Girardinichthys multiradiatus (darkedged splitfin): 124869990
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Entry
124869990 CDS
T08099
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124869990 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124869990 (gtf2b)
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
124869990 (gtf2b)
Prokaryotic type
Archaeal type
TFB
124869990 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
BRF2-like_C_cyclin_rpt
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
124869990
NCBI-ProteinID:
XP_047224282
LinkDB
All DBs
Position
6:6164188..6183380
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AA seq
318 aa
AA seq
DB search
MASTSRGEALALPRVQCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE
KALKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEISTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAE
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagtcgtggagaagccttggccttacccagagttcagtgtcccaaccat
cctgatgccatactggtggaggactacagagcaggagacatgatttgtcctgaatgcggc
cttgttgtcggcgatcgtgttattgatgtgggatcagagtggaggacgttttctaatgag
aaagctctcaaagatccatccagagtgggagatgcccagaacccactgctcaatggagga
gacctgaccaccatgatcagcaagggaacaggtgcagccagttttgatgaatttggcaac
tcaaagtatcagaaccgccggaccatgagcagctctgaccgggccatgctgaatgccttt
aaagagatcagcactatggcagatcgtatcaacctgccaaggaacattgtagacagaacg
aacaacttattcaagcaggtttatgaacaaaagagtctgaaggggcgagccaacgatgcc
atcgcctcagcctgtctctacatcgcctgcagacaagagggggtaccaaggacttttaaa
gagatctgtgctgtctccaggatctcaaagaaagagattggtaggtgcttcaaactgatc
ctgaaagcgctggagaccagtgtggatctcatcaccacgggcgatttcatgtcccgcttc
tgctccaacctcggcttgcctaaacaggtgcagatggcagctacgttcatcgccaggaaa
gctgtagagctcgacctggtgcctggcaggagccccatctccgtggctgctgcagccatt
tacatggcctcccaggcctctgctgagaagaagacccagaaagaaatcggagatatcgcc
ggcgttgcagacgtcaccatcagacagtcgtaccgactcatctatccacgtgcagcagag
cttttccctccagacttcaagtttgacacgcctgttgataaactgcctcaactgtaa
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