtaacaagccag
cctctgatgagcatcctcttaggcagaggcagagctggaaggttcctcagtcgcagagga
accattcctcgaggaggacgaggaggagcagcaggaaaagggggtgtggcctaa
DBGET
integrated database retrieval system
