Girardinichthys multiradiatus (darkedged splitfin): 124870021
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Entry
124870021 CDS
T08099
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124870021 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmu01009
]
124870021 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124870021 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
gmu03029
]
124870021 (rb1cc1)
Protein phosphatases and associated proteins [BR:
gmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124870021 (rb1cc1)
Membrane trafficking [BR:
gmu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
124870021 (rb1cc1)
Mitochondrial biogenesis [BR:
gmu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
124870021 (rb1cc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Lant_leader_dom
Motif
Other DBs
NCBI-GeneID:
124870021
NCBI-ProteinID:
XP_047224342
LinkDB
All DBs
Position
6:complement(27579823..27600466)
Genome browser
AA seq
1616 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKTAVQHQVLVVNGGECMAADRRVC
SYSAGTETNPIFLFNKEMILSDRDPTIQKTTFSIESEIQVKVEESLLLPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIIANLEDCTLSYQKLLVKFNTAYTNYQQ
DLEEIKIKLSKLGTSVSVMARIPLLECLTRHSYRESIEKCISTPEKDSDETEEENSTDSV
LCKIQAQMASKSSASLSASGTATCEPEGDQETNEMTESGGLRAALFDDDAPELVCQSSFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLADCRDTIAKLDNQNMKSIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELIERVRV
VDALSTVPQMYCLAVVEVVRRKMFMRHYREWANALVKDGKRLYEAEKFKRESFGKLFRKS
FLRNRLFKGLESWPPTSFCTRKPRRFDDELPDISLDDLQYLKSCCPVEVQPFLMIPAMCD
FEPLNHHVETLHKLVQAAQSVDEMSQTITDLLSEQRASCSQSAQRSTAQTPQSERKPGTT
TPVPSKTPLSLSLQGPGCQPLHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGS
LDLDSLAESPESDFMSAVNEFVIEENLTSPNPISDPTSPEMMVESLYSSVINAIDNRRMQ
DTTTLERENSRIAELKKVLEKYRCAAEESHSNLRSVKNDLYYFRGLVLKEHQDFGLALRS
MATEMHSTVEEIYQSHKIEINEQHKGELLTVRQELEKQAQALTEENQVNQSIVRDVQRAM
LELEGLMERKEKELTQMENERQRWVEKEGNLADKIKNLEQINGDQTEEIKTLSTLKESFT
CQLENLHFEIERSQQKIRQELEAVSQCHLKELEDKLKQEHKMELDSLNKNNKEAQERLTV
ENGTKLTEAADHHATAINEKDVQIKEMEARLTELAELRCRLEVELALKESETEEVRILFE
EAKMQQAEAVKTQVEAETKVLKDELTDLKRQLQAKNEEYEVDLAELRTLMRMEKDHCISE
LVDRHEEETILLHGKISVLQQHSQDVERNHAEQQETLREELHHQLAVLSEDKEKQLRSFQ
ELEQELRTVINNLQAENDLLSKNLEQERHAAQKEEASNVVAPDAFKELEQQKEEMEKRLL
EKISQLENELHEKQSSKSDEGLLLHAEGRADAGAPLSLDSALQEHLQQERASLQAQIELL
EKKKNEEIQNLKTSLIAEQQTNFNTVLTREKLKKEQIINDLTEKLQNVTQQQEKDKALIE
TLSEDRASVMQEKKQLEEELNRLRSSALVSSAFFPSTAAQDLSEVGAVARALSVAGACSP
ETPAETDRPASVAAFRDDEHVDSAVDASMMAADDTMMSEEKQRIMLLERTLHMKEEENKR
LSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESL
AALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNRKV
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtatgtgttccaggtcaacaatggcagcacattgacatttgacaccgacctt
gctgtccaaactgtactggagcttaaacatgccattcaagccaaatataagactgcagtt
cagcatcaggtcctcgttgtcaatgggggggaatgtatggctgcggacagaagggtctgc
agttacagtgctggcactgaaaccaaccccatattcctgttcaacaaagagatgatctta
tccgaccgggatccaacaatccaaaaaaccaccttctcgattgagagtgagattcaggtt
aaggtggaagagtcgctactgttgccagctgtctttcacactgttgcctcacgaacacaa
cttgctctggaaatgttcgaagttgccaaaaaactttgctctttctgtgaacgtttggtt
cacgatgagcatctccaacatcaaggctgggcagctatcatagctaacctggaggactgc
actctgtcttatcagaagttactcgtgaagttcaacactgcatacacaaattatcaacag
gacttagaagaaattaaaattaaactttcgaagttagggacttcggtttccgtaatggcc
aggatacctctgctggaatgtttgacaagacacagttacagagagagcatcgagaagtgc
atttcaaccccagagaaggattcagatgagacggaagaagaaaactccaccgactctgtg
ctctgcaagattcaagcccagatggcctccaaatcgtcagcctccttgtctgcttcgggg
acagccacatgtgagccagagggagatcaggagacgaacgaaatgaccgagagtggtggt
ttgagagctgcacttttcgatgatgacgctccagaactcgtctgccagtcttctttcaat
gtgacactattggactggatcaacgtgcaagacagacccaatgatgtggaatcggttgta
aggaagtgctttgactccatcaacaggctcgaccctcggatcatccagcccttcctggca
gattgtcgtgacacaattgcaaagctagataatcagaacatgaaatccatcaaagggctt
gaagacaggttgtatgctctagaccaaatgattgcaagctgtaagaagttggtgaatgag
cagaaagaacttgctcagggttttttggccaatcagaagcgagctgaaaacctgaaggat
acatctgttttgcctgacttgtgtctgagtcacaccaaccagctgatgatcatgctgaac
aaccacaggaagctgctagacattaaaaagaagtgtaccactgccaaacaggagctagca
aacaaccttcaagtccgactcaaatggtgctgctacgtcatgcttcacgcagatcaagat
ggggaaaagctccaggctcttctccgacttctaacagagctaatagagagagtcagggtg
gtggacgccctcagtactgtgccccagatgtactgcttggcagtcgtggaagttgtccgg
agaaaaatgttcatgcgacactacagagagtgggccaacgcacttgttaaggatggaaaa
cgactgtatgaggcagaaaagttcaaaagggaatcctttggaaagctcttcaggaagtct
tttctccgaaatcgattgtttaaaggacttgaatcctggcctccaacttcattttgtacg
cggaaacccagaaggtttgatgatgaacttccagacatctcacttgatgacctgcagtac
ttgaaatcatgttgtcctgtcgaggtccagcctttcctaatgattcccgccatgtgtgac
tttgagcccttaaaccaccatgtagagacacttcataagctggtccaagctgcacagagt
gtggatgaaatgtctcaaactatcactgacctactgagtgaacaaagagcatcctgtagt
cagagcgcccaaagatcaacggcacaaactccacagtctgagagaaagcccgggaccacg
actccggtgccctccaaaacgcctctctctcttagccttcaaggacccggctgccagccc
ctacacgtacccgtcccagctcctttagaggatctatccccagacagcattgatgcacaa
acgtttgacttcgaaaccataggtcatccaaacatggatccggtcctgcagcagggatcc
ctggacttggattctctcgccgaaagccctgaatctgactttatgtctgctgtcaacgag
tttgtgattgaggagaacctgacctctcctaatcccatcagtgaccccactagccccgaa
atgatggtggagtcgctgtactcctcagtcattaacgccattgacaacagacgaatgcag
gacaccacaacgctggagagggagaactcaaggattgctgaactgaaaaaagttcttgag
aagtacagatgtgctgcagaagagtcccactccaacttaagaagtgtgaagaatgacctc
tattacttcagaggtttagtcctaaaagagcatcaggattttgggttagctctgcgcagc
atggccacagagatgcacagtactgttgaagaaatctaccagagccacaaaatagagata
aatgagcagcataaaggggagcttctcactgttcggcaggagctagagaagcaggctcag
gcgctgacagaagaaaaccaagtaaaccagagtattgtaagagatgtccaacgcgccatg
ctggagctggagggactcatggagcgcaaagagaaggaacttacacagatggagaatgag
agacagcgatgggttgaaaaagagggaaacctcgctgataagataaaaaatcttgagcag
atcaacggtgatcagactgaagaaatcaagacactctcaactttaaaagaatctttcacc
tgccagcttgaaaacctgcattttgagattgaacgcagtcagcagaagattcgacaggag
ctggaagcagtctctcagtgccatttaaaagagttggaggataaattgaagcaggaacac
aaaatggaactggatagcctgaataagaataacaaggaggctcaggaacgtctcactgtt
gaaaatggtacaaaattaaccgaggcagctgatcaccacgctaccgccattaatgagaag
gatgttcaaattaaagaaatggaagctcggcttacggagctcgcagagctccgctgtaga
ctagaggttgagttggccctcaaagagtccgagacagaagaggtgaggatcttatttgaa
gaagccaagatgcagcaggcagaagctgtaaagacccaagtggaggctgagaccaaagtc
cttaaagatgagctgacggatctcaagaggcagcttcaagctaaaaatgaggagtatgaa
gttgatctagcagagctgaggactctcatgaggatggaaaaggaccactgcatctcagag
ctggtggacaggcacgaggaggagactattctgttgcatggtaaaatctctgtgctacaa
cagcactcccaggatgttgagagaaaccatgcagagcaacaggagacgcttagagaggag
ttacatcatcaacttgctgttctgagtgaagacaaagaaaagcagttaaggagtttccag
gaacttgagcaggaattgaggactgttatcaacaatttgcaagcagagaacgacctgctc
tctaaaaacctagagcaggaaagacatgcagctcaaaaggaggaagcctcaaacgttgta
gcgccagatgccttcaaagagttggagcagcagaaggaggagatggagaagagactttta
gaaaaaattagccaacttgagaatgagcttcatgagaaacagtcttctaaaagtgatgaa
gggttgttgctgcatgctgagggccgtgcagatgctggagcacctctgtccctagactcc
gccttacaggagcacctgcagcaggagagggcctctctgcaggcccagattgagctctta
gagaagaaaaaaaatgaagagatacagaacctcaaaacatcactgatcgcagaacagcag
acaaacttcaacaccgttctaacaagagaaaagttgaagaaggagcagattatcaacgac
ctcacagagaagttacaaaacgttacccagcagcaggaaaaggacaaagctctgatagag
acgctgtctgaggaccgagcaagtgtgatgcaggagaaaaaacagttggaagaagaactt
aaccgtctccgcagctctgcgttagtctcttcagccttcttcccctccaccgcagctcaa
gatctctcagaagttggagccgtagcgagagctctgtctgttgcaggggcttgttctcct
gagaccccggctgaaacagaccgaccagcctccgtagcggccttcagggatgacgaacat
gttgactcagcagtggacgccagcatgatggctgctgatgacacaatgatgtcggaagag
aaacagcggataatgttacttgagaggactttgcacatgaaggaagaagaaaacaagcgc
ctcagccagcgactgatgtctcaaagcatgtcctctgtgtcatcacggcattcagacaaa
atcgccatcagagatttccaggtcggcgatttggttctaatcatcctggatgaaaggcat
gacaactacgtgctgttcacagtgggtcccaccctctactttctgcactcagagtctctc
gctgcactggaccttaaaccagcatcagggacctcaagacggccatgggtgctcggaaag
gtgatggagaaggaatattgccaggcaaaaaaggcccagaacagattcaaggttccttta
ggaaccaagttctacagagtgaaagctgttccatggaacaggaaagtctga
DBGET
integrated database retrieval system
